RNA–Protein interactions for RNA: ENST00000336695.4

ROMO1-201, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROMO1, Length 496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-201ENST00000336695 RIMS1Q86UR5 1692 aaKnown RBP27.98■■■□□ 2.07
ROMO1-201ENST00000336695 EFCAB2Q5VUJ9 269 aa27.98■■■□□ 2.07
ROMO1-201ENST00000336695 LMTK3Q96Q04 1460 aa27.97■■■□□ 2.07
ROMO1-201ENST00000336695 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
ROMO1-201ENST00000336695 CHIC1Q5VXU3 224 aa27.94■■■□□ 2.06
ROMO1-201ENST00000336695 MLECQ14165 292 aa27.91■■■□□ 2.06
ROMO1-201ENST00000336695 MYO5CQ9NQX4 1742 aa27.9■■■□□ 2.06
ROMO1-201ENST00000336695 TROQ12816 1431 aaPredicted RBP27.89■■■□□ 2.06
ROMO1-201ENST00000336695 ATP10AO60312 1499 aa27.89■■■□□ 2.05
ROMO1-201ENST00000336695 CLIP1P30622 1438 aa27.88■■■□□ 2.05
ROMO1-201ENST00000336695 PLPPR3Q6T4P5 718 aa27.88■■■□□ 2.05
ROMO1-201ENST00000336695 SIGLEC1Q9BZZ2 1709 aa27.87■■■□□ 2.05
ROMO1-201ENST00000336695 KIF14Q15058 1648 aa27.87■■■□□ 2.05
ROMO1-201ENST00000336695 C9orf84Q5VXU9 1444 aa27.85■■■□□ 2.05
ROMO1-201ENST00000336695 ZNF518AQ6AHZ1 1483 aa27.83■■■□□ 2.05
ROMO1-201ENST00000336695 HSPA2P54652 639 aa27.82■■■□□ 2.04
ROMO1-201ENST00000336695 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
ROMO1-201ENST00000336695 FER1L4A9Z1Z3 1794 aa27.81■■■□□ 2.04
ROMO1-201ENST00000336695 ARHGEF12Q9NZN5 1544 aa27.79■■■□□ 2.04
ROMO1-201ENST00000336695 AFAP1Q8N556 730 aa27.78■■■□□ 2.04
ROMO1-201ENST00000336695 MYT1LQ9UL68 1186 aa27.76■■■□□ 2.03
ROMO1-201ENST00000336695 KDM5CP41229 1560 aa27.75■■■□□ 2.03
ROMO1-201ENST00000336695 CCDC18Q5T9S5 1454 aa27.73■■■□□ 2.03
ROMO1-201ENST00000336695 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
ROMO1-201ENST00000336695 CASKIN1Q8WXD9 1431 aa27.72■■■□□ 2.03
ROMO1-201ENST00000336695 CDC42BPBQ9Y5S2 1711 aa27.68■■■□□ 2.02
ROMO1-201ENST00000336695 MLH3Q9UHC1 1453 aa27.68■■■□□ 2.02
ROMO1-201ENST00000336695 REREQ9P2R6 1566 aa27.66■■■□□ 2.02
ROMO1-201ENST00000336695 CEBPAP49715 358 aaPredicted RBP27.66■■■□□ 2.02
ROMO1-201ENST00000336695 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
ROMO1-201ENST00000336695 PREX2Q70Z35 1606 aa27.64■■■□□ 2.02
ROMO1-201ENST00000336695 PREX1Q8TCU6 1659 aa27.64■■■□□ 2.02
ROMO1-201ENST00000336695 ABCC1P33527 1531 aa27.62■■■□□ 2.01
ROMO1-201ENST00000336695 TRAPPC8Q9Y2L5 1435 aa27.61■■■□□ 2.01
ROMO1-201ENST00000336695 CERKQ8TCT0 537 aa27.6■■■□□ 2.01
ROMO1-201ENST00000336695 FYCO1Q9BQS8 1478 aa27.59■■■□□ 2.01
ROMO1-201ENST00000336695 ESF1Q9H501 851 aaKnown RBP27.59■■■□□ 2.01
ROMO1-201ENST00000336695 SETD1BQ9UPS6 1966 aaKnown RBP27.59■■■□□ 2.01
ROMO1-201ENST00000336695 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2.01
ROMO1-201ENST00000336695 AGLP35573 1532 aa27.58■■■□□ 2.01
ROMO1-201ENST00000336695 DMRT2Q9Y5R5 561 aa27.58■■■□□ 2.01
ROMO1-201ENST00000336695 ABCA6Q8N139 1617 aa27.58■■■□□ 2.01
ROMO1-201ENST00000336695 ITSN2Q9NZM3 1697 aa27.56■■■□□ 2
ROMO1-201ENST00000336695 CDC42BPAQ5VT25 1732 aa27.53■■■□□ 2
ROMO1-201ENST00000336695 ZNF777Q9ULD5 760 aaPredicted RBP27.5■■□□□ 1.99
ROMO1-201ENST00000336695 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
ROMO1-201ENST00000336695 CNTLNQ9NXG0 1405 aa27.49■■□□□ 1.99
ROMO1-201ENST00000336695 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
ROMO1-201ENST00000336695 C3P01024 1663 aa27.46■■□□□ 1.99
ROMO1-201ENST00000336695 SAMD9LQ8IVG5 1584 aa27.45■■□□□ 1.99
ROMO1-201ENST00000336695 SPAG9O60271 1321 aaKnown RBP27.44■■□□□ 1.98
ROMO1-201ENST00000336695 STRCQ7RTU9 1775 aa27.44■■□□□ 1.98
ROMO1-201ENST00000336695 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
ROMO1-201ENST00000336695 CFDP1Q9UEE9 299 aaPredicted RBP27.43■■□□□ 1.98
ROMO1-201ENST00000336695 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
ROMO1-201ENST00000336695 SYCP2Q9BX26 1530 aa27.41■■□□□ 1.98
ROMO1-201ENST00000336695 PLEKHH2Q8IVE3 1493 aa27.41■■□□□ 1.98
ROMO1-201ENST00000336695 PTPRTO14522 1441 aa27.4■■□□□ 1.98
ROMO1-201ENST00000336695 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
ROMO1-201ENST00000336695 MTUS2Q5JR59 1369 aa27.37■■□□□ 1.97
ROMO1-201ENST00000336695 NPATQ14207 1427 aa27.35■■□□□ 1.97
ROMO1-201ENST00000336695 ZMYM3Q14202 1370 aa27.35■■□□□ 1.97
ROMO1-201ENST00000336695 ATP7AQ04656 1500 aa27.33■■□□□ 1.97
ROMO1-201ENST00000336695 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
ROMO1-201ENST00000336695 A2MP01023 1474 aa27.31■■□□□ 1.96
ROMO1-201ENST00000336695 SUPT6HQ7KZ85 1726 aaKnown RBP27.3■■□□□ 1.96
ROMO1-201ENST00000336695 NCOA1Q15788 1441 aa27.29■■□□□ 1.96
ROMO1-201ENST00000336695 INO80Q9ULG1 1556 aaPredicted RBP27.28■■□□□ 1.96
ROMO1-201ENST00000336695 PLXNC1O60486 1568 aa27.27■■□□□ 1.96
ROMO1-201ENST00000336695 PPP6R1Q9UPN7 881 aa27.26■■□□□ 1.95
ROMO1-201ENST00000336695 GGT6Q6P531 493 aa27.25■■□□□ 1.95
ROMO1-201ENST00000336695 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
ROMO1-201ENST00000336695 ZNF644Q9H582 1327 aaPredicted RBP27.21■■□□□ 1.95
ROMO1-201ENST00000336695 CAMSAP1Q5T5Y3 1602 aa27.21■■□□□ 1.95
ROMO1-201ENST00000336695 TIAM1Q13009 1591 aa27.21■■□□□ 1.95
ROMO1-201ENST00000336695 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
ROMO1-201ENST00000336695 CLTCQ00610 1675 aaKnown RBP27.2■■□□□ 1.94
ROMO1-201ENST00000336695 RTEL1-TNFRSF6BF6WH68 1400 aa27.19■■□□□ 1.94
ROMO1-201ENST00000336695 MBD5Q9P267 1494 aa27.19■■□□□ 1.94
ROMO1-201ENST00000336695 ADGBQ8N7X0 1667 aa27.18■■□□□ 1.94
ROMO1-201ENST00000336695 LTBP4Q8N2S1 1624 aa27.18■■□□□ 1.94
ROMO1-201ENST00000336695 IQSEC2Q5JU85 1478 aa27.18■■□□□ 1.94
ROMO1-201ENST00000336695 PTPRKQ15262 1439 aa27.17■■□□□ 1.94
ROMO1-201ENST00000336695 PKD2Q13563 968 aa27.15■■□□□ 1.94
ROMO1-201ENST00000336695 NCKAP5LQ9HCH0 1330 aa27.15■■□□□ 1.94
ROMO1-201ENST00000336695 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
ROMO1-201ENST00000336695 DHX29Q7Z478 1369 aaKnown RBP27.13■■□□□ 1.93
ROMO1-201ENST00000336695 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
ROMO1-201ENST00000336695 ZNF142P52746 1687 aaPredicted RBP27.12■■□□□ 1.93
ROMO1-201ENST00000336695 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
ROMO1-201ENST00000336695 CEP170BQ9Y4F5 1589 aaPredicted RBP27.1■■□□□ 1.93
ROMO1-201ENST00000336695 DISP3Q9P2K9 1392 aa27.08■■□□□ 1.93
ROMO1-201ENST00000336695 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
ROMO1-201ENST00000336695 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
ROMO1-201ENST00000336695 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
ROMO1-201ENST00000336695 KIF3BO15066 747 aa27.05■■□□□ 1.92
ROMO1-201ENST00000336695 ZNF335Q9H4Z2 1342 aaPredicted RBP27.04■■□□□ 1.92
ROMO1-201ENST00000336695 A2ML1A8K2U0 1454 aa27.02■■□□□ 1.92
ROMO1-201ENST00000336695 CAMSAP2Q08AD1 1489 aa27.02■■□□□ 1.92
ROMO1-201ENST00000336695 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms