RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA6L1Q8N7Z2 621 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 MAP7D2Q96T17 732 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 ISY1Q9ULR0 285 aaKnown RBP6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 SOX12O15370 315 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA2Q08379 1002 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 ZNF771Q7L3S4 317 aaPredicted RBP6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 TPRNQ4KMQ1 711 aa6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 CALRP27797 417 aaKnown RBP6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 PHF14O94880 888 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 SPRYD3Q8NCJ5 442 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 CLSTN1O94985 981 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 TNIKQ9UKE5 1360 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 TPM2P07951 284 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 CCDC9Q9Y3X0 531 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 BAZ1BQ9UIG0 1483 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 CFAP53Q96M91 514 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 MCCP23508 829 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 RRP9O43818 475 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 FAM43AQ8N2R8 423 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 APPP05067 770 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 CEP164Q9UPV0 1460 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 CFDP1Q9UEE9 299 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 NAP1L2Q9ULW6 460 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 PAK3O75914 559 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 RCAN3Q9UKA8 241 aa6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 FRAT1Q92837 279 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 NOM1Q5C9Z4 860 aaKnown RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 GON4LQ3T8J9 2241 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 TEX35Q5T0J7 233 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 SAFB2Q14151 953 aaKnown RBP eCLIP6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 BICRAQ9NZM4 1560 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 CCDC66A2RUB6 948 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 NUDCQ9Y266 331 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 KANK1Q14678 1352 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 HTATSF1O43719 755 aaKnown RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 CALD1Q05682 793 aaKnown RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 TAF3Q5VWG9 929 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 ZNF330Q9Y3S2 320 aaPredicted RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 UNC13AQ9UPW8 1703 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 FGD1P98174 961 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 PDE4AP27815 886 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 KRI1Q8N9T8 703 aaKnown RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 KTN1Q86UP2 1357 aaKnown RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 GPS2Q13227 327 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 RWDD1Q9H446 243 aaPredicted RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 PRM3Q9NNZ6 103 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 STK26Q9P289 416 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 NEUROD2Q15784 382 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 FAM161AQ3B820 660 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 KIF16BQ96L93 1317 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 MAPK8IP3Q9UPT6 1336 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 TMX4Q9H1E5 349 aaPredicted RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CFAP65Q6ZU64 1925 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 NOC3LQ8WTT2 800 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CECR2Q9BXF3 1484 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CWC15Q9P013 229 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 KCNJ4P48050 445 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 TPM4P67936 248 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 ZBED9Q6R2W3 1325 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 SRPK2P78362 688 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 SETD5Q9C0A6 1442 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MEX3CQ5U5Q3 659 aaKnown RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PRDM2Q13029 1718 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PHF23Q9BUL5 403 aaPredicted RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MFAP1P55081 439 aaKnown RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PDE3BQ13370 1112 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MROH2BQ7Z745 1585 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 MRE11P49959 708 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 GGT6Q6P531 493 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 SMARCA4P51532 1647 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 CENPQQ7L2Z9 268 aaPredicted RBP6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 RALBP1Q15311 655 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 SIN3AQ96ST3 1273 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 CCDC39Q9UFE4 941 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 VPS8Q8N3P4 1428 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 PEG3Q9GZU2 1588 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 KIF27Q86VH2 1401 aa6.65□□□□□ -1.35
SDR42E1-201ENST00000328945 DDX49Q9Y6V7 483 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms