RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 CCER2I3L3R5 266 aa20.19■□□□□ 0.82
LIPA-202ENST00000336233 ADGBQ8N7X0 1667 aa20.19■□□□□ 0.82
LIPA-202ENST00000336233 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
LIPA-202ENST00000336233 CROCC2H7BZ55 1655 aa20.17■□□□□ 0.82
LIPA-202ENST00000336233 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
LIPA-202ENST00000336233 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
LIPA-202ENST00000336233 PLB1Q6P1J6 1458 aa20.16■□□□□ 0.82
LIPA-202ENST00000336233 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
LIPA-202ENST00000336233 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
LIPA-202ENST00000336233 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
LIPA-202ENST00000336233 ABCA8O94911 1581 aa20.14■□□□□ 0.82
LIPA-202ENST00000336233 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.82
LIPA-202ENST00000336233 ADGRL2O95490 1459 aa20.14■□□□□ 0.81
LIPA-202ENST00000336233 KIF14Q15058 1648 aa20.13■□□□□ 0.81
LIPA-202ENST00000336233 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
LIPA-202ENST00000336233 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
LIPA-202ENST00000336233 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
LIPA-202ENST00000336233 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
LIPA-202ENST00000336233 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
LIPA-202ENST00000336233 ANP32CO43423 234 aa20.11■□□□□ 0.81
LIPA-202ENST00000336233 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
LIPA-202ENST00000336233 TEX14Q8IWB6 1497 aa20.09■□□□□ 0.81
LIPA-202ENST00000336233 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
LIPA-202ENST00000336233 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
LIPA-202ENST00000336233 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
LIPA-202ENST00000336233 PZPP20742 1482 aa20.06■□□□□ 0.8
LIPA-202ENST00000336233 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
LIPA-202ENST00000336233 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
LIPA-202ENST00000336233 SHANK2Q9UPX8 1470 aa20.04■□□□□ 0.8
LIPA-202ENST00000336233 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
LIPA-202ENST00000336233 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
LIPA-202ENST00000336233 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
LIPA-202ENST00000336233 ATP10BO94823 1461 aa20■□□□□ 0.79
LIPA-202ENST00000336233 POLR1AO95602 1720 aaPredicted RBP20■□□□□ 0.79
LIPA-202ENST00000336233 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIPA-202ENST00000336233 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
LIPA-202ENST00000336233 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
LIPA-202ENST00000336233 MBD5Q9P267 1494 aa19.97■□□□□ 0.79
LIPA-202ENST00000336233 FBLN2P98095 1184 aa19.97■□□□□ 0.79
LIPA-202ENST00000336233 FOXD1Q16676 465 aa19.96■□□□□ 0.79
LIPA-202ENST00000336233 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
LIPA-202ENST00000336233 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
LIPA-202ENST00000336233 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.78
LIPA-202ENST00000336233 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
LIPA-202ENST00000336233 KDM5DQ9BY66 1539 aa19.95■□□□□ 0.78
LIPA-202ENST00000336233 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
LIPA-202ENST00000336233 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
LIPA-202ENST00000336233 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
LIPA-202ENST00000336233 CCDC7Q96M83 1385 aa19.9■□□□□ 0.78
LIPA-202ENST00000336233 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
LIPA-202ENST00000336233 C9orf84Q5VXU9 1444 aa19.9■□□□□ 0.78
LIPA-202ENST00000336233 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.78
LIPA-202ENST00000336233 PREX2Q70Z35 1606 aa19.89■□□□□ 0.77
LIPA-202ENST00000336233 CHD1O14646 1710 aa19.87■□□□□ 0.77
LIPA-202ENST00000336233 PTPRGP23470 1445 aa19.86■□□□□ 0.77
LIPA-202ENST00000336233 ZNF777Q9ULD5 760 aaPredicted RBP19.85■□□□□ 0.77
LIPA-202ENST00000336233 CDC42BPBQ9Y5S2 1711 aa19.84■□□□□ 0.77
LIPA-202ENST00000336233 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
LIPA-202ENST00000336233 SAMD9LQ8IVG5 1584 aa19.84■□□□□ 0.77
LIPA-202ENST00000336233 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.76
LIPA-202ENST00000336233 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
LIPA-202ENST00000336233 CCDC141Q6ZP82 1450 aa19.81■□□□□ 0.76
LIPA-202ENST00000336233 MAST1Q9Y2H9 1570 aa19.81■□□□□ 0.76
LIPA-202ENST00000336233 PKD2Q13563 968 aa19.79■□□□□ 0.76
LIPA-202ENST00000336233 KDM5CP41229 1560 aa19.79■□□□□ 0.76
LIPA-202ENST00000336233 RALGAPBQ86X10 1494 aa19.77■□□□□ 0.76
LIPA-202ENST00000336233 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
LIPA-202ENST00000336233 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
LIPA-202ENST00000336233 NUP155O75694 1391 aa19.76■□□□□ 0.75
LIPA-202ENST00000336233 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
LIPA-202ENST00000336233 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
LIPA-202ENST00000336233 FKBP8Q14318 412 aa19.75■□□□□ 0.75
LIPA-202ENST00000336233 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
LIPA-202ENST00000336233 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
LIPA-202ENST00000336233 ABCC2Q92887 1545 aa19.74■□□□□ 0.75
LIPA-202ENST00000336233 TTC37Q6PGP7 1564 aa19.74■□□□□ 0.75
LIPA-202ENST00000336233 NEFLP07196 543 aa19.74■□□□□ 0.75
LIPA-202ENST00000336233 BCORL1Q5H9F3 1711 aa19.74■□□□□ 0.75
LIPA-202ENST00000336233 UNC13BO14795 1591 aa19.73■□□□□ 0.75
LIPA-202ENST00000336233 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
LIPA-202ENST00000336233 USP47Q96K76 1375 aa19.72■□□□□ 0.75
LIPA-202ENST00000336233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.72■□□□□ 0.75
LIPA-202ENST00000336233 PLXNC1O60486 1568 aa19.72■□□□□ 0.75
LIPA-202ENST00000336233 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
LIPA-202ENST00000336233 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
LIPA-202ENST00000336233 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
LIPA-202ENST00000336233 SYCP2Q9BX26 1530 aa19.69■□□□□ 0.74
LIPA-202ENST00000336233 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
LIPA-202ENST00000336233 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.74
LIPA-202ENST00000336233 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
LIPA-202ENST00000336233 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
LIPA-202ENST00000336233 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
LIPA-202ENST00000336233 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
LIPA-202ENST00000336233 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
LIPA-202ENST00000336233 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.74
LIPA-202ENST00000336233 IQGAP3Q86VI3 1631 aa19.64■□□□□ 0.74
LIPA-202ENST00000336233 UHRF1BP1LA0JNW5 1464 aa19.64■□□□□ 0.73
LIPA-202ENST00000336233 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
LIPA-202ENST00000336233 ROCK2O75116 1388 aaKnown RBP19.63■□□□□ 0.73
LIPA-202ENST00000336233 MAGI2Q86UL8 1455 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms