RNA–Protein interactions for RNA: ENST00000317296.9

STAG3-201, Transcript of stromal antigen 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STAG3, Length 4,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-201ENST00000317296 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
STAG3-201ENST00000317296 FOXD1Q16676 465 aa13.55□□□□□ -0.24
STAG3-201ENST00000317296 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
STAG3-201ENST00000317296 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
STAG3-201ENST00000317296 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
STAG3-201ENST00000317296 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
STAG3-201ENST00000317296 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
STAG3-201ENST00000317296 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 ARXQ96QS3 562 aa13.52□□□□□ -0.24
STAG3-201ENST00000317296 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
STAG3-201ENST00000317296 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
STAG3-201ENST00000317296 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
STAG3-201ENST00000317296 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
STAG3-201ENST00000317296 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
STAG3-201ENST00000317296 CUX1P39880 1505 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
STAG3-201ENST00000317296 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
STAG3-201ENST00000317296 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
STAG3-201ENST00000317296 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.26
STAG3-201ENST00000317296 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
STAG3-201ENST00000317296 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
STAG3-201ENST00000317296 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
STAG3-201ENST00000317296 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
STAG3-201ENST00000317296 CCDC9Q9Y3X0 531 aaKnown RBP13.44□□□□□ -0.26
STAG3-201ENST00000317296 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
STAG3-201ENST00000317296 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
STAG3-201ENST00000317296 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
STAG3-201ENST00000317296 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
STAG3-201ENST00000317296 TMF1P82094 1093 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
STAG3-201ENST00000317296 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
STAG3-201ENST00000317296 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
STAG3-201ENST00000317296 FANCIQ9NVI1 1328 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 GLIPR1L2Q4G1C9 344 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
STAG3-201ENST00000317296 NPHP1O15259 732 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
STAG3-201ENST00000317296 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
STAG3-201ENST00000317296 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
STAG3-201ENST00000317296 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
STAG3-201ENST00000317296 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.27
STAG3-201ENST00000317296 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
STAG3-201ENST00000317296 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
STAG3-201ENST00000317296 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
STAG3-201ENST00000317296 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
STAG3-201ENST00000317296 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
STAG3-201ENST00000317296 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
STAG3-201ENST00000317296 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
STAG3-201ENST00000317296 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
STAG3-201ENST00000317296 MSH5O43196 834 aa13.29□□□□□ -0.28
STAG3-201ENST00000317296 PRDM2Q13029 1718 aa13.29□□□□□ -0.28
STAG3-201ENST00000317296 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
STAG3-201ENST00000317296 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
STAG3-201ENST00000317296 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
STAG3-201ENST00000317296 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
STAG3-201ENST00000317296 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
STAG3-201ENST00000317296 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
STAG3-201ENST00000317296 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 ATF3P18847 181 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
STAG3-201ENST00000317296 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
STAG3-201ENST00000317296 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
STAG3-201ENST00000317296 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
STAG3-201ENST00000317296 THEMISQ8N1K5 641 aaPredicted RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
STAG3-201ENST00000317296 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
STAG3-201ENST00000317296 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
STAG3-201ENST00000317296 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 AMPHP49418 695 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
STAG3-201ENST00000317296 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
STAG3-201ENST00000317296 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms