RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PKD2Q13563 968 aa16.14■□□□□ 0.18
SSX2IP-201ENST00000342203 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
SSX2IP-201ENST00000342203 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
SSX2IP-201ENST00000342203 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
SSX2IP-201ENST00000342203 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
SSX2IP-201ENST00000342203 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
SSX2IP-201ENST00000342203 KIF21BO75037 1637 aa16.12■□□□□ 0.17
SSX2IP-201ENST00000342203 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
SSX2IP-201ENST00000342203 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
SSX2IP-201ENST00000342203 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
SSX2IP-201ENST00000342203 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
SSX2IP-201ENST00000342203 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
SSX2IP-201ENST00000342203 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
SSX2IP-201ENST00000342203 GOLGA6L3A6NEY3 463 aa16.09■□□□□ 0.17
SSX2IP-201ENST00000342203 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
SSX2IP-201ENST00000342203 PHLDB1Q86UU1 1377 aa16.09■□□□□ 0.17
SSX2IP-201ENST00000342203 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.16
SSX2IP-201ENST00000342203 RALBP1Q15311 655 aa16.08■□□□□ 0.16
SSX2IP-201ENST00000342203 NLRP13Q86W25 1043 aa16.07■□□□□ 0.16
SSX2IP-201ENST00000342203 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
SSX2IP-201ENST00000342203 ST20-MTHFSA0A0A6YYL1 179 aa16.06■□□□□ 0.16
SSX2IP-201ENST00000342203 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
SSX2IP-201ENST00000342203 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
SSX2IP-201ENST00000342203 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
SSX2IP-201ENST00000342203 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
SSX2IP-201ENST00000342203 CCDC7Q96M83 1385 aa16.05■□□□□ 0.16
SSX2IP-201ENST00000342203 MS4A1P11836 297 aa16.04■□□□□ 0.16
SSX2IP-201ENST00000342203 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
SSX2IP-201ENST00000342203 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
SSX2IP-201ENST00000342203 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
SSX2IP-201ENST00000342203 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
SSX2IP-201ENST00000342203 MSNP26038 577 aaKnown RBP16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 MFAP1P55081 439 aaKnown RBP16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 TMF1P82094 1093 aa16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
SSX2IP-201ENST00000342203 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
SSX2IP-201ENST00000342203 ARAP1Q96P48 1450 aa16■□□□□ 0.15
SSX2IP-201ENST00000342203 GOLGA2Q08379 1002 aa16■□□□□ 0.15
SSX2IP-201ENST00000342203 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
SSX2IP-201ENST00000342203 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
SSX2IP-201ENST00000342203 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
SSX2IP-201ENST00000342203 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
SSX2IP-201ENST00000342203 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
SSX2IP-201ENST00000342203 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
SSX2IP-201ENST00000342203 CDCA8Q53HL2 280 aa15.96■□□□□ 0.15
SSX2IP-201ENST00000342203 ROCK2O75116 1388 aaKnown RBP15.96■□□□□ 0.15
SSX2IP-201ENST00000342203 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
SSX2IP-201ENST00000342203 USP47Q96K76 1375 aa15.95■□□□□ 0.14
SSX2IP-201ENST00000342203 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
SSX2IP-201ENST00000342203 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
SSX2IP-201ENST00000342203 KIF15Q9NS87 1388 aa15.94■□□□□ 0.14
SSX2IP-201ENST00000342203 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
SSX2IP-201ENST00000342203 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
SSX2IP-201ENST00000342203 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
SSX2IP-201ENST00000342203 C11orf95C9JLR9 678 aaPredicted RBP15.92■□□□□ 0.14
SSX2IP-201ENST00000342203 NUP155O75694 1391 aa15.92■□□□□ 0.14
SSX2IP-201ENST00000342203 PANK3Q9H999 370 aa15.92■□□□□ 0.14
SSX2IP-201ENST00000342203 NBPF8Q3BBV2 869 aa15.91■□□□□ 0.14
SSX2IP-201ENST00000342203 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SSX2IP-201ENST00000342203 GBP4Q96PP9 640 aa15.9■□□□□ 0.14
SSX2IP-201ENST00000342203 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
SSX2IP-201ENST00000342203 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
SSX2IP-201ENST00000342203 RRP7AQ9Y3A4 280 aaKnown RBP15.89■□□□□ 0.13
SSX2IP-201ENST00000342203 PKNOX2Q96KN3 472 aa15.88■□□□□ 0.13
SSX2IP-201ENST00000342203 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
SSX2IP-201ENST00000342203 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
SSX2IP-201ENST00000342203 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 APBB1O00213 710 aa15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 APAF1O14727 1248 aa15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 ITPRIPQ8IWB1 547 aa15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
SSX2IP-201ENST00000342203 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
SSX2IP-201ENST00000342203 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
SSX2IP-201ENST00000342203 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
SSX2IP-201ENST00000342203 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.13
SSX2IP-201ENST00000342203 POGKQ9P215 609 aa15.82■□□□□ 0.12
SSX2IP-201ENST00000342203 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 IGF1RP08069 1367 aa15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 FAM13BQ9NYF5 915 aa15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 SMG6Q86US8 1419 aaKnown RBP15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSX2IP-201ENST00000342203 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
SSX2IP-201ENST00000342203 FOXD4L5Q5VV16 416 aaPredicted RBP15.8■□□□□ 0.12
SSX2IP-201ENST00000342203 FOXD4L4Q8WXT5 416 aaPredicted RBP15.8■□□□□ 0.12
SSX2IP-201ENST00000342203 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
SSX2IP-201ENST00000342203 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
SSX2IP-201ENST00000342203 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
SSX2IP-201ENST00000342203 DDX49Q9Y6V7 483 aaKnown RBP15.79■□□□□ 0.12
SSX2IP-201ENST00000342203 CALD1Q05682 793 aaKnown RBP15.78■□□□□ 0.12
SSX2IP-201ENST00000342203 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
SSX2IP-201ENST00000342203 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
SSX2IP-201ENST00000342203 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
SSX2IP-201ENST00000342203 SAFB2Q14151 953 aaKnown RBP eCLIP15.78■□□□□ 0.12
SSX2IP-201ENST00000342203 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms