RNA–Protein interactions for RNA: ENST00000299667.8

ZNF3-202, Transcript of zinc finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF3, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-202ENST00000299667 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
ZNF3-202ENST00000299667 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
ZNF3-202ENST00000299667 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
ZNF3-202ENST00000299667 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
ZNF3-202ENST00000299667 ZBED9Q6R2W3 1325 aa11.67□□□□□ -0.54
ZNF3-202ENST00000299667 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
ZNF3-202ENST00000299667 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
ZNF3-202ENST00000299667 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
ZNF3-202ENST00000299667 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.55
ZNF3-202ENST00000299667 TCOF1Q13428 1488 aaKnown RBP11.64□□□□□ -0.55
ZNF3-202ENST00000299667 ZNF326Q5BKZ1 582 aaKnown RBP11.63□□□□□ -0.55
ZNF3-202ENST00000299667 ANKRD30BQ9BXX2 1392 aa11.63□□□□□ -0.55
ZNF3-202ENST00000299667 HECW1Q76N89 1606 aa11.63□□□□□ -0.55
ZNF3-202ENST00000299667 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
ZNF3-202ENST00000299667 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
ZNF3-202ENST00000299667 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
ZNF3-202ENST00000299667 EPRSP07814 1512 aaKnown RBP11.61□□□□□ -0.55
ZNF3-202ENST00000299667 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
ZNF3-202ENST00000299667 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
ZNF3-202ENST00000299667 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
ZNF3-202ENST00000299667 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
ZNF3-202ENST00000299667 RPRD2Q5VT52 1461 aaKnown RBP11.59□□□□□ -0.55
ZNF3-202ENST00000299667 MIA2Q96PC5 1412 aa11.59□□□□□ -0.55
ZNF3-202ENST00000299667 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
ZNF3-202ENST00000299667 NBR1Q14596 966 aa11.59□□□□□ -0.55
ZNF3-202ENST00000299667 SPATA31E1Q6ZUB1 1445 aa11.58□□□□□ -0.55
ZNF3-202ENST00000299667 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
ZNF3-202ENST00000299667 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
ZNF3-202ENST00000299667 DEKP35659 375 aaKnown RBP11.57□□□□□ -0.56
ZNF3-202ENST00000299667 DAPK1P53355 1430 aa11.57□□□□□ -0.56
ZNF3-202ENST00000299667 NOP58Q9Y2X3 529 aaKnown RBP11.56□□□□□ -0.56
ZNF3-202ENST00000299667 ABCC5O15440 1437 aa11.56□□□□□ -0.56
ZNF3-202ENST00000299667 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
ZNF3-202ENST00000299667 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
ZNF3-202ENST00000299667 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
ZNF3-202ENST00000299667 SMG6Q86US8 1419 aaKnown RBP11.54□□□□□ -0.56
ZNF3-202ENST00000299667 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
ZNF3-202ENST00000299667 ROCK1Q13464 1354 aa11.53□□□□□ -0.56
ZNF3-202ENST00000299667 USP47Q96K76 1375 aa11.53□□□□□ -0.56
ZNF3-202ENST00000299667 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
ZNF3-202ENST00000299667 WDR62O43379 1518 aa11.52□□□□□ -0.56
ZNF3-202ENST00000299667 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
ZNF3-202ENST00000299667 PKD2Q13563 968 aa11.52□□□□□ -0.57
ZNF3-202ENST00000299667 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
ZNF3-202ENST00000299667 SALL2Q9Y467 1007 aaPredicted RBP11.5□□□□□ -0.57
ZNF3-202ENST00000299667 CFDP1Q9UEE9 299 aaPredicted RBP11.5□□□□□ -0.57
ZNF3-202ENST00000299667 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
ZNF3-202ENST00000299667 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
ZNF3-202ENST00000299667 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
ZNF3-202ENST00000299667 PZPP20742 1482 aa11.49□□□□□ -0.57
ZNF3-202ENST00000299667 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
ZNF3-202ENST00000299667 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
ZNF3-202ENST00000299667 BCORL1Q5H9F3 1711 aa11.48□□□□□ -0.57
ZNF3-202ENST00000299667 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
ZNF3-202ENST00000299667 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
ZNF3-202ENST00000299667 CARD11Q9BXL7 1154 aa11.47□□□□□ -0.57
ZNF3-202ENST00000299667 PRG4Q92954 1404 aaPredicted RBP11.47□□□□□ -0.57
ZNF3-202ENST00000299667 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
ZNF3-202ENST00000299667 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.58
ZNF3-202ENST00000299667 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
ZNF3-202ENST00000299667 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
ZNF3-202ENST00000299667 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
ZNF3-202ENST00000299667 EXOC6Q8TAG9 804 aa11.45□□□□□ -0.58
ZNF3-202ENST00000299667 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
ZNF3-202ENST00000299667 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
ZNF3-202ENST00000299667 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
ZNF3-202ENST00000299667 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
ZNF3-202ENST00000299667 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
ZNF3-202ENST00000299667 CAMSAP2Q08AD1 1489 aa11.42□□□□□ -0.58
ZNF3-202ENST00000299667 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
ZNF3-202ENST00000299667 ARID4BQ4LE39 1312 aaPredicted RBP11.42□□□□□ -0.58
ZNF3-202ENST00000299667 NUP155O75694 1391 aa11.41□□□□□ -0.58
ZNF3-202ENST00000299667 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
ZNF3-202ENST00000299667 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
ZNF3-202ENST00000299667 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
ZNF3-202ENST00000299667 RCAN3Q9UKA8 241 aa11.4□□□□□ -0.58
ZNF3-202ENST00000299667 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
ZNF3-202ENST00000299667 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
ZNF3-202ENST00000299667 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.59
ZNF3-202ENST00000299667 KDM5CP41229 1560 aa11.4□□□□□ -0.59
ZNF3-202ENST00000299667 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
ZNF3-202ENST00000299667 ROCK2O75116 1388 aaKnown RBP11.39□□□□□ -0.59
ZNF3-202ENST00000299667 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
ZNF3-202ENST00000299667 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
ZNF3-202ENST00000299667 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
ZNF3-202ENST00000299667 LRPPRCP42704 1394 aaKnown RBP11.38□□□□□ -0.59
ZNF3-202ENST00000299667 KIAA0586Q9BVV6 1533 aa11.38□□□□□ -0.59
ZNF3-202ENST00000299667 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
ZNF3-202ENST00000299667 RALBP1Q15311 655 aa11.38□□□□□ -0.59
ZNF3-202ENST00000299667 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
ZNF3-202ENST00000299667 FBLN2P98095 1184 aa11.38□□□□□ -0.59
ZNF3-202ENST00000299667 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
ZNF3-202ENST00000299667 PLIN1O60240 522 aa11.37□□□□□ -0.59
ZNF3-202ENST00000299667 PDE4AP27815 886 aa11.37□□□□□ -0.59
ZNF3-202ENST00000299667 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
ZNF3-202ENST00000299667 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
ZNF3-202ENST00000299667 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
ZNF3-202ENST00000299667 KIF14Q15058 1648 aa11.37□□□□□ -0.59
ZNF3-202ENST00000299667 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
ZNF3-202ENST00000299667 RALGAPBQ86X10 1494 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms