RNA–Protein interactions for RNA: ENST00000342020.5

CTSL-202, Transcript of cathepsin L, humanhuman

TSL 2 BASIC

Gene CTSL, Length 933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-202ENST00000342020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
CTSL-202ENST00000342020 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
CTSL-202ENST00000342020 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
CTSL-202ENST00000342020 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
CTSL-202ENST00000342020 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CTSL-202ENST00000342020 CEBPAP49715 358 aaPredicted RBP21.56■■□□□ 1.04
CTSL-202ENST00000342020 ATP10AO60312 1499 aa21.52■■□□□ 1.04
CTSL-202ENST00000342020 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
CTSL-202ENST00000342020 SETD1BQ9UPS6 1966 aaKnown RBP21.51■■□□□ 1.03
CTSL-202ENST00000342020 C9orf84Q5VXU9 1444 aa21.5■■□□□ 1.03
CTSL-202ENST00000342020 PTPRTO14522 1441 aa21.48■■□□□ 1.03
CTSL-202ENST00000342020 UHRF1BP1Q6BDS2 1440 aa21.48■■□□□ 1.03
CTSL-202ENST00000342020 PLCH2O75038 1416 aa21.46■■□□□ 1.03
CTSL-202ENST00000342020 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
CTSL-202ENST00000342020 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
CTSL-202ENST00000342020 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
CTSL-202ENST00000342020 IQSEC2Q5JU85 1478 aa21.4■■□□□ 1.02
CTSL-202ENST00000342020 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
CTSL-202ENST00000342020 EFCAB2Q5VUJ9 269 aa21.36■■□□□ 1.01
CTSL-202ENST00000342020 C3P01024 1663 aa21.35■■□□□ 1.01
CTSL-202ENST00000342020 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
CTSL-202ENST00000342020 KDM5CP41229 1560 aa21.33■■□□□ 1.01
CTSL-202ENST00000342020 NCOA1Q15788 1441 aa21.33■■□□□ 1.01
CTSL-202ENST00000342020 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
CTSL-202ENST00000342020 AFAP1Q8N556 730 aa21.32■■□□□ 1
CTSL-202ENST00000342020 DIP2CQ9Y2E4 1556 aa21.31■■□□□ 1
CTSL-202ENST00000342020 REREQ9P2R6 1566 aa21.31■■□□□ 1
CTSL-202ENST00000342020 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
CTSL-202ENST00000342020 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
CTSL-202ENST00000342020 KIF14Q15058 1648 aa21.25■□□□□ 0.99
CTSL-202ENST00000342020 AGLP35573 1532 aa21.24■□□□□ 0.99
CTSL-202ENST00000342020 UBAP1LF5GYI3 381 aa21.23■□□□□ 0.99
CTSL-202ENST00000342020 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
CTSL-202ENST00000342020 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
CTSL-202ENST00000342020 ARHGAP5Q13017 1502 aa21.23■□□□□ 0.99
CTSL-202ENST00000342020 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
CTSL-202ENST00000342020 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
CTSL-202ENST00000342020 ZNF335Q9H4Z2 1342 aaPredicted RBP21.21■□□□□ 0.99
CTSL-202ENST00000342020 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
CTSL-202ENST00000342020 NCKAP5LQ9HCH0 1330 aa21.18■□□□□ 0.98
CTSL-202ENST00000342020 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
CTSL-202ENST00000342020 NPATQ14207 1427 aa21.17■□□□□ 0.98
CTSL-202ENST00000342020 EEA1Q15075 1411 aa21.17■□□□□ 0.98
CTSL-202ENST00000342020 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
CTSL-202ENST00000342020 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
CTSL-202ENST00000342020 CDC42BPBQ9Y5S2 1711 aa21.14■□□□□ 0.97
CTSL-202ENST00000342020 KIDINS220Q9ULH0 1771 aa21.12■□□□□ 0.97
CTSL-202ENST00000342020 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
CTSL-202ENST00000342020 MROH2AA6NES4 1674 aa21.12■□□□□ 0.97
CTSL-202ENST00000342020 ABCC1P33527 1531 aa21.11■□□□□ 0.97
CTSL-202ENST00000342020 MED1Q15648 1581 aaPredicted RBP21.1■□□□□ 0.97
CTSL-202ENST00000342020 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
CTSL-202ENST00000342020 CLIP1P30622 1438 aa21.09■□□□□ 0.97
CTSL-202ENST00000342020 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
CTSL-202ENST00000342020 PLA2R1Q13018 1463 aa21.08■□□□□ 0.97
CTSL-202ENST00000342020 HSPA1LP34931 641 aa21.08■□□□□ 0.97
CTSL-202ENST00000342020 PKD2Q13563 968 aa21.08■□□□□ 0.97
CTSL-202ENST00000342020 TCOF1Q13428 1488 aaKnown RBP21.07■□□□□ 0.96
CTSL-202ENST00000342020 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
CTSL-202ENST00000342020 ZNF142P52746 1687 aaPredicted RBP21.06■□□□□ 0.96
CTSL-202ENST00000342020 MYO3AQ8NEV4 1616 aa21.04■□□□□ 0.96
CTSL-202ENST00000342020 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
CTSL-202ENST00000342020 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
CTSL-202ENST00000342020 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.96
CTSL-202ENST00000342020 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
CTSL-202ENST00000342020 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
CTSL-202ENST00000342020 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
CTSL-202ENST00000342020 SAMD9LQ8IVG5 1584 aa21■□□□□ 0.95
CTSL-202ENST00000342020 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
CTSL-202ENST00000342020 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
CTSL-202ENST00000342020 PIP4K2BP78356 416 aa20.99■□□□□ 0.95
CTSL-202ENST00000342020 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
CTSL-202ENST00000342020 TOM1O60784 492 aa20.95■□□□□ 0.94
CTSL-202ENST00000342020 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
CTSL-202ENST00000342020 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
CTSL-202ENST00000342020 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
CTSL-202ENST00000342020 CPS1P31327 1500 aa20.92■□□□□ 0.94
CTSL-202ENST00000342020 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
CTSL-202ENST00000342020 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
CTSL-202ENST00000342020 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
CTSL-202ENST00000342020 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
CTSL-202ENST00000342020 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
CTSL-202ENST00000342020 ATP7AQ04656 1500 aa20.89■□□□□ 0.94
CTSL-202ENST00000342020 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.94
CTSL-202ENST00000342020 A2MP01023 1474 aa20.88■□□□□ 0.93
CTSL-202ENST00000342020 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
CTSL-202ENST00000342020 NEURL4Q96JN8 1562 aa20.88■□□□□ 0.93
CTSL-202ENST00000342020 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
CTSL-202ENST00000342020 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTSL-202ENST00000342020 GGT6Q6P531 493 aa20.87■□□□□ 0.93
CTSL-202ENST00000342020 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
CTSL-202ENST00000342020 POLR1AO95602 1720 aaPredicted RBP20.86■□□□□ 0.93
CTSL-202ENST00000342020 CCDC18Q5T9S5 1454 aa20.86■□□□□ 0.93
CTSL-202ENST00000342020 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
CTSL-202ENST00000342020 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.93
CTSL-202ENST00000342020 VWDEQ8N2E2 1590 aa20.82■□□□□ 0.92
CTSL-202ENST00000342020 KIAA1107Q9UPP5 1409 aa20.82■□□□□ 0.92
CTSL-202ENST00000342020 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
CTSL-202ENST00000342020 TNRQ92752 1358 aa20.77■□□□□ 0.92
CTSL-202ENST00000342020 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms