RNA–Protein interactions for RNA: ENST00000338581.10

OTOF-202, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-202ENST00000338581 NOC3LQ8WTT2 800 aaKnown RBP17.95■□□□□ 0.46
OTOF-202ENST00000338581 TMF1P82094 1093 aa17.94■□□□□ 0.46
OTOF-202ENST00000338581 GNL2Q13823 731 aaKnown RBP17.92■□□□□ 0.46
OTOF-202ENST00000338581 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
OTOF-202ENST00000338581 CSPP1Q1MSJ5 1256 aa17.92■□□□□ 0.46
OTOF-202ENST00000338581 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
OTOF-202ENST00000338581 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
OTOF-202ENST00000338581 PHF14O94880 888 aa17.91■□□□□ 0.46
OTOF-202ENST00000338581 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
OTOF-202ENST00000338581 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
OTOF-202ENST00000338581 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.46
OTOF-202ENST00000338581 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
OTOF-202ENST00000338581 GSE1Q14687 1217 aa17.89■□□□□ 0.45
OTOF-202ENST00000338581 CFDP1Q9UEE9 299 aaPredicted RBP17.88■□□□□ 0.45
OTOF-202ENST00000338581 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
OTOF-202ENST00000338581 PLEKHG5O94827 1062 aa17.85■□□□□ 0.45
OTOF-202ENST00000338581 POGKQ9P215 609 aa17.84■□□□□ 0.45
OTOF-202ENST00000338581 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
OTOF-202ENST00000338581 MFAP1P55081 439 aaKnown RBP17.84■□□□□ 0.45
OTOF-202ENST00000338581 A0A0U1RQG5 324 aaPredicted RBP17.83■□□□□ 0.44
OTOF-202ENST00000338581 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
OTOF-202ENST00000338581 RALBP1Q15311 655 aa17.81■□□□□ 0.44
OTOF-202ENST00000338581 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
OTOF-202ENST00000338581 HSPA5P11021 654 aaKnown RBP17.81■□□□□ 0.44
OTOF-202ENST00000338581 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
OTOF-202ENST00000338581 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
OTOF-202ENST00000338581 TPM3P06753 285 aa17.8■□□□□ 0.44
OTOF-202ENST00000338581 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
OTOF-202ENST00000338581 GPS2Q13227 327 aa17.79■□□□□ 0.44
OTOF-202ENST00000338581 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
OTOF-202ENST00000338581 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
OTOF-202ENST00000338581 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
OTOF-202ENST00000338581 CLSTN1O94985 981 aa17.78■□□□□ 0.44
OTOF-202ENST00000338581 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
OTOF-202ENST00000338581 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
OTOF-202ENST00000338581 APBB1O00213 710 aa17.77■□□□□ 0.44
OTOF-202ENST00000338581 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.43
OTOF-202ENST00000338581 ST18O60284 1047 aa17.76■□□□□ 0.43
OTOF-202ENST00000338581 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
OTOF-202ENST00000338581 DDX49Q9Y6V7 483 aaKnown RBP17.74■□□□□ 0.43
OTOF-202ENST00000338581 KCNH8Q96L42 1107 aa17.72■□□□□ 0.43
OTOF-202ENST00000338581 CALRP27797 417 aaKnown RBP17.72■□□□□ 0.43
OTOF-202ENST00000338581 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
OTOF-202ENST00000338581 HMMRO75330 724 aa17.72■□□□□ 0.43
OTOF-202ENST00000338581 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
OTOF-202ENST00000338581 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
OTOF-202ENST00000338581 NPHP1O15259 732 aa17.71■□□□□ 0.43
OTOF-202ENST00000338581 PDE4AP27815 886 aa17.71■□□□□ 0.43
OTOF-202ENST00000338581 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
OTOF-202ENST00000338581 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
OTOF-202ENST00000338581 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
OTOF-202ENST00000338581 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
OTOF-202ENST00000338581 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
OTOF-202ENST00000338581 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
OTOF-202ENST00000338581 HDAC5Q9UQL6 1122 aa17.68■□□□□ 0.42
OTOF-202ENST00000338581 FAM13BQ9NYF5 915 aa17.68■□□□□ 0.42
OTOF-202ENST00000338581 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
OTOF-202ENST00000338581 CENPQQ7L2Z9 268 aaPredicted RBP17.68■□□□□ 0.42
OTOF-202ENST00000338581 GPATCH3Q96I76 525 aa17.68■□□□□ 0.42
OTOF-202ENST00000338581 KIF16BQ96L93 1317 aa17.67■□□□□ 0.42
OTOF-202ENST00000338581 GOLGA6L19H0YKK7 550 aa17.67■□□□□ 0.42
OTOF-202ENST00000338581 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
OTOF-202ENST00000338581 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
OTOF-202ENST00000338581 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
OTOF-202ENST00000338581 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
OTOF-202ENST00000338581 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
OTOF-202ENST00000338581 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
OTOF-202ENST00000338581 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
OTOF-202ENST00000338581 FAM43AQ8N2R8 423 aa17.65■□□□□ 0.42
OTOF-202ENST00000338581 CEP89Q96ST8 783 aa17.64■□□□□ 0.41
OTOF-202ENST00000338581 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
OTOF-202ENST00000338581 BECN2A8MW95 431 aa17.64■□□□□ 0.41
OTOF-202ENST00000338581 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.41
OTOF-202ENST00000338581 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
OTOF-202ENST00000338581 SF3A1Q15459 793 aaKnown RBP17.63■□□□□ 0.41
OTOF-202ENST00000338581 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
OTOF-202ENST00000338581 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
OTOF-202ENST00000338581 CCAR2Q8N163 923 aaKnown RBP17.63■□□□□ 0.41
OTOF-202ENST00000338581 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
OTOF-202ENST00000338581 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
OTOF-202ENST00000338581 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
OTOF-202ENST00000338581 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
OTOF-202ENST00000338581 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
OTOF-202ENST00000338581 TSR1Q2NL82 804 aaKnown RBP17.62■□□□□ 0.41
OTOF-202ENST00000338581 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
OTOF-202ENST00000338581 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
OTOF-202ENST00000338581 TPM1P09493 284 aa17.6■□□□□ 0.41
OTOF-202ENST00000338581 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
OTOF-202ENST00000338581 RASSF8Q8NHQ8 419 aa17.6■□□□□ 0.41
OTOF-202ENST00000338581 NOL8Q76FK4 1167 aaKnown RBP17.6■□□□□ 0.41
OTOF-202ENST00000338581 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
OTOF-202ENST00000338581 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.41
OTOF-202ENST00000338581 CHMP5Q9NZZ3 219 aa17.58■□□□□ 0.4
OTOF-202ENST00000338581 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
OTOF-202ENST00000338581 CREBRFQ8IUR6 639 aa17.57■□□□□ 0.4
OTOF-202ENST00000338581 ZNF592Q92610 1267 aa17.57■□□□□ 0.4
OTOF-202ENST00000338581 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
OTOF-202ENST00000338581 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
OTOF-202ENST00000338581 KANK1Q14678 1352 aa17.56■□□□□ 0.4
OTOF-202ENST00000338581 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms