RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 EFCAB2Q5VUJ9 269 aa13.06□□□□□ -0.32
PRPF8-201ENST00000304992 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■■■□□ 16.7
PRPF8-201ENST00000304992 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
PRPF8-201ENST00000304992 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
PRPF8-201ENST00000304992 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
PRPF8-201ENST00000304992 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
PRPF8-201ENST00000304992 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
PRPF8-201ENST00000304992 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
PRPF8-201ENST00000304992 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-201ENST00000304992 NUP155O75694 1391 aa13.02□□□□□ -0.32
PRPF8-201ENST00000304992 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
PRPF8-201ENST00000304992 CLSTN1O94985 981 aa13.01□□□□□ -0.33
PRPF8-201ENST00000304992 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-201ENST00000304992 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■□□□□ 8.3
PRPF8-201ENST00000304992 EID1Q9Y6B2 187 aa13.01□□□□□ -0.33
PRPF8-201ENST00000304992 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
PRPF8-201ENST00000304992 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
PRPF8-201ENST00000304992 MS4A1P11836 297 aa13□□□□□ -0.33
PRPF8-201ENST00000304992 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
PRPF8-201ENST00000304992 WASHC2CQ9Y4E1 1318 aa13□□□□□ -0.33
PRPF8-201ENST00000304992 CCDC88BA6NC98 1476 aa13□□□□□ -0.33
PRPF8-201ENST00000304992 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
PRPF8-201ENST00000304992 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
PRPF8-201ENST00000304992 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
PRPF8-201ENST00000304992 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
PRPF8-201ENST00000304992 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
PRPF8-201ENST00000304992 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
PRPF8-201ENST00000304992 DNTTIP2Q5QJE6 756 aaKnown RBP12.97□□□□□ -0.33
PRPF8-201ENST00000304992 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
PRPF8-201ENST00000304992 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.33
PRPF8-201ENST00000304992 SPAG9O60271 1321 aaKnown RBP12.96□□□□□ -0.33
PRPF8-201ENST00000304992 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
PRPF8-201ENST00000304992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF8-201ENST00000304992 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-201ENST00000304992 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
PRPF8-201ENST00000304992 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
PRPF8-201ENST00000304992 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
PRPF8-201ENST00000304992 PPP4R2Q9NY27 417 aa12.94□□□□□ -0.34
PRPF8-201ENST00000304992 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
PRPF8-201ENST00000304992 ANP32EQ9BTT0 268 aa12.93□□□□□ -0.34
PRPF8-201ENST00000304992 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
PRPF8-201ENST00000304992 AMPHP49418 695 aa12.92□□□□□ -0.34
PRPF8-201ENST00000304992 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
PRPF8-201ENST00000304992 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
PRPF8-201ENST00000304992 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
PRPF8-201ENST00000304992 TAF7LQ5H9L4 462 aa12.91□□□□□ -0.34
PRPF8-201ENST00000304992 FHOD3Q2V2M9 1422 aa12.9□□□□□ -0.34
PRPF8-201ENST00000304992 FMN1Q68DA7 1419 aa12.9□□□□□ -0.34
PRPF8-201ENST00000304992 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
PRPF8-201ENST00000304992 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
PRPF8-201ENST00000304992 G3V3G9 751 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 MCCP23508 829 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
PRPF8-201ENST00000304992 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
PRPF8-201ENST00000304992 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
PRPF8-201ENST00000304992 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
PRPF8-201ENST00000304992 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
PRPF8-201ENST00000304992 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
PRPF8-201ENST00000304992 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
PRPF8-201ENST00000304992 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-201ENST00000304992 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
PRPF8-201ENST00000304992 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
PRPF8-201ENST00000304992 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
PRPF8-201ENST00000304992 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
PRPF8-201ENST00000304992 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
PRPF8-201ENST00000304992 MSH5O43196 834 aa12.85□□□□□ -0.35
PRPF8-201ENST00000304992 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
PRPF8-201ENST00000304992 EVA1CP58658 441 aa12.84□□□□□ -0.35
PRPF8-201ENST00000304992 WIZO95785 1651 aa12.84□□□□□ -0.35
PRPF8-201ENST00000304992 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
PRPF8-201ENST00000304992 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
PRPF8-201ENST00000304992 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
PRPF8-201ENST00000304992 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
PRPF8-201ENST00000304992 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
PRPF8-201ENST00000304992 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
PRPF8-201ENST00000304992 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
PRPF8-201ENST00000304992 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
PRPF8-201ENST00000304992 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
PRPF8-201ENST00000304992 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
PRPF8-201ENST00000304992 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
PRPF8-201ENST00000304992 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
PRPF8-201ENST00000304992 RALBP1Q15311 655 aa12.79□□□□□ -0.36
PRPF8-201ENST00000304992 MEX3CQ5U5Q3 659 aaKnown RBP12.79□□□□□ -0.36
PRPF8-201ENST00000304992 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
PRPF8-201ENST00000304992 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-201ENST00000304992 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-201ENST00000304992 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
PRPF8-201ENST00000304992 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
PRPF8-201ENST00000304992 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
PRPF8-201ENST00000304992 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-201ENST00000304992 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.36
PRPF8-201ENST00000304992 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.36
PRPF8-201ENST00000304992 PTPRGP23470 1445 aa12.77□□□□□ -0.36
PRPF8-201ENST00000304992 TOMM22Q9NS69 142 aa12.77□□□□□ -0.36
PRPF8-201ENST00000304992 NRDCO43847 1150 aa12.77□□□□□ -0.37
PRPF8-201ENST00000304992 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
PRPF8-201ENST00000304992 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms