RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 C3P01024 1663 aa11.19□□□□□ -0.62
ITGB1-201ENST00000302278 AGLP35573 1532 aa11.19□□□□□ -0.62
ITGB1-201ENST00000302278 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
ITGB1-201ENST00000302278 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
ITGB1-201ENST00000302278 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
ITGB1-201ENST00000302278 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
ITGB1-201ENST00000302278 ABCA6Q8N139 1617 aa11.17□□□□□ -0.62
ITGB1-201ENST00000302278 KIF14Q15058 1648 aa11.16□□□□□ -0.62
ITGB1-201ENST00000302278 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
ITGB1-201ENST00000302278 PTPRTO14522 1441 aa11.16□□□□□ -0.62
ITGB1-201ENST00000302278 ZNF518AQ6AHZ1 1483 aa11.16□□□□□ -0.62
ITGB1-201ENST00000302278 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.62
ITGB1-201ENST00000302278 LTBP4Q8N2S1 1624 aa11.15□□□□□ -0.62
ITGB1-201ENST00000302278 CDK13Q14004 1512 aaKnown RBP11.15□□□□□ -0.63
ITGB1-201ENST00000302278 CERKQ8TCT0 537 aa11.14□□□□□ -0.63
ITGB1-201ENST00000302278 MLH3Q9UHC1 1453 aa11.14□□□□□ -0.63
ITGB1-201ENST00000302278 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
ITGB1-201ENST00000302278 ABCC1P33527 1531 aa11.12□□□□□ -0.63
ITGB1-201ENST00000302278 SCAPERQ9BY12 1400 aa11.12□□□□□ -0.63
ITGB1-201ENST00000302278 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
ITGB1-201ENST00000302278 PLEKHD1A6NEE1 506 aa11.12□□□□□ -0.63
ITGB1-201ENST00000302278 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
ITGB1-201ENST00000302278 FMN1Q68DA7 1419 aa11.1□□□□□ -0.63
ITGB1-201ENST00000302278 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
ITGB1-201ENST00000302278 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
ITGB1-201ENST00000302278 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
ITGB1-201ENST00000302278 TROQ12816 1431 aaPredicted RBP11.08□□□□□ -0.64
ITGB1-201ENST00000302278 UHRF1BP1Q6BDS2 1440 aa11.08□□□□□ -0.64
ITGB1-201ENST00000302278 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
ITGB1-201ENST00000302278 NPATQ14207 1427 aa11.07□□□□□ -0.64
ITGB1-201ENST00000302278 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
ITGB1-201ENST00000302278 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
ITGB1-201ENST00000302278 CNTLNQ9NXG0 1405 aa11.06□□□□□ -0.64
ITGB1-201ENST00000302278 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
ITGB1-201ENST00000302278 HSPA2P54652 639 aa11.05□□□□□ -0.64
ITGB1-201ENST00000302278 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
ITGB1-201ENST00000302278 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
ITGB1-201ENST00000302278 MYO3AQ8NEV4 1616 aa11.05□□□□□ -0.64
ITGB1-201ENST00000302278 ARHGAP5Q13017 1502 aa11.05□□□□□ -0.64
ITGB1-201ENST00000302278 CCDC18Q5T9S5 1454 aa11.04□□□□□ -0.64
ITGB1-201ENST00000302278 TRAPPC8Q9Y2L5 1435 aa11.03□□□□□ -0.64
ITGB1-201ENST00000302278 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
ITGB1-201ENST00000302278 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
ITGB1-201ENST00000302278 SOCS7O14512 581 aa11.02□□□□□ -0.65
ITGB1-201ENST00000302278 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
ITGB1-201ENST00000302278 CLIP1P30622 1438 aa11.02□□□□□ -0.65
ITGB1-201ENST00000302278 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.65
ITGB1-201ENST00000302278 ADGBQ8N7X0 1667 aa11.01□□□□□ -0.65
ITGB1-201ENST00000302278 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
ITGB1-201ENST00000302278 POLR1AO95602 1720 aaPredicted RBP11□□□□□ -0.65
ITGB1-201ENST00000302278 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
ITGB1-201ENST00000302278 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
ITGB1-201ENST00000302278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
ITGB1-201ENST00000302278 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
ITGB1-201ENST00000302278 CLTCQ00610 1675 aaKnown RBP10.99□□□□□ -0.65
ITGB1-201ENST00000302278 CASKIN1Q8WXD9 1431 aa10.98□□□□□ -0.65
ITGB1-201ENST00000302278 CEP170BQ9Y4F5 1589 aaPredicted RBP10.98□□□□□ -0.65
ITGB1-201ENST00000302278 ILDR2Q71H61 639 aa10.97□□□□□ -0.65
ITGB1-201ENST00000302278 FYCO1Q9BQS8 1478 aa10.96□□□□□ -0.65
ITGB1-201ENST00000302278 ATP7AQ04656 1500 aa10.96□□□□□ -0.66
ITGB1-201ENST00000302278 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.66
ITGB1-201ENST00000302278 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
ITGB1-201ENST00000302278 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
ITGB1-201ENST00000302278 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
ITGB1-201ENST00000302278 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
ITGB1-201ENST00000302278 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
ITGB1-201ENST00000302278 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
ITGB1-201ENST00000302278 SYCP2Q9BX26 1530 aa10.93□□□□□ -0.66
ITGB1-201ENST00000302278 DEPDC5O75140 1603 aa10.92□□□□□ -0.66
ITGB1-201ENST00000302278 CEBPAP49715 358 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-201ENST00000302278 AFAP1Q8N556 730 aa10.91□□□□□ -0.66
ITGB1-201ENST00000302278 CPS1P31327 1500 aa10.91□□□□□ -0.66
ITGB1-201ENST00000302278 GPATCH8Q9UKJ3 1502 aaKnown RBP10.91□□□□□ -0.66
ITGB1-201ENST00000302278 MLECQ14165 292 aa10.91□□□□□ -0.66
ITGB1-201ENST00000302278 A2ML1A8K2U0 1454 aa10.89□□□□□ -0.67
ITGB1-201ENST00000302278 ALKQ9UM73 1620 aa10.89□□□□□ -0.67
ITGB1-201ENST00000302278 A2MP01023 1474 aa10.89□□□□□ -0.67
ITGB1-201ENST00000302278 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
ITGB1-201ENST00000302278 MED1Q15648 1581 aaPredicted RBP10.89□□□□□ -0.67
ITGB1-201ENST00000302278 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
ITGB1-201ENST00000302278 VWDEQ8N2E2 1590 aa10.88□□□□□ -0.67
ITGB1-201ENST00000302278 SYNMO15061 1565 aa10.87□□□□□ -0.67
ITGB1-201ENST00000302278 RTEL1-TNFRSF6BF6WH68 1400 aa10.87□□□□□ -0.67
ITGB1-201ENST00000302278 ZC3H13Q5T200 1668 aaKnown RBP10.87□□□□□ -0.67
ITGB1-201ENST00000302278 PKD2Q13563 968 aa10.87□□□□□ -0.67
ITGB1-201ENST00000302278 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
ITGB1-201ENST00000302278 MED14O60244 1454 aa10.87□□□□□ -0.67
ITGB1-201ENST00000302278 RNF17Q9BXT8 1623 aaKnown RBP10.86□□□□□ -0.67
ITGB1-201ENST00000302278 KDM5DQ9BY66 1539 aa10.85□□□□□ -0.67
ITGB1-201ENST00000302278 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
ITGB1-201ENST00000302278 PZPP20742 1482 aa10.84□□□□□ -0.67
ITGB1-201ENST00000302278 STRCP1A6NGW2 1772 aa10.83□□□□□ -0.68
ITGB1-201ENST00000302278 EHBP1L1Q8N3D4 1523 aa10.83□□□□□ -0.68
ITGB1-201ENST00000302278 EIF2AK4Q9P2K8 1649 aaKnown RBP10.83□□□□□ -0.68
ITGB1-201ENST00000302278 IQGAP1P46940 1657 aa10.82□□□□□ -0.68
ITGB1-201ENST00000302278 ARHGEF5Q12774 1597 aa10.82□□□□□ -0.68
ITGB1-201ENST00000302278 MAST1Q9Y2H9 1570 aa10.82□□□□□ -0.68
ITGB1-201ENST00000302278 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
ITGB1-201ENST00000302278 NLRP1Q9C000 1473 aa10.8□□□□□ -0.68
ITGB1-201ENST00000302278 SHANK2Q9UPX8 1470 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms