RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
XRCC4-202ENST00000338635 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
XRCC4-202ENST00000338635 ARSIQ5FYB1 569 aa9.33□□□□□ -0.92
XRCC4-202ENST00000338635 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
XRCC4-202ENST00000338635 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
XRCC4-202ENST00000338635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
XRCC4-202ENST00000338635 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
XRCC4-202ENST00000338635 VGFO15240 615 aaPredicted RBP9.3□□□□□ -0.92
XRCC4-202ENST00000338635 SOX12O15370 315 aa9.29□□□□□ -0.92
XRCC4-202ENST00000338635 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
XRCC4-202ENST00000338635 PBX2P40425 430 aa9.25□□□□□ -0.93
XRCC4-202ENST00000338635 KHSRPQ92945 711 aaKnown RBP eCLIP9.25□□□□□ -0.936e-10■■■□□ 17.2
XRCC4-202ENST00000338635 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
XRCC4-202ENST00000338635 MS4A4AQ96JQ5 239 aa9.24□□□□□ -0.93
XRCC4-202ENST00000338635 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
XRCC4-202ENST00000338635 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
XRCC4-202ENST00000338635 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
XRCC4-202ENST00000338635 BCL11BQ9C0K0 894 aaPredicted RBP9.2□□□□□ -0.94
XRCC4-202ENST00000338635 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
XRCC4-202ENST00000338635 RGS20O76081 388 aa9.19□□□□□ -0.94
XRCC4-202ENST00000338635 NLRP6P59044 892 aa9.18□□□□□ -0.94
XRCC4-202ENST00000338635 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
XRCC4-202ENST00000338635 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
XRCC4-202ENST00000338635 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
XRCC4-202ENST00000338635 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.95
XRCC4-202ENST00000338635 STK25O00506 426 aa9.13□□□□□ -0.95
XRCC4-202ENST00000338635 NUDT7P0C024 238 aa9.12□□□□□ -0.95
XRCC4-202ENST00000338635 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
XRCC4-202ENST00000338635 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
XRCC4-202ENST00000338635 PKD2Q13563 968 aa9.09□□□□□ -0.95
XRCC4-202ENST00000338635 RGL2O15211 777 aa9.08□□□□□ -0.96
XRCC4-202ENST00000338635 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
XRCC4-202ENST00000338635 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
XRCC4-202ENST00000338635 HRO43593 1189 aa9.06□□□□□ -0.96
XRCC4-202ENST00000338635 TK2O00142 265 aa9.05□□□□□ -0.96
XRCC4-202ENST00000338635 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
XRCC4-202ENST00000338635 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
XRCC4-202ENST00000338635 KIF3CO14782 793 aa9.02□□□□□ -0.97
XRCC4-202ENST00000338635 A0A0G2JS52 829 aa9□□□□□ -0.97
XRCC4-202ENST00000338635 STAC3Q96MF2 364 aa9□□□□□ -0.97
XRCC4-202ENST00000338635 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
XRCC4-202ENST00000338635 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
XRCC4-202ENST00000338635 PTPN5P54829 565 aa8.98□□□□□ -0.97
XRCC4-202ENST00000338635 Q6ZNB5 142 aa8.98□□□□□ -0.97
XRCC4-202ENST00000338635 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
XRCC4-202ENST00000338635 PPP1R37O75864 691 aa8.97□□□□□ -0.97
XRCC4-202ENST00000338635 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
XRCC4-202ENST00000338635 SLC34A2O95436 690 aa8.95□□□□□ -0.98
XRCC4-202ENST00000338635 PSEN2P49810 448 aa8.95□□□□□ -0.98
XRCC4-202ENST00000338635 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
XRCC4-202ENST00000338635 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
XRCC4-202ENST00000338635 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
XRCC4-202ENST00000338635 FOXK1P85037 733 aa8.83□□□□□ -1
XRCC4-202ENST00000338635 PPP4R3BQ5MIZ7 849 aa8.83□□□□□ -1
XRCC4-202ENST00000338635 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
XRCC4-202ENST00000338635 PLPP6Q8IY26 295 aa8.83□□□□□ -1
XRCC4-202ENST00000338635 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
XRCC4-202ENST00000338635 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
XRCC4-202ENST00000338635 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
XRCC4-202ENST00000338635 KCNH8Q96L42 1107 aa8.82□□□□□ -1
XRCC4-202ENST00000338635 DSG2Q14126 1118 aa8.8□□□□□ -1
XRCC4-202ENST00000338635 KCNK17Q96T54 332 aa8.8□□□□□ -1
XRCC4-202ENST00000338635 TBC1D12O60347 775 aa8.78□□□□□ -1
XRCC4-202ENST00000338635 LCE2BO14633 110 aa8.77□□□□□ -1.01
XRCC4-202ENST00000338635 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
XRCC4-202ENST00000338635 NKX1-1Q15270 411 aaPredicted RBP8.77□□□□□ -1.01
XRCC4-202ENST00000338635 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1.01
XRCC4-202ENST00000338635 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
XRCC4-202ENST00000338635 WNT2BQ93097 391 aa8.76□□□□□ -1.01
XRCC4-202ENST00000338635 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
XRCC4-202ENST00000338635 RYDENQ9NUL5 291 aaKnown RBP8.73□□□□□ -1.01
XRCC4-202ENST00000338635 BHMG1C9JSJ3 638 aaPredicted RBP8.73□□□□□ -1.01
XRCC4-202ENST00000338635 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
XRCC4-202ENST00000338635 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
XRCC4-202ENST00000338635 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
XRCC4-202ENST00000338635 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
XRCC4-202ENST00000338635 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
XRCC4-202ENST00000338635 GFRA3O60609 400 aa8.69□□□□□ -1.02
XRCC4-202ENST00000338635 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
XRCC4-202ENST00000338635 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
XRCC4-202ENST00000338635 PDE4AP27815 886 aa8.66□□□□□ -1.02
XRCC4-202ENST00000338635 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.03
XRCC4-202ENST00000338635 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.03
XRCC4-202ENST00000338635 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
XRCC4-202ENST00000338635 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
XRCC4-202ENST00000338635 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
XRCC4-202ENST00000338635 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
XRCC4-202ENST00000338635 ZBED2Q9BTP6 218 aa8.61□□□□□ -1.03
XRCC4-202ENST00000338635 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
XRCC4-202ENST00000338635 ANO8Q9HCE9 1232 aaPredicted RBP8.61□□□□□ -1.03
XRCC4-202ENST00000338635 FOSBP53539 338 aa8.6□□□□□ -1.03
XRCC4-202ENST00000338635 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
XRCC4-202ENST00000338635 EVI5O60447 810 aa8.59□□□□□ -1.03
XRCC4-202ENST00000338635 KCNC4Q03721 635 aa8.59□□□□□ -1.03
XRCC4-202ENST00000338635 PTPREP23469 700 aa8.58□□□□□ -1.04
XRCC4-202ENST00000338635 DDX27Q96GQ7 796 aaKnown RBP8.58□□□□□ -1.04
XRCC4-202ENST00000338635 DCAF8L2P0C7V8 631 aa8.57□□□□□ -1.04
XRCC4-202ENST00000338635 NRG2O14511 850 aaPredicted RBP8.56□□□□□ -1.04
XRCC4-202ENST00000338635 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
XRCC4-202ENST00000338635 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms