RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 ASXL2Q76L83 1435 aa18.76■□□□□ 0.59
PTPN6-201ENST00000318974 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
PTPN6-201ENST00000318974 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
PTPN6-201ENST00000318974 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
PTPN6-201ENST00000318974 DAPK1P53355 1430 aa18.72■□□□□ 0.59
PTPN6-201ENST00000318974 RAB3GAP2Q9H2M9 1393 aa18.71■□□□□ 0.59
PTPN6-201ENST00000318974 ABCC5O15440 1437 aa18.71■□□□□ 0.59
PTPN6-201ENST00000318974 DNMT1P26358 1616 aaKnown RBP18.71■□□□□ 0.59
PTPN6-201ENST00000318974 PLCH2O75038 1416 aa18.7■□□□□ 0.58
PTPN6-201ENST00000318974 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
PTPN6-201ENST00000318974 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
PTPN6-201ENST00000318974 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
PTPN6-201ENST00000318974 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
PTPN6-201ENST00000318974 MYO5CQ9NQX4 1742 aa18.68■□□□□ 0.58
PTPN6-201ENST00000318974 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
PTPN6-201ENST00000318974 SAMD9LQ8IVG5 1584 aa18.66■□□□□ 0.58
PTPN6-201ENST00000318974 NAIPQ13075 1403 aa18.65■□□□□ 0.58
PTPN6-201ENST00000318974 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
PTPN6-201ENST00000318974 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
PTPN6-201ENST00000318974 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
PTPN6-201ENST00000318974 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
PTPN6-201ENST00000318974 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
PTPN6-201ENST00000318974 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.57
PTPN6-201ENST00000318974 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
PTPN6-201ENST00000318974 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
PTPN6-201ENST00000318974 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PTPN6-201ENST00000318974 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
PTPN6-201ENST00000318974 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
PTPN6-201ENST00000318974 ARHGEF5Q12774 1597 aa18.62■□□□□ 0.57
PTPN6-201ENST00000318974 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
PTPN6-201ENST00000318974 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
PTPN6-201ENST00000318974 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
PTPN6-201ENST00000318974 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
PTPN6-201ENST00000318974 CROCC2H7BZ55 1655 aa18.59■□□□□ 0.57
PTPN6-201ENST00000318974 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
PTPN6-201ENST00000318974 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
PTPN6-201ENST00000318974 SYCP2Q9BX26 1530 aa18.58■□□□□ 0.56
PTPN6-201ENST00000318974 GCC2Q8IWJ2 1684 aa18.57■□□□□ 0.56
PTPN6-201ENST00000318974 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
PTPN6-201ENST00000318974 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
PTPN6-201ENST00000318974 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
PTPN6-201ENST00000318974 FANCAO15360 1455 aa18.56■□□□□ 0.56
PTPN6-201ENST00000318974 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
PTPN6-201ENST00000318974 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
PTPN6-201ENST00000318974 ABCC1P33527 1531 aa18.55■□□□□ 0.56
PTPN6-201ENST00000318974 CD109Q6YHK3 1445 aa18.54■□□□□ 0.56
PTPN6-201ENST00000318974 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
PTPN6-201ENST00000318974 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
PTPN6-201ENST00000318974 MAST1Q9Y2H9 1570 aa18.5■□□□□ 0.55
PTPN6-201ENST00000318974 GLI2P10070 1586 aa18.49■□□□□ 0.55
PTPN6-201ENST00000318974 KDM6BO15054 1643 aa18.48■□□□□ 0.55
PTPN6-201ENST00000318974 TRAPPC8Q9Y2L5 1435 aa18.48■□□□□ 0.55
PTPN6-201ENST00000318974 DIEXFQ68CQ4 756 aaKnown RBP18.48■□□□□ 0.55
PTPN6-201ENST00000318974 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
PTPN6-201ENST00000318974 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
PTPN6-201ENST00000318974 KIF15Q9NS87 1388 aa18.46■□□□□ 0.55
PTPN6-201ENST00000318974 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
PTPN6-201ENST00000318974 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
PTPN6-201ENST00000318974 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
PTPN6-201ENST00000318974 ANKRD50Q9ULJ7 1429 aa18.45■□□□□ 0.54
PTPN6-201ENST00000318974 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
PTPN6-201ENST00000318974 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
PTPN6-201ENST00000318974 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
PTPN6-201ENST00000318974 AFAP1Q8N556 730 aa18.43■□□□□ 0.54
PTPN6-201ENST00000318974 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
PTPN6-201ENST00000318974 NEO1Q92859 1461 aa18.42■□□□□ 0.54
PTPN6-201ENST00000318974 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
PTPN6-201ENST00000318974 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
PTPN6-201ENST00000318974 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
PTPN6-201ENST00000318974 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
PTPN6-201ENST00000318974 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
PTPN6-201ENST00000318974 DUOX2Q9NRD8 1548 aa18.36■□□□□ 0.53
PTPN6-201ENST00000318974 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
PTPN6-201ENST00000318974 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
PTPN6-201ENST00000318974 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PTPN6-201ENST00000318974 MYT1LQ9UL68 1186 aa18.33■□□□□ 0.53
PTPN6-201ENST00000318974 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
PTPN6-201ENST00000318974 ERBINQ96RT1 1412 aa18.32■□□□□ 0.52
PTPN6-201ENST00000318974 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
PTPN6-201ENST00000318974 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
PTPN6-201ENST00000318974 PZPP20742 1482 aa18.31■□□□□ 0.52
PTPN6-201ENST00000318974 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
PTPN6-201ENST00000318974 NUP155O75694 1391 aa18.31■□□□□ 0.52
PTPN6-201ENST00000318974 KDM5CP41229 1560 aa18.3■□□□□ 0.52
PTPN6-201ENST00000318974 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
PTPN6-201ENST00000318974 KDM5DQ9BY66 1539 aa18.29■□□□□ 0.52
PTPN6-201ENST00000318974 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
PTPN6-201ENST00000318974 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
PTPN6-201ENST00000318974 RAPGEF3O95398 923 aa18.27■□□□□ 0.52
PTPN6-201ENST00000318974 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
PTPN6-201ENST00000318974 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
PTPN6-201ENST00000318974 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
PTPN6-201ENST00000318974 KIDINS220Q9ULH0 1771 aa18.26■□□□□ 0.51
PTPN6-201ENST00000318974 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
PTPN6-201ENST00000318974 UNC13BO14795 1591 aa18.25■□□□□ 0.51
PTPN6-201ENST00000318974 HECW2Q9P2P5 1572 aa18.25■□□□□ 0.51
PTPN6-201ENST00000318974 FOXD1Q16676 465 aa18.24■□□□□ 0.51
PTPN6-201ENST00000318974 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
PTPN6-201ENST00000318974 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
PTPN6-201ENST00000318974 PKD2Q13563 968 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms