RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 U2SURPO15042 1029 aaKnown RBP7.07□□□□□ -1.28
CPSF2-201ENST00000298875 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
CPSF2-201ENST00000298875 WRNQ14191 1432 aaPredicted RBP eCLIP7.06□□□□□ -1.28
CPSF2-201ENST00000298875 CFAP44Q96MT7 982 aa7.06□□□□□ -1.28
CPSF2-201ENST00000298875 PNNQ9H307 717 aaKnown RBP7.06□□□□□ -1.28
CPSF2-201ENST00000298875 NUDCQ9Y266 331 aa7.06□□□□□ -1.28
CPSF2-201ENST00000298875 MS4A1P11836 297 aa7.06□□□□□ -1.28
CPSF2-201ENST00000298875 LMOD2Q6P5Q4 547 aa7.06□□□□□ -1.28
CPSF2-201ENST00000298875 KIF27Q86VH2 1401 aa7.06□□□□□ -1.28
CPSF2-201ENST00000298875 POGKQ9P215 609 aa7.05□□□□□ -1.28
CPSF2-201ENST00000298875 NCAPD3P42695 1498 aa7.05□□□□□ -1.28
CPSF2-201ENST00000298875 ISY1Q9ULR0 285 aaKnown RBP7.04□□□□□ -1.28
CPSF2-201ENST00000298875 SETQ01105 290 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-201ENST00000298875 TNNT3P45378 269 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-201ENST00000298875 FOXD1Q16676 465 aa7.04□□□□□ -1.28
CPSF2-201ENST00000298875 MTERF4Q7Z6M4 381 aaKnown RBP7.03□□□□□ -1.28
CPSF2-201ENST00000298875 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
CPSF2-201ENST00000298875 TRHP20396 242 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-201ENST00000298875 PLEKHD1A6NEE1 506 aa7.02□□□□□ -1.28
CPSF2-201ENST00000298875 GOLGA6L3A6NEY3 463 aa7.02□□□□□ -1.29
CPSF2-201ENST00000298875 APBB1O00213 710 aa7.02□□□□□ -1.29
CPSF2-201ENST00000298875 EIF4G1Q04637 1599 aaKnown RBP7.02□□□□□ -1.29
CPSF2-201ENST00000298875 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
CPSF2-201ENST00000298875 GOLGA6L1Q8N7Z2 621 aa7.01□□□□□ -1.29
CPSF2-201ENST00000298875 CFDP1Q9UEE9 299 aaPredicted RBP7.01□□□□□ -1.29
CPSF2-201ENST00000298875 RBM19Q9Y4C8 960 aaKnown RBP7.01□□□□□ -1.29
CPSF2-201ENST00000298875 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
CPSF2-201ENST00000298875 HMGXB3Q12766 1538 aa7□□□□□ -1.29
CPSF2-201ENST00000298875 PDE4CQ08493 712 aa7□□□□□ -1.29
CPSF2-201ENST00000298875 SOX12O15370 315 aa7□□□□□ -1.29
CPSF2-201ENST00000298875 SIN3AQ96ST3 1273 aa6.99□□□□□ -1.29
CPSF2-201ENST00000298875 MAP7D2Q96T17 732 aa6.99□□□□□ -1.29
CPSF2-201ENST00000298875 AEBP2Q6ZN18 517 aaPredicted RBP6.99□□□□□ -1.29
CPSF2-201ENST00000298875 KTN1Q86UP2 1357 aaKnown RBP6.99□□□□□ -1.29
CPSF2-201ENST00000298875 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
CPSF2-201ENST00000298875 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
CPSF2-201ENST00000298875 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
CPSF2-201ENST00000298875 TPM4P67936 248 aa6.99□□□□□ -1.29
CPSF2-201ENST00000298875 ITPRIPQ8IWB1 547 aa6.98□□□□□ -1.29
CPSF2-201ENST00000298875 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
CPSF2-201ENST00000298875 MORC1Q86VD1 984 aa6.98□□□□□ -1.29
CPSF2-201ENST00000298875 HTATSF1O43719 755 aaKnown RBP6.98□□□□□ -1.29
CPSF2-201ENST00000298875 TMF1P82094 1093 aa6.97□□□□□ -1.29
CPSF2-201ENST00000298875 ATAD2BQ9ULI0 1458 aa6.97□□□□□ -1.29
CPSF2-201ENST00000298875 SRPK2P78362 688 aaKnown RBP6.97□□□□□ -1.29
CPSF2-201ENST00000298875 KANK1Q14678 1352 aa6.97□□□□□ -1.29
CPSF2-201ENST00000298875 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
CPSF2-201ENST00000298875 RTF1Q92541 710 aaKnown RBP6.97□□□□□ -1.29
CPSF2-201ENST00000298875 RSPH4AQ5TD94 716 aa6.96□□□□□ -1.29
CPSF2-201ENST00000298875 TAF3Q5VWG9 929 aa6.96□□□□□ -1.29
CPSF2-201ENST00000298875 MFAP1P55081 439 aaKnown RBP6.96□□□□□ -1.29
CPSF2-201ENST00000298875 KRI1Q8N9T8 703 aaKnown RBP6.96□□□□□ -1.3
CPSF2-201ENST00000298875 NOL8Q76FK4 1167 aaKnown RBP6.96□□□□□ -1.3
CPSF2-201ENST00000298875 FOXD4L1Q9NU39 408 aa6.95□□□□□ -1.3
CPSF2-201ENST00000298875 SAFB2Q14151 953 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 HSP90AA2PQ14568 343 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 FHAD1B1AJZ9 1412 aa6.95□□□□□ -1.3
CPSF2-201ENST00000298875 ARHGAP35Q9NRY4 1499 aa6.95□□□□□ -1.3
CPSF2-201ENST00000298875 RWDD1Q9H446 243 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 NOM1Q5C9Z4 860 aaKnown RBP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 CREBRFQ8IUR6 639 aa6.95□□□□□ -1.3
CPSF2-201ENST00000298875 ANO8Q9HCE9 1232 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-201ENST00000298875 HMGB1P09429 215 aaKnown RBP6.94□□□□□ -1.3
CPSF2-201ENST00000298875 CCNB3Q8WWL7 1395 aa6.94□□□□□ -1.3
CPSF2-201ENST00000298875 IPO8O15397 1037 aaKnown RBP6.94□□□□□ -1.3
CPSF2-201ENST00000298875 TRIM6-TRIM34B2RNG4 842 aa6.94□□□□□ -1.3
CPSF2-201ENST00000298875 SMARCA4P51532 1647 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 RASSF8Q8NHQ8 419 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 CSPP1Q1MSJ5 1256 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 PHF14O94880 888 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 ZNF330Q9Y3S2 320 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-201ENST00000298875 SOGA1O94964 1423 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 ROCK2O75116 1388 aaKnown RBP6.93□□□□□ -1.3
CPSF2-201ENST00000298875 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
CPSF2-201ENST00000298875 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 TOP2AP11388 1531 aaKnown RBP6.92□□□□□ -1.3
CPSF2-201ENST00000298875 CHMP3Q9Y3E7 222 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 PMFBP1Q8TBY8 1022 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 GORABQ5T7V8 394 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 FOXD4L5Q5VV16 416 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-201ENST00000298875 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-201ENST00000298875 IPO9Q96P70 1041 aaKnown RBP6.92□□□□□ -1.3
CPSF2-201ENST00000298875 CUX2O14529 1486 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 CCER2I3L3R5 266 aa6.92□□□□□ -1.3
CPSF2-201ENST00000298875 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
CPSF2-201ENST00000298875 TCERG1O14776 1098 aaKnown RBP6.91□□□□□ -1.3
CPSF2-201ENST00000298875 HSPA5P11021 654 aaKnown RBP6.91□□□□□ -1.3
CPSF2-201ENST00000298875 CC2D2AQ9P2K1 1620 aa6.91□□□□□ -1.3
CPSF2-201ENST00000298875 TPM3P06753 285 aa6.91□□□□□ -1.3
CPSF2-201ENST00000298875 TSPYL1Q9H0U9 437 aa6.91□□□□□ -1.3
CPSF2-201ENST00000298875 GPS2Q13227 327 aa6.9□□□□□ -1.3
CPSF2-201ENST00000298875 PATL2C9JE40 543 aaKnown RBP6.9□□□□□ -1.3
CPSF2-201ENST00000298875 TNIKQ9UKE5 1360 aa6.9□□□□□ -1.3
CPSF2-201ENST00000298875 PES1O00541 588 aaKnown RBP6.9□□□□□ -1.3
CPSF2-201ENST00000298875 SETD5Q9C0A6 1442 aa6.9□□□□□ -1.31
CPSF2-201ENST00000298875 CEP89Q96ST8 783 aa6.9□□□□□ -1.31
CPSF2-201ENST00000298875 IFT140Q96RY7 1462 aa6.9□□□□□ -1.31
CPSF2-201ENST00000298875 EIF3AQ14152 1382 aaKnown RBP6.9□□□□□ -1.31
CPSF2-201ENST00000298875 CCDC34Q96HJ3 373 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms