RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
PRDM2-202ENST00000311066 ANP32AP39687 249 aaKnown RBP8.66□□□□□ -1.02
PRDM2-202ENST00000311066 NBR1Q14596 966 aa8.66□□□□□ -1.02
PRDM2-202ENST00000311066 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
PRDM2-202ENST00000311066 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
PRDM2-202ENST00000311066 CCDC136Q96JN2 1154 aa8.66□□□□□ -1.02
PRDM2-202ENST00000311066 CC2D1BQ5T0F9 858 aaKnown RBP8.65□□□□□ -1.02
PRDM2-202ENST00000311066 GRIN2BQ13224 1484 aa8.65□□□□□ -1.02
PRDM2-202ENST00000311066 HSP90AA1P07900 732 aaKnown RBP8.65□□□□□ -1.03
PRDM2-202ENST00000311066 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
PRDM2-202ENST00000311066 CFTRP13569 1480 aa8.64□□□□□ -1.03
PRDM2-202ENST00000311066 MIER1Q8N108 512 aa8.64□□□□□ -1.03
PRDM2-202ENST00000311066 MORC1Q86VD1 984 aa8.64□□□□□ -1.03
PRDM2-202ENST00000311066 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
PRDM2-202ENST00000311066 RUSC2Q8N2Y8 1516 aa8.64□□□□□ -1.03
PRDM2-202ENST00000311066 NESP48681 1621 aa8.63□□□□□ -1.03
PRDM2-202ENST00000311066 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
PRDM2-202ENST00000311066 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
PRDM2-202ENST00000311066 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
PRDM2-202ENST00000311066 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
PRDM2-202ENST00000311066 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
PRDM2-202ENST00000311066 NPHP1O15259 732 aa8.62□□□□□ -1.03
PRDM2-202ENST00000311066 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
PRDM2-202ENST00000311066 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
PRDM2-202ENST00000311066 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
PRDM2-202ENST00000311066 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
PRDM2-202ENST00000311066 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
PRDM2-202ENST00000311066 HMGXB3Q12766 1538 aa8.6□□□□□ -1.03
PRDM2-202ENST00000311066 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
PRDM2-202ENST00000311066 AEBP2Q6ZN18 517 aaPredicted RBP8.6□□□□□ -1.03
PRDM2-202ENST00000311066 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
PRDM2-202ENST00000311066 PRG4Q92954 1404 aaPredicted RBP8.59□□□□□ -1.03
PRDM2-202ENST00000311066 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
PRDM2-202ENST00000311066 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
PRDM2-202ENST00000311066 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
PRDM2-202ENST00000311066 TERF2IPQ9NYB0 399 aa8.58□□□□□ -1.04
PRDM2-202ENST00000311066 CDK11BP21127 795 aaKnown RBP8.57□□□□□ -1.04
PRDM2-202ENST00000311066 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
PRDM2-202ENST00000311066 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
PRDM2-202ENST00000311066 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
PRDM2-202ENST00000311066 CCDC144AA2RUR9 1427 aa8.56□□□□□ -1.04
PRDM2-202ENST00000311066 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
PRDM2-202ENST00000311066 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
PRDM2-202ENST00000311066 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-202ENST00000311066 CHMP4BQ9H444 224 aaKnown RBP8.55□□□□□ -1.04
PRDM2-202ENST00000311066 KTN1Q86UP2 1357 aaKnown RBP8.55□□□□□ -1.04
PRDM2-202ENST00000311066 TOPBP1Q92547 1522 aa8.55□□□□□ -1.04
PRDM2-202ENST00000311066 MYOM3Q5VTT5 1437 aa8.54□□□□□ -1.04
PRDM2-202ENST00000311066 MS4A1P11836 297 aa8.54□□□□□ -1.04
PRDM2-202ENST00000311066 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
PRDM2-202ENST00000311066 FRAT1Q92837 279 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-202ENST00000311066 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
PRDM2-202ENST00000311066 SYNJ2O15056 1496 aa8.53□□□□□ -1.04
PRDM2-202ENST00000311066 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
PRDM2-202ENST00000311066 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
PRDM2-202ENST00000311066 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRDM2-202ENST00000311066 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
PRDM2-202ENST00000311066 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRDM2-202ENST00000311066 OS9Q13438 667 aaPredicted RBP8.51□□□□□ -1.05
PRDM2-202ENST00000311066 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
PRDM2-202ENST00000311066 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
PRDM2-202ENST00000311066 CALD1Q05682 793 aaKnown RBP8.5□□□□□ -1.05
PRDM2-202ENST00000311066 RALBP1Q15311 655 aa8.5□□□□□ -1.05
PRDM2-202ENST00000311066 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
PRDM2-202ENST00000311066 AMPHP49418 695 aa8.5□□□□□ -1.05
PRDM2-202ENST00000311066 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
PRDM2-202ENST00000311066 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
PRDM2-202ENST00000311066 CASKIN1Q8WXD9 1431 aa8.49□□□□□ -1.05
PRDM2-202ENST00000311066 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
PRDM2-202ENST00000311066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRDM2-202ENST00000311066 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
PRDM2-202ENST00000311066 CHMP4AQ9BY43 222 aa8.48□□□□□ -1.05
PRDM2-202ENST00000311066 ZNF330Q9Y3S2 320 aaPredicted RBP8.48□□□□□ -1.05
PRDM2-202ENST00000311066 FGD6Q6ZV73 1430 aa8.48□□□□□ -1.05
PRDM2-202ENST00000311066 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
PRDM2-202ENST00000311066 CUX1P39880 1505 aa8.47□□□□□ -1.05
PRDM2-202ENST00000311066 DNMBPQ6XZF7 1577 aa8.47□□□□□ -1.05
PRDM2-202ENST00000311066 CCER2I3L3R5 266 aa8.46□□□□□ -1.05
PRDM2-202ENST00000311066 LTV1Q96GA3 475 aaPredicted RBP8.46□□□□□ -1.05
PRDM2-202ENST00000311066 MINK1Q8N4C8 1332 aaPredicted RBP8.46□□□□□ -1.05
PRDM2-202ENST00000311066 ARHGAP5Q13017 1502 aa8.46□□□□□ -1.05
PRDM2-202ENST00000311066 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.06
PRDM2-202ENST00000311066 FYCO1Q9BQS8 1478 aa8.46□□□□□ -1.06
PRDM2-202ENST00000311066 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 COG3Q96JB2 828 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 ST20-MTHFSA0A0A6YYL1 179 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 SUPT16HQ9Y5B9 1047 aaKnown RBP8.45□□□□□ -1.06
PRDM2-202ENST00000311066 LAMC3Q9Y6N6 1575 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 NCOA2Q15596 1464 aa8.45□□□□□ -1.06
PRDM2-202ENST00000311066 SYNJ1O43426 1573 aa8.44□□□□□ -1.06
PRDM2-202ENST00000311066 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
PRDM2-202ENST00000311066 IPO8O15397 1037 aaKnown RBP8.44□□□□□ -1.06
PRDM2-202ENST00000311066 KIAA0586Q9BVV6 1533 aa8.44□□□□□ -1.06
PRDM2-202ENST00000311066 STK31Q9BXU1 1019 aa8.43□□□□□ -1.06
PRDM2-202ENST00000311066 KIF21BO75037 1637 aa8.43□□□□□ -1.06
PRDM2-202ENST00000311066 ATF3P18847 181 aa8.43□□□□□ -1.06
PRDM2-202ENST00000311066 LMOD3Q0VAK6 560 aa8.43□□□□□ -1.06
PRDM2-202ENST00000311066 PHLDB1Q86UU1 1377 aa8.43□□□□□ -1.06
PRDM2-202ENST00000311066 LRRC9Q6ZRR7 1453 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms