RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 GCC2Q8IWJ2 1684 aa38.58■■■■□ 3.77
PHOX2A-201ENST00000298231 CDK11AQ9UQ88 783 aaPredicted RBP38.58■■■■□ 3.77
PHOX2A-201ENST00000298231 FAM69CQ0P6D2 419 aa38.57■■■■□ 3.76
PHOX2A-201ENST00000298231 ARID3CA6NKF2 412 aa38.56■■■■□ 3.76
PHOX2A-201ENST00000298231 GLI2P10070 1586 aa38.54■■■■□ 3.76
PHOX2A-201ENST00000298231 NAIPQ13075 1403 aa38.53■■■■□ 3.76
PHOX2A-201ENST00000298231 TROQ12816 1431 aaPredicted RBP38.51■■■■□ 3.76
PHOX2A-201ENST00000298231 ITSN2Q9NZM3 1697 aa38.49■■■■□ 3.75
PHOX2A-201ENST00000298231 TIMELESSQ9UNS1 1208 aa38.46■■■■□ 3.75
PHOX2A-201ENST00000298231 DNMT1P26358 1616 aaKnown RBP38.4■■■■□ 3.74
PHOX2A-201ENST00000298231 ACIN1Q9UKV3 1341 aaKnown RBP38.38■■■■□ 3.73
PHOX2A-201ENST00000298231 MAP3K4Q9Y6R4 1608 aa38.36■■■■□ 3.73
PHOX2A-201ENST00000298231 ROCK1Q13464 1354 aa38.33■■■■□ 3.73
PHOX2A-201ENST00000298231 KCNH8Q96L42 1107 aa38.33■■■■□ 3.73
PHOX2A-201ENST00000298231 PLEKHD1A6NEE1 506 aa38.32■■■■□ 3.72
PHOX2A-201ENST00000298231 DAPK1P53355 1430 aa38.29■■■■□ 3.72
PHOX2A-201ENST00000298231 TSPOAP1O95153 1857 aa38.28■■■■□ 3.72
PHOX2A-201ENST00000298231 KIF14Q15058 1648 aa38.27■■■■□ 3.72
PHOX2A-201ENST00000298231 PPRC1Q5VV67 1664 aaKnown RBP38.25■■■■□ 3.71
PHOX2A-201ENST00000298231 ABCA9Q8IUA7 1624 aa38.24■■■■□ 3.71
PHOX2A-201ENST00000298231 GPATCH8Q9UKJ3 1502 aaKnown RBP38.2■■■■□ 3.71
PHOX2A-201ENST00000298231 CD109Q6YHK3 1445 aa38.19■■■■□ 3.7
PHOX2A-201ENST00000298231 CAMSAP2Q08AD1 1489 aa38.19■■■■□ 3.7
PHOX2A-201ENST00000298231 ABCC5O15440 1437 aa38.18■■■■□ 3.7
PHOX2A-201ENST00000298231 ADGBQ8N7X0 1667 aa38.16■■■■□ 3.7
PHOX2A-201ENST00000298231 CROCC2H7BZ55 1655 aa38.15■■■■□ 3.7
PHOX2A-201ENST00000298231 TEX14Q8IWB6 1497 aa38.15■■■■□ 3.7
PHOX2A-201ENST00000298231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.11■■■■□ 3.69
PHOX2A-201ENST00000298231 CDC42BPAQ5VT25 1732 aa38.1■■■■□ 3.69
PHOX2A-201ENST00000298231 SIN3AQ96ST3 1273 aa38.07■■■■□ 3.69
PHOX2A-201ENST00000298231 ADGRL2O95490 1459 aa38.07■■■■□ 3.69
PHOX2A-201ENST00000298231 RRP7BPQ9NSQ0 103 aa38.07■■■■□ 3.68
PHOX2A-201ENST00000298231 KDM6BO15054 1643 aa38.06■■■■□ 3.68
PHOX2A-201ENST00000298231 TTC37Q6PGP7 1564 aa38.05■■■■□ 3.68
PHOX2A-201ENST00000298231 CFDP1Q9UEE9 299 aaPredicted RBP38.04■■■■□ 3.68
PHOX2A-201ENST00000298231 CHIC2Q9UKJ5 165 aa38.02■■■■□ 3.68
PHOX2A-201ENST00000298231 SHANK2Q9UPX8 1470 aa38.01■■■■□ 3.68
PHOX2A-201ENST00000298231 TONSLQ96HA7 1378 aa38■■■■□ 3.67
PHOX2A-201ENST00000298231 NEUROD1Q13562 356 aa38■■■■□ 3.67
PHOX2A-201ENST00000298231 DENND4BO75064 1496 aaPredicted RBP37.95■■■■□ 3.67
PHOX2A-201ENST00000298231 ZNF644Q9H582 1327 aaPredicted RBP37.94■■■■□ 3.66
PHOX2A-201ENST00000298231 PPP1R15AO75807 674 aaPredicted RBP37.94■■■■□ 3.66
PHOX2A-201ENST00000298231 CENPBP07199 599 aaPredicted RBP37.91■■■■□ 3.66
PHOX2A-201ENST00000298231 PREX2Q70Z35 1606 aa37.91■■■■□ 3.66
PHOX2A-201ENST00000298231 NEO1Q92859 1461 aa37.91■■■■□ 3.66
PHOX2A-201ENST00000298231 ARHGEF5Q12774 1597 aa37.9■■■■□ 3.66
PHOX2A-201ENST00000298231 NCOA1Q15788 1441 aa37.89■■■■□ 3.66
PHOX2A-201ENST00000298231 MYO5CQ9NQX4 1742 aa37.88■■■■□ 3.65
PHOX2A-201ENST00000298231 PLCH2O75038 1416 aa37.88■■■■□ 3.65
PHOX2A-201ENST00000298231 ARAP3Q8WWN8 1544 aa37.87■■■■□ 3.65
PHOX2A-201ENST00000298231 COL17A1Q9UMD9 1497 aaPredicted RBP37.87■■■■□ 3.65
PHOX2A-201ENST00000298231 MIER1Q8N108 512 aa37.86■■■■□ 3.65
PHOX2A-201ENST00000298231 CFAP74Q9C0B2 1584 aa37.84■■■■□ 3.65
PHOX2A-201ENST00000298231 FANCAO15360 1455 aa37.83■■■■□ 3.65
PHOX2A-201ENST00000298231 ANKRD30AQ9BXX3 1397 aa37.83■■■■□ 3.65
PHOX2A-201ENST00000298231 TRIM52Q96A61 297 aa37.83■■■■□ 3.65
PHOX2A-201ENST00000298231 MPHOSPH9Q99550 1183 aa37.8■■■■□ 3.64
PHOX2A-201ENST00000298231 CDC42BPBQ9Y5S2 1711 aa37.75■■■■□ 3.63
PHOX2A-201ENST00000298231 C9orf84Q5VXU9 1444 aa37.73■■■■□ 3.63
PHOX2A-201ENST00000298231 ARHGAP5Q13017 1502 aa37.71■■■■□ 3.63
PHOX2A-201ENST00000298231 SAMD9LQ8IVG5 1584 aa37.71■■■■□ 3.63
PHOX2A-201ENST00000298231 EFCAB2Q5VUJ9 269 aa37.7■■■■□ 3.63
PHOX2A-201ENST00000298231 ZNF777Q9ULD5 760 aaPredicted RBP37.7■■■■□ 3.63
PHOX2A-201ENST00000298231 PZPP20742 1482 aa37.68■■■■□ 3.62
PHOX2A-201ENST00000298231 CCDC141Q6ZP82 1450 aa37.68■■■■□ 3.62
PHOX2A-201ENST00000298231 ANKRD30BQ9BXX2 1392 aa37.67■■■■□ 3.62
PHOX2A-201ENST00000298231 RPRD2Q5VT52 1461 aaKnown RBP37.67■■■■□ 3.62
PHOX2A-201ENST00000298231 MBD5Q9P267 1494 aa37.67■■■■□ 3.62
PHOX2A-201ENST00000298231 KDM5DQ9BY66 1539 aa37.65■■■■□ 3.62
PHOX2A-201ENST00000298231 MAST1Q9Y2H9 1570 aa37.64■■■■□ 3.62
PHOX2A-201ENST00000298231 ANKRD50Q9ULJ7 1429 aa37.64■■■■□ 3.62
PHOX2A-201ENST00000298231 RSPH4AQ5TD94 716 aa37.64■■■■□ 3.62
PHOX2A-201ENST00000298231 PLEKHH2Q8IVE3 1493 aa37.64■■■■□ 3.62
PHOX2A-201ENST00000298231 ADGRL1O94910 1474 aa37.63■■■■□ 3.61
PHOX2A-201ENST00000298231 FRMPD1Q5SYB0 1578 aa37.6■■■■□ 3.61
PHOX2A-201ENST00000298231 RICTORQ6R327 1708 aa37.57■■■■□ 3.61
PHOX2A-201ENST00000298231 SCAPERQ9BY12 1400 aa37.56■■■■□ 3.6
PHOX2A-201ENST00000298231 RAPGEF3O95398 923 aa37.55■■■■□ 3.6
PHOX2A-201ENST00000298231 TSPY4P0CV99 314 aa37.55■■■■□ 3.6
PHOX2A-201ENST00000298231 TSPY10P0CW01 314 aa37.55■■■■□ 3.6
PHOX2A-201ENST00000298231 KIAA1107Q9UPP5 1409 aa37.55■■■■□ 3.6
PHOX2A-201ENST00000298231 SLC4A1APQ9BWU0 796 aaKnown RBP37.54■■■■□ 3.6
PHOX2A-201ENST00000298231 ABCC1P33527 1531 aa37.52■■■■□ 3.6
PHOX2A-201ENST00000298231 POGZQ7Z3K3 1410 aa37.51■■■■□ 3.6
PHOX2A-201ENST00000298231 SYCP2Q9BX26 1530 aa37.49■■■■□ 3.59
PHOX2A-201ENST00000298231 PLXNC1O60486 1568 aa37.48■■■■□ 3.59
PHOX2A-201ENST00000298231 KIF15Q9NS87 1388 aa37.48■■■■□ 3.59
PHOX2A-201ENST00000298231 ZMYM4Q5VZL5 1548 aa37.47■■■■□ 3.59
PHOX2A-201ENST00000298231 SCAF1Q9H7N4 1312 aaKnown RBP37.45■■■■□ 3.59
PHOX2A-201ENST00000298231 ARHGEF12Q9NZN5 1544 aa37.43■■■■□ 3.58
PHOX2A-201ENST00000298231 ZNF518AQ6AHZ1 1483 aa37.43■■■■□ 3.58
PHOX2A-201ENST00000298231 KDM5CP41229 1560 aa37.39■■■■□ 3.58
PHOX2A-201ENST00000298231 HNRNPMP52272 730 aaKnown RBP eCLIP37.37■■■■□ 3.57
PHOX2A-201ENST00000298231 MAGI2Q86UL8 1455 aa37.37■■■■□ 3.57
PHOX2A-201ENST00000298231 UNC13BO14795 1591 aa37.35■■■■□ 3.57
PHOX2A-201ENST00000298231 FOXD1Q16676 465 aa37.35■■■■□ 3.57
PHOX2A-201ENST00000298231 L3MBTL2Q969R5 705 aa37.35■■■■□ 3.57
PHOX2A-201ENST00000298231 TRAPPC8Q9Y2L5 1435 aa37.35■■■■□ 3.57
PHOX2A-201ENST00000298231 ARHGEF40Q8TER5 1519 aa37.33■■■■□ 3.57
PHOX2A-201ENST00000298231 AFAP1Q8N556 730 aa37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms