RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
E2F1-201ENST00000343380 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
E2F1-201ENST00000343380 ANKRD30BQ9BXX2 1392 aa29.02■■■□□ 2.24
E2F1-201ENST00000343380 MRS2Q9HD23 443 aa29.01■■■□□ 2.23
E2F1-201ENST00000343380 ERCC6Q03468 1493 aa29■■■□□ 2.23
E2F1-201ENST00000343380 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
E2F1-201ENST00000343380 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
E2F1-201ENST00000343380 IQGAP2Q13576 1575 aa28.98■■■□□ 2.23
E2F1-201ENST00000343380 WDR62O43379 1518 aa28.97■■■□□ 2.23
E2F1-201ENST00000343380 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
E2F1-201ENST00000343380 FANCIQ9NVI1 1328 aa28.96■■■□□ 2.23
E2F1-201ENST00000343380 PPP4R2Q9NY27 417 aa28.96■■■□□ 2.23
E2F1-201ENST00000343380 TEX14Q8IWB6 1497 aa28.96■■■□□ 2.23
E2F1-201ENST00000343380 KIF7Q2M1P5 1343 aa28.95■■■□□ 2.23
E2F1-201ENST00000343380 DAPK1P53355 1430 aa28.94■■■□□ 2.22
E2F1-201ENST00000343380 SPATA31E1Q6ZUB1 1445 aa28.92■■■□□ 2.22
E2F1-201ENST00000343380 BCL11AQ9H165 835 aa28.92■■■□□ 2.22
E2F1-201ENST00000343380 ABCC5O15440 1437 aa28.92■■■□□ 2.22
E2F1-201ENST00000343380 ERICH6BQ5W0A0 696 aa28.91■■■□□ 2.22
E2F1-201ENST00000343380 ZBED9Q6R2W3 1325 aa28.91■■■□□ 2.22
E2F1-201ENST00000343380 B4GALNT3Q6L9W6 998 aa28.9■■■□□ 2.22
E2F1-201ENST00000343380 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
E2F1-201ENST00000343380 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
E2F1-201ENST00000343380 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
E2F1-201ENST00000343380 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
E2F1-201ENST00000343380 CNGB1Q14028 1251 aaPredicted RBP28.83■■■□□ 2.21
E2F1-201ENST00000343380 DNMT1P26358 1616 aaKnown RBP28.82■■■□□ 2.2
E2F1-201ENST00000343380 NUP153P49790 1475 aaKnown RBP28.76■■■□□ 2.2
E2F1-201ENST00000343380 PZPP20742 1482 aa28.75■■■□□ 2.19
E2F1-201ENST00000343380 DHX29Q7Z478 1369 aaKnown RBP28.74■■■□□ 2.19
E2F1-201ENST00000343380 DISP1Q96F81 1524 aa28.73■■■□□ 2.19
E2F1-201ENST00000343380 SENP3-EIF4A1A0A087X0R7 540 aa28.72■■■□□ 2.19
E2F1-201ENST00000343380 POLR3GLQ9BT43 218 aa28.72■■■□□ 2.19
E2F1-201ENST00000343380 ZNF326Q5BKZ1 582 aaKnown RBP28.71■■■□□ 2.19
E2F1-201ENST00000343380 POLR1AO95602 1720 aaPredicted RBP28.71■■■□□ 2.19
E2F1-201ENST00000343380 ERICH6Q7L0X2 663 aa28.7■■■□□ 2.19
E2F1-201ENST00000343380 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
E2F1-201ENST00000343380 KIAA0556O60303 1618 aa28.67■■■□□ 2.18
E2F1-201ENST00000343380 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
E2F1-201ENST00000343380 BCORL1Q5H9F3 1711 aa28.67■■■□□ 2.18
E2F1-201ENST00000343380 USP47Q96K76 1375 aa28.66■■■□□ 2.18
E2F1-201ENST00000343380 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
E2F1-201ENST00000343380 SMG6Q86US8 1419 aaKnown RBP28.63■■■□□ 2.17
E2F1-201ENST00000343380 CFDP1Q9UEE9 299 aaPredicted RBP28.63■■■□□ 2.17
E2F1-201ENST00000343380 CAMSAP2Q08AD1 1489 aa28.62■■■□□ 2.17
E2F1-201ENST00000343380 KIAA0586Q9BVV6 1533 aa28.62■■■□□ 2.17
E2F1-201ENST00000343380 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
E2F1-201ENST00000343380 PKD2Q13563 968 aa28.62■■■□□ 2.17
E2F1-201ENST00000343380 RAPGEF6Q8TEU7 1601 aa28.61■■■□□ 2.17
E2F1-201ENST00000343380 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
E2F1-201ENST00000343380 IFT140Q96RY7 1462 aa28.58■■■□□ 2.17
E2F1-201ENST00000343380 NUDCQ9Y266 331 aa28.58■■■□□ 2.17
E2F1-201ENST00000343380 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
E2F1-201ENST00000343380 GPATCH8Q9UKJ3 1502 aaKnown RBP28.55■■■□□ 2.16
E2F1-201ENST00000343380 RNF123Q5XPI4 1314 aa28.54■■■□□ 2.16
E2F1-201ENST00000343380 KDM5CP41229 1560 aa28.52■■■□□ 2.16
E2F1-201ENST00000343380 PNISRQ8TF01 805 aaKnown RBP28.52■■■□□ 2.16
E2F1-201ENST00000343380 PLB1Q6P1J6 1458 aa28.52■■■□□ 2.16
E2F1-201ENST00000343380 KIF14Q15058 1648 aa28.5■■■□□ 2.15
E2F1-201ENST00000343380 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
E2F1-201ENST00000343380 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
E2F1-201ENST00000343380 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
E2F1-201ENST00000343380 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
E2F1-201ENST00000343380 PAK3O75914 559 aaPredicted RBP28.46■■■□□ 2.15
E2F1-201ENST00000343380 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.14
E2F1-201ENST00000343380 ANKRD30AQ9BXX3 1397 aa28.44■■■□□ 2.14
E2F1-201ENST00000343380 TMC1Q8TDI8 760 aa28.44■■■□□ 2.14
E2F1-201ENST00000343380 CARD11Q9BXL7 1154 aa28.44■■■□□ 2.14
E2F1-201ENST00000343380 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
E2F1-201ENST00000343380 KDM2AQ9Y2K7 1162 aa28.41■■■□□ 2.14
E2F1-201ENST00000343380 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
E2F1-201ENST00000343380 UHRF1BP1Q6BDS2 1440 aa28.41■■■□□ 2.14
E2F1-201ENST00000343380 NUP155O75694 1391 aa28.41■■■□□ 2.14
E2F1-201ENST00000343380 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
E2F1-201ENST00000343380 NOP58Q9Y2X3 529 aaKnown RBP28.4■■■□□ 2.14
E2F1-201ENST00000343380 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
E2F1-201ENST00000343380 RALGAPBQ86X10 1494 aa28.4■■■□□ 2.14
E2F1-201ENST00000343380 ROCK2O75116 1388 aaKnown RBP28.36■■■□□ 2.13
E2F1-201ENST00000343380 LRPPRCP42704 1394 aaKnown RBP28.34■■■□□ 2.13
E2F1-201ENST00000343380 KIF15Q9NS87 1388 aa28.34■■■□□ 2.13
E2F1-201ENST00000343380 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
E2F1-201ENST00000343380 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
E2F1-201ENST00000343380 NBR1Q14596 966 aa28.31■■■□□ 2.12
E2F1-201ENST00000343380 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
E2F1-201ENST00000343380 CEP170Q5SW79 1584 aa28.3■■■□□ 2.12
E2F1-201ENST00000343380 DEKP35659 375 aaKnown RBP28.3■■■□□ 2.12
E2F1-201ENST00000343380 C9orf84Q5VXU9 1444 aa28.3■■■□□ 2.12
E2F1-201ENST00000343380 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
E2F1-201ENST00000343380 FBLN2P98095 1184 aa28.28■■■□□ 2.12
E2F1-201ENST00000343380 MYBBP1AQ9BQG0 1328 aaKnown RBP28.28■■■□□ 2.12
E2F1-201ENST00000343380 ARHGEF12Q9NZN5 1544 aa28.27■■■□□ 2.12
E2F1-201ENST00000343380 SALL2Q9Y467 1007 aaPredicted RBP28.27■■■□□ 2.12
E2F1-201ENST00000343380 BRD4O60885 1362 aaPredicted RBP28.26■■■□□ 2.11
E2F1-201ENST00000343380 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.11
E2F1-201ENST00000343380 JPH4Q96JJ6 628 aa28.24■■■□□ 2.11
E2F1-201ENST00000343380 PLEKHD1A6NEE1 506 aa28.23■■■□□ 2.11
E2F1-201ENST00000343380 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.119e-8■□□□□ 8.5
E2F1-201ENST00000343380 ABCC10Q5T3U5 1492 aa28.23■■■□□ 2.11
E2F1-201ENST00000343380 IPO9Q96P70 1041 aaKnown RBP28.23■■■□□ 2.11
E2F1-201ENST00000343380 RALBP1Q15311 655 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms