RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 ZMYM4Q5VZL5 1548 aa26.89■■□□□ 1.89
H3F3C-201ENST00000340398 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.89
H3F3C-201ENST00000340398 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
H3F3C-201ENST00000340398 KIF14Q15058 1648 aa26.86■■□□□ 1.89
H3F3C-201ENST00000340398 POGZQ7Z3K3 1410 aa26.84■■□□□ 1.89
H3F3C-201ENST00000340398 MAGI2Q86UL8 1455 aa26.84■■□□□ 1.89
H3F3C-201ENST00000340398 LRRIQ1Q96JM4 1722 aa26.83■■□□□ 1.89
H3F3C-201ENST00000340398 TROQ12816 1431 aaPredicted RBP26.82■■□□□ 1.88
H3F3C-201ENST00000340398 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
H3F3C-201ENST00000340398 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
H3F3C-201ENST00000340398 AFAP1Q8N556 730 aa26.81■■□□□ 1.88
H3F3C-201ENST00000340398 HSPA2P54652 639 aa26.8■■□□□ 1.88
H3F3C-201ENST00000340398 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
H3F3C-201ENST00000340398 ATP10AO60312 1499 aa26.77■■□□□ 1.88
H3F3C-201ENST00000340398 ARHGAP5Q13017 1502 aa26.75■■□□□ 1.87
H3F3C-201ENST00000340398 CLIP1P30622 1438 aa26.74■■□□□ 1.87
H3F3C-201ENST00000340398 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
H3F3C-201ENST00000340398 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
H3F3C-201ENST00000340398 CEBPAP49715 358 aaPredicted RBP26.7■■□□□ 1.86
H3F3C-201ENST00000340398 C9orf84Q5VXU9 1444 aa26.7■■□□□ 1.86
H3F3C-201ENST00000340398 CASKIN1Q8WXD9 1431 aa26.7■■□□□ 1.86
H3F3C-201ENST00000340398 FER1L4A9Z1Z3 1794 aa26.69■■□□□ 1.86
H3F3C-201ENST00000340398 CDC42BPBQ9Y5S2 1711 aa26.69■■□□□ 1.86
H3F3C-201ENST00000340398 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
H3F3C-201ENST00000340398 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
H3F3C-201ENST00000340398 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
H3F3C-201ENST00000340398 KDM5CP41229 1560 aa26.63■■□□□ 1.85
H3F3C-201ENST00000340398 CCDC18Q5T9S5 1454 aa26.62■■□□□ 1.85
H3F3C-201ENST00000340398 ZNF777Q9ULD5 760 aaPredicted RBP26.58■■□□□ 1.85
H3F3C-201ENST00000340398 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
H3F3C-201ENST00000340398 DIP2CQ9Y2E4 1556 aa26.57■■□□□ 1.84
H3F3C-201ENST00000340398 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
H3F3C-201ENST00000340398 CDC42BPAQ5VT25 1732 aa26.54■■□□□ 1.84
H3F3C-201ENST00000340398 FYCO1Q9BQS8 1478 aa26.54■■□□□ 1.84
H3F3C-201ENST00000340398 ABCC1P33527 1531 aa26.54■■□□□ 1.84
H3F3C-201ENST00000340398 ABCA6Q8N139 1617 aa26.53■■□□□ 1.84
H3F3C-201ENST00000340398 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
H3F3C-201ENST00000340398 HNRNPMP52272 730 aaKnown RBP eCLIP26.5■■□□□ 1.83
H3F3C-201ENST00000340398 GPATCH8Q9UKJ3 1502 aaKnown RBP26.48■■□□□ 1.83
H3F3C-201ENST00000340398 REREQ9P2R6 1566 aa26.47■■□□□ 1.83
H3F3C-201ENST00000340398 KIDINS220Q9ULH0 1771 aa26.47■■□□□ 1.83
H3F3C-201ENST00000340398 PREX1Q8TCU6 1659 aa26.47■■□□□ 1.83
H3F3C-201ENST00000340398 SETD1BQ9UPS6 1966 aaKnown RBP26.46■■□□□ 1.83
H3F3C-201ENST00000340398 CERKQ8TCT0 537 aa26.45■■□□□ 1.82
H3F3C-201ENST00000340398 ESF1Q9H501 851 aaKnown RBP26.45■■□□□ 1.82
H3F3C-201ENST00000340398 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
H3F3C-201ENST00000340398 AGLP35573 1532 aa26.43■■□□□ 1.82
H3F3C-201ENST00000340398 CFDP1Q9UEE9 299 aaPredicted RBP26.42■■□□□ 1.82
H3F3C-201ENST00000340398 C3P01024 1663 aa26.41■■□□□ 1.82
H3F3C-201ENST00000340398 SPAG9O60271 1321 aaKnown RBP26.4■■□□□ 1.82
H3F3C-201ENST00000340398 UHRF1BP1Q6BDS2 1440 aa26.39■■□□□ 1.82
H3F3C-201ENST00000340398 SYCP2Q9BX26 1530 aa26.39■■□□□ 1.82
H3F3C-201ENST00000340398 STRCQ7RTU9 1775 aa26.38■■□□□ 1.81
H3F3C-201ENST00000340398 CCNB3Q8WWL7 1395 aa26.37■■□□□ 1.81
H3F3C-201ENST00000340398 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
H3F3C-201ENST00000340398 ZNF644Q9H582 1327 aaPredicted RBP26.35■■□□□ 1.81
H3F3C-201ENST00000340398 DMRT2Q9Y5R5 561 aa26.34■■□□□ 1.81
H3F3C-201ENST00000340398 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
H3F3C-201ENST00000340398 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
H3F3C-201ENST00000340398 ZMYM3Q14202 1370 aa26.29■■□□□ 1.8
H3F3C-201ENST00000340398 CNTLNQ9NXG0 1405 aa26.28■■□□□ 1.8
H3F3C-201ENST00000340398 ATP7AQ04656 1500 aa26.28■■□□□ 1.8
H3F3C-201ENST00000340398 PLEKHH2Q8IVE3 1493 aa26.27■■□□□ 1.8
H3F3C-201ENST00000340398 GGT6Q6P531 493 aa26.26■■□□□ 1.79
H3F3C-201ENST00000340398 A2MP01023 1474 aa26.24■■□□□ 1.79
H3F3C-201ENST00000340398 CEP162Q5TB80 1403 aa26.23■■□□□ 1.79
H3F3C-201ENST00000340398 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
H3F3C-201ENST00000340398 INO80Q9ULG1 1556 aaPredicted RBP26.22■■□□□ 1.79
H3F3C-201ENST00000340398 PTPRTO14522 1441 aa26.2■■□□□ 1.78
H3F3C-201ENST00000340398 MBD5Q9P267 1494 aa26.19■■□□□ 1.78
H3F3C-201ENST00000340398 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
H3F3C-201ENST00000340398 PLXNC1O60486 1568 aa26.18■■□□□ 1.78
H3F3C-201ENST00000340398 MROH2AA6NES4 1674 aa26.18■■□□□ 1.78
H3F3C-201ENST00000340398 NPATQ14207 1427 aa26.17■■□□□ 1.78
H3F3C-201ENST00000340398 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
H3F3C-201ENST00000340398 EHBP1L1Q8N3D4 1523 aa26.17■■□□□ 1.78
H3F3C-201ENST00000340398 NCKAP5LQ9HCH0 1330 aa26.15■■□□□ 1.78
H3F3C-201ENST00000340398 NCOA1Q15788 1441 aa26.15■■□□□ 1.78
H3F3C-201ENST00000340398 CAMSAP1Q5T5Y3 1602 aa26.13■■□□□ 1.77
H3F3C-201ENST00000340398 ADGBQ8N7X0 1667 aa26.11■■□□□ 1.77
H3F3C-201ENST00000340398 PTPRKQ15262 1439 aa26.11■■□□□ 1.77
H3F3C-201ENST00000340398 RTEL1-TNFRSF6BF6WH68 1400 aa26.09■■□□□ 1.77
H3F3C-201ENST00000340398 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
H3F3C-201ENST00000340398 NCOA2Q15596 1464 aa26.09■■□□□ 1.77
H3F3C-201ENST00000340398 DHX29Q7Z478 1369 aaKnown RBP26.08■■□□□ 1.77
H3F3C-201ENST00000340398 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
H3F3C-201ENST00000340398 KIF3BO15066 747 aa26.07■■□□□ 1.76
H3F3C-201ENST00000340398 FBXO31Q5XUX0 539 aaPredicted RBP26.04■■□□□ 1.76
H3F3C-201ENST00000340398 CAMSAP2Q08AD1 1489 aa26.04■■□□□ 1.76
H3F3C-201ENST00000340398 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
H3F3C-201ENST00000340398 MYO3AQ8NEV4 1616 aa26.02■■□□□ 1.76
H3F3C-201ENST00000340398 CCDC141Q6ZP82 1450 aa26.01■■□□□ 1.75
H3F3C-201ENST00000340398 ZNF335Q9H4Z2 1342 aaPredicted RBP26.01■■□□□ 1.75
H3F3C-201ENST00000340398 CEP170BQ9Y4F5 1589 aaPredicted RBP25.99■■□□□ 1.75
H3F3C-201ENST00000340398 PKD2Q13563 968 aa25.99■■□□□ 1.75
H3F3C-201ENST00000340398 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
H3F3C-201ENST00000340398 ZNF142P52746 1687 aaPredicted RBP25.97■■□□□ 1.75
H3F3C-201ENST00000340398 TSPY4P0CV99 314 aa25.97■■□□□ 1.75
H3F3C-201ENST00000340398 TSPY10P0CW01 314 aa25.97■■□□□ 1.75
H3F3C-201ENST00000340398 WASHC2CQ9Y4E1 1318 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms