RNA–Protein interactions for RNA: ENST00000306384.4

VAMP5-201, Transcript of vesicle associated membrane protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP5, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-201ENST00000306384 ZFYVE16Q7Z3T8 1539 aa28.77■■■□□ 2.2
VAMP5-201ENST00000306384 POGZQ7Z3K3 1410 aa28.77■■■□□ 2.2
VAMP5-201ENST00000306384 PTPRMP28827 1452 aa28.76■■■□□ 2.19
VAMP5-201ENST00000306384 CCDC18Q5T9S5 1454 aa28.74■■■□□ 2.19
VAMP5-201ENST00000306384 MAGI2Q86UL8 1455 aa28.74■■■□□ 2.19
VAMP5-201ENST00000306384 SCAPERQ9BY12 1400 aa28.74■■■□□ 2.19
VAMP5-201ENST00000306384 YEATS2Q9ULM3 1422 aa28.74■■■□□ 2.19
VAMP5-201ENST00000306384 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
VAMP5-201ENST00000306384 CLIP1P30622 1438 aa28.73■■■□□ 2.19
VAMP5-201ENST00000306384 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
VAMP5-201ENST00000306384 RIMS1Q86UR5 1692 aaKnown RBP28.7■■■□□ 2.18
VAMP5-201ENST00000306384 PREX2Q70Z35 1606 aa28.69■■■□□ 2.18
VAMP5-201ENST00000306384 ARHGAP5Q13017 1502 aa28.69■■■□□ 2.18
VAMP5-201ENST00000306384 ARID4BQ4LE39 1312 aaPredicted RBP28.68■■■□□ 2.18
VAMP5-201ENST00000306384 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
VAMP5-201ENST00000306384 CDC42BPAQ5VT25 1732 aa28.64■■■□□ 2.18
VAMP5-201ENST00000306384 KDM5CP41229 1560 aa28.64■■■□□ 2.18
VAMP5-201ENST00000306384 ZNF518AQ6AHZ1 1483 aa28.61■■■□□ 2.17
VAMP5-201ENST00000306384 FER1L4A9Z1Z3 1794 aa28.59■■■□□ 2.17
VAMP5-201ENST00000306384 ITSN2Q9NZM3 1697 aa28.58■■■□□ 2.16
VAMP5-201ENST00000306384 ATP10AO60312 1499 aa28.57■■■□□ 2.16
VAMP5-201ENST00000306384 ABCC1P33527 1531 aa28.57■■■□□ 2.16
VAMP5-201ENST00000306384 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
VAMP5-201ENST00000306384 DIP2CQ9Y2E4 1556 aa28.53■■■□□ 2.16
VAMP5-201ENST00000306384 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
VAMP5-201ENST00000306384 ABCA6Q8N139 1617 aa28.51■■■□□ 2.15
VAMP5-201ENST00000306384 AFAP1Q8N556 730 aa28.5■■■□□ 2.15
VAMP5-201ENST00000306384 LMTK3Q96Q04 1460 aa28.49■■■□□ 2.15
VAMP5-201ENST00000306384 REREQ9P2R6 1566 aa28.49■■■□□ 2.15
VAMP5-201ENST00000306384 TRAPPC8Q9Y2L5 1435 aa28.47■■■□□ 2.15
VAMP5-201ENST00000306384 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
VAMP5-201ENST00000306384 SAMD9LQ8IVG5 1584 aa28.46■■■□□ 2.15
VAMP5-201ENST00000306384 KIDINS220Q9ULH0 1771 aa28.44■■■□□ 2.14
VAMP5-201ENST00000306384 GPATCH8Q9UKJ3 1502 aaKnown RBP28.43■■■□□ 2.14
VAMP5-201ENST00000306384 MLECQ14165 292 aa28.43■■■□□ 2.14
VAMP5-201ENST00000306384 CEP162Q5TB80 1403 aa28.41■■■□□ 2.14
VAMP5-201ENST00000306384 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
VAMP5-201ENST00000306384 AGLP35573 1532 aa28.35■■■□□ 2.13
VAMP5-201ENST00000306384 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
VAMP5-201ENST00000306384 TIAM1Q13009 1591 aa28.33■■■□□ 2.13
VAMP5-201ENST00000306384 FBXO41Q8TF61 875 aa28.32■■■□□ 2.12
VAMP5-201ENST00000306384 MTUS2Q5JR59 1369 aa28.32■■■□□ 2.12
VAMP5-201ENST00000306384 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
VAMP5-201ENST00000306384 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
VAMP5-201ENST00000306384 MYT1LQ9UL68 1186 aa28.31■■■□□ 2.12
VAMP5-201ENST00000306384 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
VAMP5-201ENST00000306384 CCNB3Q8WWL7 1395 aa28.28■■■□□ 2.12
VAMP5-201ENST00000306384 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
VAMP5-201ENST00000306384 KIAA1107Q9UPP5 1409 aa28.27■■■□□ 2.12
VAMP5-201ENST00000306384 C3P01024 1663 aa28.27■■■□□ 2.12
VAMP5-201ENST00000306384 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
VAMP5-201ENST00000306384 ATP7AQ04656 1500 aa28.24■■■□□ 2.11
VAMP5-201ENST00000306384 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
VAMP5-201ENST00000306384 HSPA2P54652 639 aa28.23■■■□□ 2.11
VAMP5-201ENST00000306384 CFDP1Q9UEE9 299 aaPredicted RBP28.23■■■□□ 2.11
VAMP5-201ENST00000306384 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
VAMP5-201ENST00000306384 CEBPAP49715 358 aaPredicted RBP28.21■■■□□ 2.11
VAMP5-201ENST00000306384 PLXNC1O60486 1568 aa28.2■■■□□ 2.11
VAMP5-201ENST00000306384 SETD1BQ9UPS6 1966 aaKnown RBP28.19■■■□□ 2.1
VAMP5-201ENST00000306384 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
VAMP5-201ENST00000306384 MROH2AA6NES4 1674 aa28.16■■■□□ 2.1
VAMP5-201ENST00000306384 ADGBQ8N7X0 1667 aa28.15■■■□□ 2.1
VAMP5-201ENST00000306384 MBD5Q9P267 1494 aa28.15■■■□□ 2.1
VAMP5-201ENST00000306384 ZNF644Q9H582 1327 aaPredicted RBP28.13■■■□□ 2.09
VAMP5-201ENST00000306384 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
VAMP5-201ENST00000306384 NCOA2Q15596 1464 aa28.12■■■□□ 2.09
VAMP5-201ENST00000306384 STRCQ7RTU9 1775 aa28.11■■■□□ 2.09
VAMP5-201ENST00000306384 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
VAMP5-201ENST00000306384 CNTLNQ9NXG0 1405 aa28.1■■■□□ 2.09
VAMP5-201ENST00000306384 A2MP01023 1474 aa28.1■■■□□ 2.09
VAMP5-201ENST00000306384 UHRF1BP1Q6BDS2 1440 aa28.09■■■□□ 2.09
VAMP5-201ENST00000306384 CLTCQ00610 1675 aaKnown RBP28.07■■■□□ 2.08
VAMP5-201ENST00000306384 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
VAMP5-201ENST00000306384 RTEL1-TNFRSF6BF6WH68 1400 aa28.03■■■□□ 2.08
VAMP5-201ENST00000306384 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
VAMP5-201ENST00000306384 ESF1Q9H501 851 aaKnown RBP28.02■■■□□ 2.08
VAMP5-201ENST00000306384 CCDC141Q6ZP82 1450 aa28■■■□□ 2.07
VAMP5-201ENST00000306384 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
VAMP5-201ENST00000306384 ARHGEF5Q12774 1597 aa27.98■■■□□ 2.07
VAMP5-201ENST00000306384 NPATQ14207 1427 aa27.97■■■□□ 2.07
VAMP5-201ENST00000306384 ZMYM3Q14202 1370 aa27.96■■■□□ 2.07
VAMP5-201ENST00000306384 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
VAMP5-201ENST00000306384 MYO3AQ8NEV4 1616 aa27.92■■■□□ 2.06
VAMP5-201ENST00000306384 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
VAMP5-201ENST00000306384 PTPRKQ15262 1439 aa27.88■■■□□ 2.05
VAMP5-201ENST00000306384 GGT6Q6P531 493 aa27.88■■■□□ 2.05
VAMP5-201ENST00000306384 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
VAMP5-201ENST00000306384 MAST1Q9Y2H9 1570 aa27.86■■■□□ 2.05
VAMP5-201ENST00000306384 NCOA1Q15788 1441 aa27.86■■■□□ 2.05
VAMP5-201ENST00000306384 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
VAMP5-201ENST00000306384 CAMSAP1Q5T5Y3 1602 aa27.85■■■□□ 2.05
VAMP5-201ENST00000306384 PTPRTO14522 1441 aa27.84■■■□□ 2.05
VAMP5-201ENST00000306384 PPP6R1Q9UPN7 881 aa27.84■■■□□ 2.05
VAMP5-201ENST00000306384 DMRT2Q9Y5R5 561 aa27.83■■■□□ 2.05
VAMP5-201ENST00000306384 FAM135AQ9P2D6 1515 aa27.82■■■□□ 2.04
VAMP5-201ENST00000306384 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
VAMP5-201ENST00000306384 CERKQ8TCT0 537 aa27.82■■■□□ 2.04
VAMP5-201ENST00000306384 MYOM3Q5VTT5 1437 aa27.82■■■□□ 2.04
VAMP5-201ENST00000306384 KDM5DQ9BY66 1539 aa27.81■■■□□ 2.04
VAMP5-201ENST00000306384 MIA2Q96PC5 1412 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms