RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
NSMCE3-201ENST00000332303 FMN1Q68DA7 1419 aa21.18■□□□□ 0.98
NSMCE3-201ENST00000332303 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
NSMCE3-201ENST00000332303 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
NSMCE3-201ENST00000332303 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
NSMCE3-201ENST00000332303 HSCBQ8IWL3 235 aa21.17■□□□□ 0.98
NSMCE3-201ENST00000332303 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
NSMCE3-201ENST00000332303 PLCB2Q00722 1185 aa21.16■□□□□ 0.98
NSMCE3-201ENST00000332303 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
NSMCE3-201ENST00000332303 NUP155O75694 1391 aa21.16■□□□□ 0.98
NSMCE3-201ENST00000332303 FOXD1Q16676 465 aa21.16■□□□□ 0.98
NSMCE3-201ENST00000332303 STK26Q9P289 416 aa21.14■□□□□ 0.98
NSMCE3-201ENST00000332303 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.97
NSMCE3-201ENST00000332303 RALBP1Q15311 655 aa21.14■□□□□ 0.97
NSMCE3-201ENST00000332303 RAB3GAP2Q9H2M9 1393 aa21.13■□□□□ 0.97
NSMCE3-201ENST00000332303 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
NSMCE3-201ENST00000332303 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
NSMCE3-201ENST00000332303 ANKRD30AQ9BXX3 1397 aa21.13■□□□□ 0.97
NSMCE3-201ENST00000332303 MCCP23508 829 aa21.12■□□□□ 0.97
NSMCE3-201ENST00000332303 GOLGA6L4A6NEF3 574 aa21.12■□□□□ 0.97
NSMCE3-201ENST00000332303 NRDCO43847 1150 aa21.12■□□□□ 0.97
NSMCE3-201ENST00000332303 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
NSMCE3-201ENST00000332303 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
NSMCE3-201ENST00000332303 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
NSMCE3-201ENST00000332303 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
NSMCE3-201ENST00000332303 NAP1L2Q9ULW6 460 aaPredicted RBP21.11■□□□□ 0.97
NSMCE3-201ENST00000332303 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
NSMCE3-201ENST00000332303 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
NSMCE3-201ENST00000332303 GOLGA6L6A8MZA4 724 aa21.08■□□□□ 0.97
NSMCE3-201ENST00000332303 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
NSMCE3-201ENST00000332303 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.97
NSMCE3-201ENST00000332303 TAOK2Q9UL54 1235 aa21.08■□□□□ 0.96
NSMCE3-201ENST00000332303 CHMP4AQ9BY43 222 aa21.04■□□□□ 0.96
NSMCE3-201ENST00000332303 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
NSMCE3-201ENST00000332303 RSPH4AQ5TD94 716 aa21.04■□□□□ 0.96
NSMCE3-201ENST00000332303 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
NSMCE3-201ENST00000332303 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
NSMCE3-201ENST00000332303 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
NSMCE3-201ENST00000332303 KIF3BO15066 747 aa21.01■□□□□ 0.95
NSMCE3-201ENST00000332303 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
NSMCE3-201ENST00000332303 RBM19Q9Y4C8 960 aaKnown RBP21■□□□□ 0.95
NSMCE3-201ENST00000332303 TULP1O00294 542 aaPredicted RBP21■□□□□ 0.95
NSMCE3-201ENST00000332303 EIF3AQ14152 1382 aaKnown RBP20.99■□□□□ 0.95
NSMCE3-201ENST00000332303 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
NSMCE3-201ENST00000332303 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
NSMCE3-201ENST00000332303 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
NSMCE3-201ENST00000332303 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
NSMCE3-201ENST00000332303 TERF2IPQ9NYB0 399 aa20.97■□□□□ 0.95
NSMCE3-201ENST00000332303 APBB1O00213 710 aa20.97■□□□□ 0.95
NSMCE3-201ENST00000332303 PAK3O75914 559 aaPredicted RBP20.96■□□□□ 0.95
NSMCE3-201ENST00000332303 ITPRIPQ8IWB1 547 aa20.95■□□□□ 0.95
NSMCE3-201ENST00000332303 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
NSMCE3-201ENST00000332303 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
NSMCE3-201ENST00000332303 RTN4Q9NQC3 1192 aaKnown RBP20.93■□□□□ 0.94
NSMCE3-201ENST00000332303 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
NSMCE3-201ENST00000332303 PDE3BQ13370 1112 aa20.93■□□□□ 0.94
NSMCE3-201ENST00000332303 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
NSMCE3-201ENST00000332303 CSB-PGBD3P0DP91 1061 aa20.91■□□□□ 0.94
NSMCE3-201ENST00000332303 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
NSMCE3-201ENST00000332303 HDAC5Q9UQL6 1122 aa20.91■□□□□ 0.94
NSMCE3-201ENST00000332303 CHAF1AQ13111 956 aaPredicted RBP20.91■□□□□ 0.94
NSMCE3-201ENST00000332303 RAPGEF2Q9Y4G8 1499 aa20.9■□□□□ 0.94
NSMCE3-201ENST00000332303 GBP4Q96PP9 640 aa20.9■□□□□ 0.94
NSMCE3-201ENST00000332303 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.94
NSMCE3-201ENST00000332303 SMC4Q9NTJ3 1288 aa20.89■□□□□ 0.93
NSMCE3-201ENST00000332303 MSNP26038 577 aaKnown RBP20.88■□□□□ 0.93
NSMCE3-201ENST00000332303 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
NSMCE3-201ENST00000332303 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
NSMCE3-201ENST00000332303 WASHC2CQ9Y4E1 1318 aa20.87■□□□□ 0.93
NSMCE3-201ENST00000332303 HMMRO75330 724 aa20.87■□□□□ 0.93
NSMCE3-201ENST00000332303 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
NSMCE3-201ENST00000332303 PTMSP20962 102 aa20.86■□□□□ 0.93
NSMCE3-201ENST00000332303 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
NSMCE3-201ENST00000332303 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
NSMCE3-201ENST00000332303 EID1Q9Y6B2 187 aa20.84■□□□□ 0.93
NSMCE3-201ENST00000332303 PHLDB1Q86UU1 1377 aa20.84■□□□□ 0.93
NSMCE3-201ENST00000332303 DEKP35659 375 aaKnown RBP20.83■□□□□ 0.92
NSMCE3-201ENST00000332303 ZNF330Q9Y3S2 320 aaPredicted RBP20.83■□□□□ 0.92
NSMCE3-201ENST00000332303 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
NSMCE3-201ENST00000332303 CENPJQ9HC77 1338 aaPredicted RBP20.82■□□□□ 0.92
NSMCE3-201ENST00000332303 DRC7Q8IY82 874 aa20.82■□□□□ 0.92
NSMCE3-201ENST00000332303 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
NSMCE3-201ENST00000332303 CLUAP1Q96AJ1 413 aa20.81■□□□□ 0.92
NSMCE3-201ENST00000332303 HTATSF1O43719 755 aaKnown RBP20.81■□□□□ 0.92
NSMCE3-201ENST00000332303 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
NSMCE3-201ENST00000332303 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
NSMCE3-201ENST00000332303 ST20-MTHFSA0A0A6YYL1 179 aa20.78■□□□□ 0.92
NSMCE3-201ENST00000332303 CCDC146Q8IYE0 955 aa20.78■□□□□ 0.92
NSMCE3-201ENST00000332303 GORABQ5T7V8 394 aa20.78■□□□□ 0.92
NSMCE3-201ENST00000332303 GPATCH3Q96I76 525 aa20.77■□□□□ 0.92
NSMCE3-201ENST00000332303 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.92
NSMCE3-201ENST00000332303 AMPHP49418 695 aa20.76■□□□□ 0.91
NSMCE3-201ENST00000332303 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
NSMCE3-201ENST00000332303 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
NSMCE3-201ENST00000332303 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
NSMCE3-201ENST00000332303 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
NSMCE3-201ENST00000332303 SLC4A10Q6U841 1118 aa20.74■□□□□ 0.91
NSMCE3-201ENST00000332303 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
NSMCE3-201ENST00000332303 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
NSMCE3-201ENST00000332303 TRIM6-TRIM34B2RNG4 842 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms