RNA–Protein interactions for RNA: ENST00000338074.6

EPB41L1-202, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L1, Length 6,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-202ENST00000338074 FOXD4L1Q9NU39 408 aa17.5■□□□□ 0.39
EPB41L1-202ENST00000338074 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
EPB41L1-202ENST00000338074 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
EPB41L1-202ENST00000338074 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
EPB41L1-202ENST00000338074 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
EPB41L1-202ENST00000338074 PDE4CQ08493 712 aa17.48■□□□□ 0.39
EPB41L1-202ENST00000338074 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
EPB41L1-202ENST00000338074 PKD2Q13563 968 aa17.47■□□□□ 0.39
EPB41L1-202ENST00000338074 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
EPB41L1-202ENST00000338074 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.38
EPB41L1-202ENST00000338074 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 SOGA1O94964 1423 aa17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 DEKP35659 375 aaKnown RBP17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
EPB41L1-202ENST00000338074 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
EPB41L1-202ENST00000338074 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
EPB41L1-202ENST00000338074 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
EPB41L1-202ENST00000338074 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
EPB41L1-202ENST00000338074 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
EPB41L1-202ENST00000338074 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
EPB41L1-202ENST00000338074 GOLGA6L6A8MZA4 724 aa17.42■□□□□ 0.38
EPB41L1-202ENST00000338074 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
EPB41L1-202ENST00000338074 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
EPB41L1-202ENST00000338074 KANK1Q14678 1352 aa17.41■□□□□ 0.38
EPB41L1-202ENST00000338074 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
EPB41L1-202ENST00000338074 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
EPB41L1-202ENST00000338074 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
EPB41L1-202ENST00000338074 EEA1Q15075 1411 aa17.4■□□□□ 0.38
EPB41L1-202ENST00000338074 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
EPB41L1-202ENST00000338074 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
EPB41L1-202ENST00000338074 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
EPB41L1-202ENST00000338074 CUX2O14529 1486 aa17.38■□□□□ 0.37
EPB41L1-202ENST00000338074 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
EPB41L1-202ENST00000338074 MCCP23508 829 aa17.37■□□□□ 0.37
EPB41L1-202ENST00000338074 MSNP26038 577 aaKnown RBP17.37■□□□□ 0.37
EPB41L1-202ENST00000338074 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
EPB41L1-202ENST00000338074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
EPB41L1-202ENST00000338074 MS4A1P11836 297 aa17.35■□□□□ 0.37
EPB41L1-202ENST00000338074 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
EPB41L1-202ENST00000338074 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
EPB41L1-202ENST00000338074 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
EPB41L1-202ENST00000338074 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
EPB41L1-202ENST00000338074 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
EPB41L1-202ENST00000338074 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
EPB41L1-202ENST00000338074 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.37
EPB41L1-202ENST00000338074 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
EPB41L1-202ENST00000338074 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.36
EPB41L1-202ENST00000338074 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
EPB41L1-202ENST00000338074 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
EPB41L1-202ENST00000338074 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
EPB41L1-202ENST00000338074 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
EPB41L1-202ENST00000338074 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
EPB41L1-202ENST00000338074 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
EPB41L1-202ENST00000338074 NUP155O75694 1391 aa17.27■□□□□ 0.35
EPB41L1-202ENST00000338074 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.35
EPB41L1-202ENST00000338074 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
EPB41L1-202ENST00000338074 NRDCO43847 1150 aa17.26■□□□□ 0.35
EPB41L1-202ENST00000338074 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
EPB41L1-202ENST00000338074 KIF3BO15066 747 aa17.25■□□□□ 0.35
EPB41L1-202ENST00000338074 PLIN1O60240 522 aa17.25■□□□□ 0.35
EPB41L1-202ENST00000338074 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
EPB41L1-202ENST00000338074 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
EPB41L1-202ENST00000338074 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
EPB41L1-202ENST00000338074 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
EPB41L1-202ENST00000338074 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
EPB41L1-202ENST00000338074 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
EPB41L1-202ENST00000338074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.22■□□□□ 0.35
EPB41L1-202ENST00000338074 TDRD9Q8NDG6 1382 aaKnown RBP17.21■□□□□ 0.35
EPB41L1-202ENST00000338074 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
EPB41L1-202ENST00000338074 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.35
EPB41L1-202ENST00000338074 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
EPB41L1-202ENST00000338074 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
EPB41L1-202ENST00000338074 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
EPB41L1-202ENST00000338074 PRM3Q9NNZ6 103 aa17.2■□□□□ 0.34
EPB41L1-202ENST00000338074 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
EPB41L1-202ENST00000338074 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
EPB41L1-202ENST00000338074 AMPHP49418 695 aa17.18■□□□□ 0.34
EPB41L1-202ENST00000338074 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
EPB41L1-202ENST00000338074 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
EPB41L1-202ENST00000338074 G3V3G9 751 aa17.17■□□□□ 0.34
EPB41L1-202ENST00000338074 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
EPB41L1-202ENST00000338074 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
EPB41L1-202ENST00000338074 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
EPB41L1-202ENST00000338074 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
EPB41L1-202ENST00000338074 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
EPB41L1-202ENST00000338074 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
EPB41L1-202ENST00000338074 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
EPB41L1-202ENST00000338074 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
EPB41L1-202ENST00000338074 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
EPB41L1-202ENST00000338074 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
EPB41L1-202ENST00000338074 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
EPB41L1-202ENST00000338074 RAD21O60216 631 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms