RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 ADGBQ8N7X0 1667 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 ARHGEF5Q12774 1597 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 WDR7Q9Y4E6 1490 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 MSH5O43196 834 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 MYT1Q01538 1121 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 ABCC2Q92887 1545 aa7.54□□□□□ -1.2
MSL1-201ENST00000339569 CARMIL2Q6F5E8 1435 aa7.53□□□□□ -1.2
MSL1-201ENST00000339569 CFAP74Q9C0B2 1584 aa7.52□□□□□ -1.2
MSL1-201ENST00000339569 GLI2P10070 1586 aa7.52□□□□□ -1.21
MSL1-201ENST00000339569 PREX2Q70Z35 1606 aa7.52□□□□□ -1.21
MSL1-201ENST00000339569 SHANK2Q9UPX8 1470 aa7.51□□□□□ -1.21
MSL1-201ENST00000339569 PAXIP1Q6ZW49 1069 aaPredicted RBP7.51□□□□□ -1.21
MSL1-201ENST00000339569 EPRSP07814 1512 aaKnown RBP7.51□□□□□ -1.21
MSL1-201ENST00000339569 DCAF8L1A6NGE4 600 aa7.51□□□□□ -1.21
MSL1-201ENST00000339569 TDRD9Q8NDG6 1382 aaKnown RBP7.51□□□□□ -1.21
MSL1-201ENST00000339569 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
MSL1-201ENST00000339569 NUP153P49790 1475 aaKnown RBP7.49□□□□□ -1.21
MSL1-201ENST00000339569 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
MSL1-201ENST00000339569 ABCA9Q8IUA7 1624 aa7.49□□□□□ -1.21
MSL1-201ENST00000339569 ADGRL2O95490 1459 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 FAM135AQ9P2D6 1515 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 CDC42BPAQ5VT25 1732 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 NEURL4Q96JN8 1562 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 PKD2Q13563 968 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 ABCC10Q5T3U5 1492 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 PLXNC1O60486 1568 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 MAPKBP1O60336 1514 aa7.48□□□□□ -1.21
MSL1-201ENST00000339569 KIF14Q15058 1648 aa7.47□□□□□ -1.21
MSL1-201ENST00000339569 KDM5DQ9BY66 1539 aa7.47□□□□□ -1.21
MSL1-201ENST00000339569 CLSPNQ9HAW4 1339 aa7.47□□□□□ -1.21
MSL1-201ENST00000339569 IGSF3O75054 1194 aa7.47□□□□□ -1.21
MSL1-201ENST00000339569 ZCCHC11Q5TAX3 1644 aaKnown RBP7.47□□□□□ -1.21
MSL1-201ENST00000339569 MYO5CQ9NQX4 1742 aa7.46□□□□□ -1.22
MSL1-201ENST00000339569 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
MSL1-201ENST00000339569 MAGI3Q5TCQ9 1506 aa7.45□□□□□ -1.22
MSL1-201ENST00000339569 ROCK1Q13464 1354 aa7.44□□□□□ -1.22
MSL1-201ENST00000339569 EIF2AK4Q9P2K8 1649 aaKnown RBP7.44□□□□□ -1.22
MSL1-201ENST00000339569 FBXO3Q9UK99 471 aa7.44□□□□□ -1.22
MSL1-201ENST00000339569 TROQ12816 1431 aaPredicted RBP7.44□□□□□ -1.22
MSL1-201ENST00000339569 PLEKHH2Q8IVE3 1493 aa7.44□□□□□ -1.22
MSL1-201ENST00000339569 CDC42BPBQ9Y5S2 1711 aa7.43□□□□□ -1.22
MSL1-201ENST00000339569 REREQ9P2R6 1566 aa7.43□□□□□ -1.22
MSL1-201ENST00000339569 MYOM3Q5VTT5 1437 aa7.42□□□□□ -1.22
MSL1-201ENST00000339569 UACAQ9BZF9 1416 aa7.42□□□□□ -1.22
MSL1-201ENST00000339569 KIAA1107Q9UPP5 1409 aa7.41□□□□□ -1.22
MSL1-201ENST00000339569 MAP3K4Q9Y6R4 1608 aa7.41□□□□□ -1.22
MSL1-201ENST00000339569 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
MSL1-201ENST00000339569 ILDR1Q86SU0 546 aaPredicted RBP7.4□□□□□ -1.22
MSL1-201ENST00000339569 UNC13BO14795 1591 aa7.4□□□□□ -1.23
MSL1-201ENST00000339569 NCOA2Q15596 1464 aa7.4□□□□□ -1.23
MSL1-201ENST00000339569 MAGI2Q86UL8 1455 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 FHOD3Q2V2M9 1422 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 ATP10BO94823 1461 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 FGD6Q6ZV73 1430 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 PHLDB1Q86UU1 1377 aa7.39□□□□□ -1.23
MSL1-201ENST00000339569 ARID3AQ99856 593 aa7.38□□□□□ -1.23
MSL1-201ENST00000339569 PRG4Q92954 1404 aaPredicted RBP7.37□□□□□ -1.23
MSL1-201ENST00000339569 INO80Q9ULG1 1556 aaPredicted RBP7.37□□□□□ -1.23
MSL1-201ENST00000339569 HFM1A2PYH4 1435 aa7.36□□□□□ -1.23
MSL1-201ENST00000339569 RTEL1-TNFRSF6BF6WH68 1400 aa7.36□□□□□ -1.23
MSL1-201ENST00000339569 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
MSL1-201ENST00000339569 KDM5CP41229 1560 aa7.36□□□□□ -1.23
MSL1-201ENST00000339569 ZMYM4Q5VZL5 1548 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 CCNB3Q8WWL7 1395 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 C1orf115Q9H7X2 142 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 ABCC1P33527 1531 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.35□□□□□ -1.23
MSL1-201ENST00000339569 RNF17Q9BXT8 1623 aaKnown RBP7.35□□□□□ -1.23
MSL1-201ENST00000339569 CNKSR2Q8WXI2 1034 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 CHMP4AQ9BY43 222 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 PLB1Q6P1J6 1458 aa7.35□□□□□ -1.23
MSL1-201ENST00000339569 NBR1Q14596 966 aa7.34□□□□□ -1.23
MSL1-201ENST00000339569 IFNLR1Q8IU57 520 aaPredicted RBP7.34□□□□□ -1.23
MSL1-201ENST00000339569 KIF13AQ9H1H9 1805 aa7.34□□□□□ -1.23
MSL1-201ENST00000339569 VWDEQ8N2E2 1590 aa7.34□□□□□ -1.23
MSL1-201ENST00000339569 GPATCH8Q9UKJ3 1502 aaKnown RBP7.34□□□□□ -1.23
MSL1-201ENST00000339569 ZC3H13Q5T200 1668 aaKnown RBP7.34□□□□□ -1.24
MSL1-201ENST00000339569 SAMD9LQ8IVG5 1584 aa7.33□□□□□ -1.24
MSL1-201ENST00000339569 JPH4Q96JJ6 628 aa7.33□□□□□ -1.24
MSL1-201ENST00000339569 TEX14Q8IWB6 1497 aa7.33□□□□□ -1.24
MSL1-201ENST00000339569 ZEB1P37275 1124 aaPredicted RBP7.33□□□□□ -1.24
MSL1-201ENST00000339569 RSPH4AQ5TD94 716 aa7.33□□□□□ -1.24
MSL1-201ENST00000339569 IQGAP3Q86VI3 1631 aa7.33□□□□□ -1.24
MSL1-201ENST00000339569 PTPRGP23470 1445 aa7.32□□□□□ -1.24
MSL1-201ENST00000339569 NEO1Q92859 1461 aa7.32□□□□□ -1.24
MSL1-201ENST00000339569 FAM9AQ8IZU1 332 aaPredicted RBP7.32□□□□□ -1.24
MSL1-201ENST00000339569 LMTK2Q8IWU2 1503 aa7.32□□□□□ -1.24
MSL1-201ENST00000339569 TTC37Q6PGP7 1564 aa7.32□□□□□ -1.24
MSL1-201ENST00000339569 SCAF1Q9H7N4 1312 aaKnown RBP7.31□□□□□ -1.24
MSL1-201ENST00000339569 ATP10AO60312 1499 aa7.31□□□□□ -1.24
MSL1-201ENST00000339569 LAMC1P11047 1609 aa7.31□□□□□ -1.24
MSL1-201ENST00000339569 SAMD1Q6SPF0 538 aaPredicted RBP7.31□□□□□ -1.24
MSL1-201ENST00000339569 CHMP7Q8WUX9 453 aaPredicted RBP7.31□□□□□ -1.24
MSL1-201ENST00000339569 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
MSL1-201ENST00000339569 PPRC1Q5VV67 1664 aaKnown RBP7.31□□□□□ -1.24
MSL1-201ENST00000339569 CDK13Q14004 1512 aaKnown RBP7.3□□□□□ -1.24
MSL1-201ENST00000339569 MBD5Q9P267 1494 aa7.3□□□□□ -1.24
MSL1-201ENST00000339569 PLCH2O75038 1416 aa7.3□□□□□ -1.24
MSL1-201ENST00000339569 ZNF428Q96B54 188 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms