RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 NUP160Q12769 1436 aa29.16■■■□□ 2.26
RAB1B-201ENST00000311481 MPHOSPH9Q99550 1183 aa29.16■■■□□ 2.26
RAB1B-201ENST00000311481 CCER2I3L3R5 266 aa29.16■■■□□ 2.26
RAB1B-201ENST00000311481 ADCY10Q96PN6 1610 aa29.15■■■□□ 2.26
RAB1B-201ENST00000311481 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
RAB1B-201ENST00000311481 CARMIL2Q6F5E8 1435 aa29.1■■■□□ 2.25
RAB1B-201ENST00000311481 PRG4Q92954 1404 aaPredicted RBP29.1■■■□□ 2.25
RAB1B-201ENST00000311481 PLB1Q6P1J6 1458 aa29.09■■■□□ 2.25
RAB1B-201ENST00000311481 ANP32CO43423 234 aa29.08■■■□□ 2.25
RAB1B-201ENST00000311481 ZNF644Q9H582 1327 aaPredicted RBP29.07■■■□□ 2.24
RAB1B-201ENST00000311481 SUPT16HQ9Y5B9 1047 aaKnown RBP29.06■■■□□ 2.24
RAB1B-201ENST00000311481 CAMSAP2Q08AD1 1489 aa29.05■■■□□ 2.24
RAB1B-201ENST00000311481 ADGBQ8N7X0 1667 aa29.04■■■□□ 2.24
RAB1B-201ENST00000311481 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
RAB1B-201ENST00000311481 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
RAB1B-201ENST00000311481 JPH4Q96JJ6 628 aa29.03■■■□□ 2.24
RAB1B-201ENST00000311481 CHD1O14646 1710 aa29.03■■■□□ 2.24
RAB1B-201ENST00000311481 KIF14Q15058 1648 aa29.02■■■□□ 2.24
RAB1B-201ENST00000311481 RPRD2Q5VT52 1461 aaKnown RBP29■■■□□ 2.23
RAB1B-201ENST00000311481 ABCA8O94911 1581 aa29■■■□□ 2.23
RAB1B-201ENST00000311481 CROCC2H7BZ55 1655 aa29■■■□□ 2.23
RAB1B-201ENST00000311481 ADGRL2O95490 1459 aa28.98■■■□□ 2.23
RAB1B-201ENST00000311481 CFDP1Q9UEE9 299 aaPredicted RBP28.97■■■□□ 2.23
RAB1B-201ENST00000311481 L3MBTL2Q969R5 705 aa28.96■■■□□ 2.23
RAB1B-201ENST00000311481 HSPA5P11021 654 aaKnown RBP28.95■■■□□ 2.23
RAB1B-201ENST00000311481 NCOA1Q15788 1441 aa28.95■■■□□ 2.22
RAB1B-201ENST00000311481 TEX14Q8IWB6 1497 aa28.93■■■□□ 2.22
RAB1B-201ENST00000311481 FOXD1Q16676 465 aa28.93■■■□□ 2.22
RAB1B-201ENST00000311481 PZPP20742 1482 aa28.92■■■□□ 2.22
RAB1B-201ENST00000311481 EIF4G2P78344 907 aaKnown RBP eCLIP28.91■■■□□ 2.22
RAB1B-201ENST00000311481 CDC42BPAQ5VT25 1732 aa28.89■■■□□ 2.22
RAB1B-201ENST00000311481 WASHC2AQ641Q2 1341 aa28.88■■■□□ 2.21
RAB1B-201ENST00000311481 SLC4A1APQ9BWU0 796 aaKnown RBP28.88■■■□□ 2.21
RAB1B-201ENST00000311481 ABCC10Q5T3U5 1492 aa28.88■■■□□ 2.21
RAB1B-201ENST00000311481 ATP10BO94823 1461 aa28.87■■■□□ 2.21
RAB1B-201ENST00000311481 ANKRD30AQ9BXX3 1397 aa28.83■■■□□ 2.21
RAB1B-201ENST00000311481 PLEKHD1A6NEE1 506 aa28.82■■■□□ 2.2
RAB1B-201ENST00000311481 SHANK2Q9UPX8 1470 aa28.82■■■□□ 2.2
RAB1B-201ENST00000311481 NBPF8Q3BBV2 869 aa28.79■■■□□ 2.2
RAB1B-201ENST00000311481 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
RAB1B-201ENST00000311481 KIAA1107Q9UPP5 1409 aa28.78■■■□□ 2.2
RAB1B-201ENST00000311481 CNTLNQ9NXG0 1405 aa28.77■■■□□ 2.2
RAB1B-201ENST00000311481 OSCARQ8IYS5 282 aa28.77■■■□□ 2.2
RAB1B-201ENST00000311481 POLR1AO95602 1720 aaPredicted RBP28.76■■■□□ 2.19
RAB1B-201ENST00000311481 SPATA31E1Q6ZUB1 1445 aa28.74■■■□□ 2.19
RAB1B-201ENST00000311481 CCDC7Q96M83 1385 aa28.74■■■□□ 2.19
RAB1B-201ENST00000311481 MBD5Q9P267 1494 aa28.73■■■□□ 2.19
RAB1B-201ENST00000311481 ANKRD50Q9ULJ7 1429 aa28.73■■■□□ 2.19
RAB1B-201ENST00000311481 C9orf84Q5VXU9 1444 aa28.7■■■□□ 2.19
RAB1B-201ENST00000311481 ARHGEF5Q12774 1597 aa28.7■■■□□ 2.19
RAB1B-201ENST00000311481 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
RAB1B-201ENST00000311481 PTPRGP23470 1445 aa28.69■■■□□ 2.18
RAB1B-201ENST00000311481 C11orf95C9JLR9 678 aaPredicted RBP28.68■■■□□ 2.18
RAB1B-201ENST00000311481 KDM5DQ9BY66 1539 aa28.68■■■□□ 2.18
RAB1B-201ENST00000311481 PKD2Q13563 968 aa28.64■■■□□ 2.17
RAB1B-201ENST00000311481 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
RAB1B-201ENST00000311481 PREX2Q70Z35 1606 aa28.61■■■□□ 2.17
RAB1B-201ENST00000311481 FKBP8Q14318 412 aa28.6■■■□□ 2.17
RAB1B-201ENST00000311481 CDC42BPBQ9Y5S2 1711 aa28.6■■■□□ 2.17
RAB1B-201ENST00000311481 TSPY4P0CV99 314 aa28.59■■■□□ 2.17
RAB1B-201ENST00000311481 TSPY10P0CW01 314 aa28.59■■■□□ 2.17
RAB1B-201ENST00000311481 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
RAB1B-201ENST00000311481 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
RAB1B-201ENST00000311481 KIF7Q2M1P5 1343 aa28.57■■■□□ 2.16
RAB1B-201ENST00000311481 NUP155O75694 1391 aa28.56■■■□□ 2.16
RAB1B-201ENST00000311481 UHRF1BP1Q6BDS2 1440 aa28.56■■■□□ 2.16
RAB1B-201ENST00000311481 NEFLP07196 543 aa28.55■■■□□ 2.16
RAB1B-201ENST00000311481 PRKRIP1Q9H875 184 aaPredicted RBP28.54■■■□□ 2.16
RAB1B-201ENST00000311481 KIF15Q9NS87 1388 aa28.54■■■□□ 2.16
RAB1B-201ENST00000311481 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
RAB1B-201ENST00000311481 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
RAB1B-201ENST00000311481 HNRNPMP52272 730 aaKnown RBP eCLIP28.51■■■□□ 2.151e-6■■■■□ 22.6
RAB1B-201ENST00000311481 RSPH4AQ5TD94 716 aa28.51■■■□□ 2.15
RAB1B-201ENST00000311481 HNRNPUQ00839 825 aaKnown RBP eCLIP28.5■■■□□ 2.15
RAB1B-201ENST00000311481 KDM5CP41229 1560 aa28.5■■■□□ 2.15
RAB1B-201ENST00000311481 MAST1Q9Y2H9 1570 aa28.48■■■□□ 2.15
RAB1B-201ENST00000311481 RALGAPBQ86X10 1494 aa28.48■■■□□ 2.15
RAB1B-201ENST00000311481 BCORL1Q5H9F3 1711 aa28.47■■■□□ 2.15
RAB1B-201ENST00000311481 USP47Q96K76 1375 aa28.47■■■□□ 2.15
RAB1B-201ENST00000311481 TSHZ2Q9NRE2 1034 aa28.47■■■□□ 2.15
RAB1B-201ENST00000311481 CCDC184Q52MB2 194 aa28.44■■■□□ 2.14
RAB1B-201ENST00000311481 BCANQ96GW7 911 aa28.44■■■□□ 2.14
RAB1B-201ENST00000311481 ARID4BQ4LE39 1312 aaPredicted RBP28.44■■■□□ 2.14
RAB1B-201ENST00000311481 TTC37Q6PGP7 1564 aa28.43■■■□□ 2.14
RAB1B-201ENST00000311481 ABCC2Q92887 1545 aa28.42■■■□□ 2.14
RAB1B-201ENST00000311481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.145e-6■□□□□ 9.5
RAB1B-201ENST00000311481 FAM135AQ9P2D6 1515 aa28.39■■■□□ 2.14
RAB1B-201ENST00000311481 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
RAB1B-201ENST00000311481 MYO5CQ9NQX4 1742 aa28.38■■■□□ 2.13
RAB1B-201ENST00000311481 UNC13BO14795 1591 aa28.38■■■□□ 2.13
RAB1B-201ENST00000311481 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
RAB1B-201ENST00000311481 ARHGAP5Q13017 1502 aa28.37■■■□□ 2.13
RAB1B-201ENST00000311481 ZNF326Q5BKZ1 582 aaKnown RBP28.36■■■□□ 2.13
RAB1B-201ENST00000311481 PLEKHH2Q8IVE3 1493 aa28.36■■■□□ 2.13
RAB1B-201ENST00000311481 MRS2Q9HD23 443 aa28.35■■■□□ 2.13
RAB1B-201ENST00000311481 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
RAB1B-201ENST00000311481 ROCK2O75116 1388 aaKnown RBP28.3■■■□□ 2.12
RAB1B-201ENST00000311481 CARD11Q9BXL7 1154 aa28.27■■■□□ 2.12
RAB1B-201ENST00000311481 ZBED9Q6R2W3 1325 aa28.27■■■□□ 2.12
RAB1B-201ENST00000311481 FAM9BQ8IZU0 186 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms