RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 PTPRMP28827 1452 aa26.76■■□□□ 1.87
LINC00313-201ENST00000332440 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 MAGI2Q86UL8 1455 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 CDC42BPBQ9Y5S2 1711 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
LINC00313-201ENST00000332440 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
LINC00313-201ENST00000332440 PREX2Q70Z35 1606 aa26.72■■□□□ 1.87
LINC00313-201ENST00000332440 KDM5CP41229 1560 aa26.71■■□□□ 1.87
LINC00313-201ENST00000332440 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
LINC00313-201ENST00000332440 CLIP1P30622 1438 aa26.7■■□□□ 1.86
LINC00313-201ENST00000332440 CDK11AQ9UQ88 783 aaPredicted RBP26.69■■□□□ 1.86
LINC00313-201ENST00000332440 ARHGAP5Q13017 1502 aa26.66■■□□□ 1.86
LINC00313-201ENST00000332440 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
LINC00313-201ENST00000332440 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
LINC00313-201ENST00000332440 ABCC1P33527 1531 aa26.64■■□□□ 1.85
LINC00313-201ENST00000332440 EFCAB2Q5VUJ9 269 aa26.63■■□□□ 1.85
LINC00313-201ENST00000332440 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
LINC00313-201ENST00000332440 ARHGEF12Q9NZN5 1544 aa26.62■■□□□ 1.85
LINC00313-201ENST00000332440 ITSN2Q9NZM3 1697 aa26.6■■□□□ 1.85
LINC00313-201ENST00000332440 ATP10AO60312 1499 aa26.58■■□□□ 1.85
LINC00313-201ENST00000332440 DIP2CQ9Y2E4 1556 aa26.58■■□□□ 1.85
LINC00313-201ENST00000332440 C9orf84Q5VXU9 1444 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 REREQ9P2R6 1566 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 ABCA6Q8N139 1617 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
LINC00313-201ENST00000332440 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
LINC00313-201ENST00000332440 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
LINC00313-201ENST00000332440 MLH3Q9UHC1 1453 aa26.53■■□□□ 1.84
LINC00313-201ENST00000332440 SAMD9LQ8IVG5 1584 aa26.52■■□□□ 1.84
LINC00313-201ENST00000332440 TRAPPC8Q9Y2L5 1435 aa26.52■■□□□ 1.84
LINC00313-201ENST00000332440 AFAP1Q8N556 730 aa26.51■■□□□ 1.83
LINC00313-201ENST00000332440 GPATCH8Q9UKJ3 1502 aaKnown RBP26.5■■□□□ 1.83
LINC00313-201ENST00000332440 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
LINC00313-201ENST00000332440 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
LINC00313-201ENST00000332440 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
LINC00313-201ENST00000332440 AGLP35573 1532 aa26.42■■□□□ 1.82
LINC00313-201ENST00000332440 TIAM1Q13009 1591 aa26.4■■□□□ 1.82
LINC00313-201ENST00000332440 EHBP1L1Q8N3D4 1523 aa26.39■■□□□ 1.81
LINC00313-201ENST00000332440 INO80Q9ULG1 1556 aaPredicted RBP26.37■■□□□ 1.81
LINC00313-201ENST00000332440 MLECQ14165 292 aa26.36■■□□□ 1.81
LINC00313-201ENST00000332440 KIAA1107Q9UPP5 1409 aa26.35■■□□□ 1.81
LINC00313-201ENST00000332440 ILDR1Q86SU0 546 aaPredicted RBP26.33■■□□□ 1.81
LINC00313-201ENST00000332440 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
LINC00313-201ENST00000332440 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
LINC00313-201ENST00000332440 MTUS2Q5JR59 1369 aa26.31■■□□□ 1.8
LINC00313-201ENST00000332440 ATP7AQ04656 1500 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 C3P01024 1663 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 PLEKHH2Q8IVE3 1493 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 MBD5Q9P267 1494 aa26.27■■□□□ 1.8
LINC00313-201ENST00000332440 HNRNPMP52272 730 aaKnown RBP eCLIP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 HSPA2P54652 639 aa26.23■■□□□ 1.79
LINC00313-201ENST00000332440 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 ZNF777Q9ULD5 760 aaPredicted RBP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 CEBPAP49715 358 aaPredicted RBP26.22■■□□□ 1.79
LINC00313-201ENST00000332440 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
LINC00313-201ENST00000332440 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.79
LINC00313-201ENST00000332440 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.78
LINC00313-201ENST00000332440 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
LINC00313-201ENST00000332440 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
LINC00313-201ENST00000332440 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
LINC00313-201ENST00000332440 SPAG9O60271 1321 aaKnown RBP26.18■■□□□ 1.78
LINC00313-201ENST00000332440 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
LINC00313-201ENST00000332440 ADGBQ8N7X0 1667 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 MYT1LQ9UL68 1186 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 A2MP01023 1474 aa26.15■■□□□ 1.78
LINC00313-201ENST00000332440 SETD1BQ9UPS6 1966 aaKnown RBP26.15■■□□□ 1.78
LINC00313-201ENST00000332440 CNTLNQ9NXG0 1405 aa26.14■■□□□ 1.77
LINC00313-201ENST00000332440 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
LINC00313-201ENST00000332440 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
LINC00313-201ENST00000332440 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
LINC00313-201ENST00000332440 RTEL1-TNFRSF6BF6WH68 1400 aa26.1■■□□□ 1.77
LINC00313-201ENST00000332440 UHRF1BP1Q6BDS2 1440 aa26.09■■□□□ 1.77
LINC00313-201ENST00000332440 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
LINC00313-201ENST00000332440 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
LINC00313-201ENST00000332440 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
LINC00313-201ENST00000332440 NPATQ14207 1427 aa26.05■■□□□ 1.76
LINC00313-201ENST00000332440 ZMYM3Q14202 1370 aa26■■□□□ 1.75
LINC00313-201ENST00000332440 FBXO41Q8TF61 875 aa26■■□□□ 1.75
LINC00313-201ENST00000332440 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
LINC00313-201ENST00000332440 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
LINC00313-201ENST00000332440 DHX29Q7Z478 1369 aaKnown RBP25.98■■□□□ 1.75
LINC00313-201ENST00000332440 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
LINC00313-201ENST00000332440 PTPRKQ15262 1439 aa25.97■■□□□ 1.75
LINC00313-201ENST00000332440 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
LINC00313-201ENST00000332440 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
LINC00313-201ENST00000332440 FAM135AQ9P2D6 1515 aa25.93■■□□□ 1.74
LINC00313-201ENST00000332440 ESF1Q9H501 851 aaKnown RBP25.92■■□□□ 1.74
LINC00313-201ENST00000332440 MYOM3Q5VTT5 1437 aa25.91■■□□□ 1.74
LINC00313-201ENST00000332440 PTPRTO14522 1441 aa25.9■■□□□ 1.74
LINC00313-201ENST00000332440 MIA2Q96PC5 1412 aa25.9■■□□□ 1.74
LINC00313-201ENST00000332440 CEP170BQ9Y4F5 1589 aaPredicted RBP25.9■■□□□ 1.74
LINC00313-201ENST00000332440 CAMSAP1Q5T5Y3 1602 aa25.89■■□□□ 1.74
LINC00313-201ENST00000332440 PPP6R1Q9UPN7 881 aa25.89■■□□□ 1.74
LINC00313-201ENST00000332440 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
LINC00313-201ENST00000332440 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
LINC00313-201ENST00000332440 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
LINC00313-201ENST00000332440 GGT6Q6P531 493 aa25.87■■□□□ 1.73
LINC00313-201ENST00000332440 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms