RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 ABCC9O60706 1549 aa13.67□□□□□ -0.22
MECP2-201ENST00000303391 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
MECP2-201ENST00000303391 RCAN3Q9UKA8 241 aa13.66□□□□□ -0.22
MECP2-201ENST00000303391 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
MECP2-201ENST00000303391 CHMP4CQ96CF2 233 aa13.66□□□□□ -0.22
MECP2-201ENST00000303391 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
MECP2-201ENST00000303391 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
MECP2-201ENST00000303391 CCDC70Q6NSX1 233 aa13.65□□□□□ -0.22
MECP2-201ENST00000303391 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
MECP2-201ENST00000303391 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
MECP2-201ENST00000303391 ATP6V1DQ9Y5K8 247 aa13.64□□□□□ -0.23
MECP2-201ENST00000303391 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
MECP2-201ENST00000303391 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
MECP2-201ENST00000303391 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
MECP2-201ENST00000303391 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
MECP2-201ENST00000303391 ST18O60284 1047 aa13.62□□□□□ -0.23
MECP2-201ENST00000303391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.23
MECP2-201ENST00000303391 TMF1P82094 1093 aa13.61□□□□□ -0.23
MECP2-201ENST00000303391 CWC15Q9P013 229 aaKnown RBP13.61□□□□□ -0.23
MECP2-201ENST00000303391 TPM2P07951 284 aa13.61□□□□□ -0.23
MECP2-201ENST00000303391 TPM3P06753 285 aa13.61□□□□□ -0.23
MECP2-201ENST00000303391 CCDC66A2RUB6 948 aa13.61□□□□□ -0.23
MECP2-201ENST00000303391 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
MECP2-201ENST00000303391 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
MECP2-201ENST00000303391 TAF3Q5VWG9 929 aa13.6□□□□□ -0.23
MECP2-201ENST00000303391 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
MECP2-201ENST00000303391 GZF1Q9H116 711 aaPredicted RBP13.6□□□□□ -0.23
MECP2-201ENST00000303391 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
MECP2-201ENST00000303391 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
MECP2-201ENST00000303391 SLKQ9H2G2 1235 aaPredicted RBP13.58□□□□□ -0.23
MECP2-201ENST00000303391 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
MECP2-201ENST00000303391 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
MECP2-201ENST00000303391 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
MECP2-201ENST00000303391 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
MECP2-201ENST00000303391 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
MECP2-201ENST00000303391 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
MECP2-201ENST00000303391 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
MECP2-201ENST00000303391 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
MECP2-201ENST00000303391 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
MECP2-201ENST00000303391 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
MECP2-201ENST00000303391 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
MECP2-201ENST00000303391 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
MECP2-201ENST00000303391 HMMRO75330 724 aa13.54□□□□□ -0.24
MECP2-201ENST00000303391 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
MECP2-201ENST00000303391 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
MECP2-201ENST00000303391 TPM1P09493 284 aa13.53□□□□□ -0.24
MECP2-201ENST00000303391 NACADO15069 1562 aa13.52□□□□□ -0.25
MECP2-201ENST00000303391 AAMPQ13685 434 aa13.52□□□□□ -0.25
MECP2-201ENST00000303391 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
MECP2-201ENST00000303391 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
MECP2-201ENST00000303391 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.25
MECP2-201ENST00000303391 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
MECP2-201ENST00000303391 ARID3AQ99856 593 aa13.51□□□□□ -0.25
MECP2-201ENST00000303391 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
MECP2-201ENST00000303391 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
MECP2-201ENST00000303391 KANK1Q14678 1352 aa13.51□□□□□ -0.25
MECP2-201ENST00000303391 GOLGA6L19H0YKK7 550 aa13.5□□□□□ -0.25
MECP2-201ENST00000303391 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
MECP2-201ENST00000303391 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
MECP2-201ENST00000303391 CDR1P51861 262 aa13.49□□□□□ -0.25
MECP2-201ENST00000303391 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
MECP2-201ENST00000303391 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
MECP2-201ENST00000303391 RRP9O43818 475 aaKnown RBP13.49□□□□□ -0.25
MECP2-201ENST00000303391 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
MECP2-201ENST00000303391 APPP05067 770 aa13.48□□□□□ -0.25
MECP2-201ENST00000303391 AK7Q96M32 723 aa13.48□□□□□ -0.25
MECP2-201ENST00000303391 KIF15Q9NS87 1388 aa13.47□□□□□ -0.25
MECP2-201ENST00000303391 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
MECP2-201ENST00000303391 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.26
MECP2-201ENST00000303391 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
MECP2-201ENST00000303391 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
MECP2-201ENST00000303391 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
MECP2-201ENST00000303391 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
MECP2-201ENST00000303391 MRE11P49959 708 aa13.45□□□□□ -0.26
MECP2-201ENST00000303391 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
MECP2-201ENST00000303391 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
MECP2-201ENST00000303391 ITPRIPQ8IWB1 547 aa13.44□□□□□ -0.26
MECP2-201ENST00000303391 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
MECP2-201ENST00000303391 CGNL1Q0VF96 1302 aa13.44□□□□□ -0.26
MECP2-201ENST00000303391 PDE4AP27815 886 aa13.43□□□□□ -0.26
MECP2-201ENST00000303391 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
MECP2-201ENST00000303391 HSP90B2PQ58FF3 399 aa13.43□□□□□ -0.26
MECP2-201ENST00000303391 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
MECP2-201ENST00000303391 HOOK1Q9UJC3 728 aaKnown RBP13.43□□□□□ -0.26
MECP2-201ENST00000303391 MORC1Q86VD1 984 aa13.42□□□□□ -0.26
MECP2-201ENST00000303391 CCP110O43303 1012 aa13.42□□□□□ -0.26
MECP2-201ENST00000303391 CEP89Q96ST8 783 aa13.42□□□□□ -0.26
MECP2-201ENST00000303391 CENPJQ9HC77 1338 aaPredicted RBP13.42□□□□□ -0.26
MECP2-201ENST00000303391 IPO7O95373 1038 aaKnown RBP13.42□□□□□ -0.26
MECP2-201ENST00000303391 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 RDXP35241 583 aaKnown RBP13.41□□□□□ -0.26
MECP2-201ENST00000303391 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
MECP2-201ENST00000303391 BECN2A8MW95 431 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 NUCB2P80303 420 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
MECP2-201ENST00000303391 LMOD3Q0VAK6 560 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 REC8O95072 547 aa13.41□□□□□ -0.26
MECP2-201ENST00000303391 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms