RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 DAPK1P53355 1430 aa31.59■■■□□ 2.65
VRK2-201ENST00000340157 ABCC5O15440 1437 aa31.58■■■□□ 2.65
VRK2-201ENST00000340157 NAIPQ13075 1403 aa31.55■■■□□ 2.64
VRK2-201ENST00000340157 MYO5CQ9NQX4 1742 aa31.54■■■□□ 2.64
VRK2-201ENST00000340157 GCC2Q8IWJ2 1684 aa31.54■■■□□ 2.64
VRK2-201ENST00000340157 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
VRK2-201ENST00000340157 AKNAQ7Z591 1439 aa31.51■■■□□ 2.63
VRK2-201ENST00000340157 ZNF777Q9ULD5 760 aaPredicted RBP31.5■■■□□ 2.63
VRK2-201ENST00000340157 WDR7Q9Y4E6 1490 aa31.5■■■□□ 2.63
VRK2-201ENST00000340157 SAMD9LQ8IVG5 1584 aa31.5■■■□□ 2.63
VRK2-201ENST00000340157 CHIC2Q9UKJ5 165 aa31.5■■■□□ 2.63
VRK2-201ENST00000340157 KCNH8Q96L42 1107 aa31.49■■■□□ 2.63
VRK2-201ENST00000340157 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
VRK2-201ENST00000340157 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
VRK2-201ENST00000340157 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
VRK2-201ENST00000340157 RRP7BPQ9NSQ0 103 aa31.43■■■□□ 2.62
VRK2-201ENST00000340157 ROCK1Q13464 1354 aa31.43■■■□□ 2.62
VRK2-201ENST00000340157 ASXL2Q76L83 1435 aa31.42■■■□□ 2.62
VRK2-201ENST00000340157 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
VRK2-201ENST00000340157 ARHGAP5Q13017 1502 aa31.42■■■□□ 2.62
VRK2-201ENST00000340157 KDM6BO15054 1643 aa31.42■■■□□ 2.62
VRK2-201ENST00000340157 CLSPNQ9HAW4 1339 aa31.4■■■□□ 2.62
VRK2-201ENST00000340157 MBD5Q9P267 1494 aa31.39■■■□□ 2.62
VRK2-201ENST00000340157 MAPKBP1O60336 1514 aa31.39■■■□□ 2.62
VRK2-201ENST00000340157 ARHGEF5Q12774 1597 aa31.39■■■□□ 2.62
VRK2-201ENST00000340157 PLCH2O75038 1416 aa31.38■■■□□ 2.61
VRK2-201ENST00000340157 ABCA9Q8IUA7 1624 aa31.37■■■□□ 2.61
VRK2-201ENST00000340157 ADGRL2O95490 1459 aa31.35■■■□□ 2.61
VRK2-201ENST00000340157 SHANK2Q9UPX8 1470 aa31.34■■■□□ 2.61
VRK2-201ENST00000340157 SYCP2Q9BX26 1530 aa31.33■■■□□ 2.61
VRK2-201ENST00000340157 NCOA1Q15788 1441 aa31.31■■■□□ 2.6
VRK2-201ENST00000340157 ARAP3Q8WWN8 1544 aa31.31■■■□□ 2.6
VRK2-201ENST00000340157 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.6
VRK2-201ENST00000340157 NPM1P06748 294 aaKnown RBP eCLIP31.29■■■□□ 2.6
VRK2-201ENST00000340157 C9orf84Q5VXU9 1444 aa31.27■■■□□ 2.6
VRK2-201ENST00000340157 CCDC141Q6ZP82 1450 aa31.27■■■□□ 2.6
VRK2-201ENST00000340157 ARHGEF12Q9NZN5 1544 aa31.26■■■□□ 2.59
VRK2-201ENST00000340157 KIAA1107Q9UPP5 1409 aa31.25■■■□□ 2.59
VRK2-201ENST00000340157 CYB5RLQ6IPT4 315 aa31.25■■■□□ 2.59
VRK2-201ENST00000340157 PLEKHH2Q8IVE3 1493 aa31.24■■■□□ 2.59
VRK2-201ENST00000340157 ABCC1P33527 1531 aa31.24■■■□□ 2.59
VRK2-201ENST00000340157 ANKRD30AQ9BXX3 1397 aa31.21■■■□□ 2.59
VRK2-201ENST00000340157 EFCAB2Q5VUJ9 269 aa31.2■■■□□ 2.58
VRK2-201ENST00000340157 MAST1Q9Y2H9 1570 aa31.19■■■□□ 2.58
VRK2-201ENST00000340157 RSPH4AQ5TD94 716 aa31.16■■■□□ 2.58
VRK2-201ENST00000340157 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
VRK2-201ENST00000340157 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
VRK2-201ENST00000340157 DENND4BO75064 1496 aaPredicted RBP31.15■■■□□ 2.58
VRK2-201ENST00000340157 FANCAO15360 1455 aa31.14■■■□□ 2.57
VRK2-201ENST00000340157 TRAPPC8Q9Y2L5 1435 aa31.1■■■□□ 2.57
VRK2-201ENST00000340157 ANKRD50Q9ULJ7 1429 aa31.08■■■□□ 2.57
VRK2-201ENST00000340157 PLXNC1O60486 1568 aa31.07■■■□□ 2.57
VRK2-201ENST00000340157 KIF15Q9NS87 1388 aa31.07■■■□□ 2.56
VRK2-201ENST00000340157 TRIM52Q96A61 297 aa31.06■■■□□ 2.56
VRK2-201ENST00000340157 CD109Q6YHK3 1445 aa31.03■■■□□ 2.56
VRK2-201ENST00000340157 SIN3AQ96ST3 1273 aa31.02■■■□□ 2.56
VRK2-201ENST00000340157 ACIN1Q9UKV3 1341 aaKnown RBP31■■■□□ 2.55
VRK2-201ENST00000340157 ADGRL1O94910 1474 aa31■■■□□ 2.55
VRK2-201ENST00000340157 PZPP20742 1482 aa30.99■■■□□ 2.55
VRK2-201ENST00000340157 MPHOSPH9Q99550 1183 aa30.99■■■□□ 2.55
VRK2-201ENST00000340157 MAP3K4Q9Y6R4 1608 aa30.97■■■□□ 2.55
VRK2-201ENST00000340157 CFAP74Q9C0B2 1584 aa30.97■■■□□ 2.55
VRK2-201ENST00000340157 ZFYVE16Q7Z3T8 1539 aa30.96■■■□□ 2.55
VRK2-201ENST00000340157 GLI2P10070 1586 aa30.95■■■□□ 2.55
VRK2-201ENST00000340157 SCAPERQ9BY12 1400 aa30.94■■■□□ 2.54
VRK2-201ENST00000340157 AFAP1Q8N556 730 aa30.94■■■□□ 2.54
VRK2-201ENST00000340157 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
VRK2-201ENST00000340157 KDM5DQ9BY66 1539 aa30.91■■■□□ 2.54
VRK2-201ENST00000340157 DIP2BQ9P265 1576 aa30.91■■■□□ 2.54
VRK2-201ENST00000340157 NEUROD1Q13562 356 aa30.91■■■□□ 2.54
VRK2-201ENST00000340157 RTEL1-TNFRSF6BF6WH68 1400 aa30.9■■■□□ 2.54
VRK2-201ENST00000340157 DUOX2Q9NRD8 1548 aa30.9■■■□□ 2.54
VRK2-201ENST00000340157 SPAG9O60271 1321 aaKnown RBP30.88■■■□□ 2.53
VRK2-201ENST00000340157 ATP7AQ04656 1500 aa30.87■■■□□ 2.53
VRK2-201ENST00000340157 UNC13BO14795 1591 aa30.86■■■□□ 2.53
VRK2-201ENST00000340157 FOXD1Q16676 465 aa30.85■■■□□ 2.53
VRK2-201ENST00000340157 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
VRK2-201ENST00000340157 NEO1Q92859 1461 aa30.84■■■□□ 2.53
VRK2-201ENST00000340157 ERBINQ96RT1 1412 aa30.82■■■□□ 2.52
VRK2-201ENST00000340157 NUP155O75694 1391 aa30.81■■■□□ 2.52
VRK2-201ENST00000340157 KIDINS220Q9ULH0 1771 aa30.81■■■□□ 2.52
VRK2-201ENST00000340157 ANKRD30BQ9BXX2 1392 aa30.81■■■□□ 2.52
VRK2-201ENST00000340157 ZNF518AQ6AHZ1 1483 aa30.81■■■□□ 2.52
VRK2-201ENST00000340157 KDM5CP41229 1560 aa30.8■■■□□ 2.52
VRK2-201ENST00000340157 POGZQ7Z3K3 1410 aa30.8■■■□□ 2.52
VRK2-201ENST00000340157 TIMELESSQ9UNS1 1208 aa30.78■■■□□ 2.52
VRK2-201ENST00000340157 PPRC1Q5VV67 1664 aaKnown RBP30.76■■■□□ 2.51
VRK2-201ENST00000340157 MAGI2Q86UL8 1455 aa30.76■■■□□ 2.51
VRK2-201ENST00000340157 FAM135AQ9P2D6 1515 aa30.75■■■□□ 2.51
VRK2-201ENST00000340157 FAM69CQ0P6D2 419 aa30.74■■■□□ 2.51
VRK2-201ENST00000340157 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
VRK2-201ENST00000340157 IQGAP3Q86VI3 1631 aa30.73■■■□□ 2.51
VRK2-201ENST00000340157 TSPOAP1O95153 1857 aa30.72■■■□□ 2.51
VRK2-201ENST00000340157 PKD2Q13563 968 aa30.72■■■□□ 2.51
VRK2-201ENST00000340157 RICTORQ6R327 1708 aa30.7■■■□□ 2.51
VRK2-201ENST00000340157 TONSLQ96HA7 1378 aa30.7■■■□□ 2.51
VRK2-201ENST00000340157 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
VRK2-201ENST00000340157 RPRD2Q5VT52 1461 aaKnown RBP30.68■■■□□ 2.5
VRK2-201ENST00000340157 DEPDC5O75140 1603 aa30.67■■■□□ 2.5
VRK2-201ENST00000340157 MLH3Q9UHC1 1453 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms