RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
GAPVD1-202ENST00000297933 OSCARQ8IYS5 282 aa8.91□□□□□ -0.98
GAPVD1-202ENST00000297933 NGDNQ8NEJ9 315 aaKnown RBP8.9□□□□□ -0.98
GAPVD1-202ENST00000297933 G3V3G9 751 aa8.9□□□□□ -0.98
GAPVD1-202ENST00000297933 CLSTN1O94985 981 aa8.9□□□□□ -0.98
GAPVD1-202ENST00000297933 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
GAPVD1-202ENST00000297933 SPAG9O60271 1321 aaKnown RBP8.9□□□□□ -0.98
GAPVD1-202ENST00000297933 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-202ENST00000297933 ANKRD30AQ9BXX3 1397 aa8.89□□□□□ -0.99
GAPVD1-202ENST00000297933 MIER1Q8N108 512 aa8.89□□□□□ -0.99
GAPVD1-202ENST00000297933 NBR1Q14596 966 aa8.89□□□□□ -0.99
GAPVD1-202ENST00000297933 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.996e-13■■■■■ 43.1
GAPVD1-202ENST00000297933 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-202ENST00000297933 FMN1Q68DA7 1419 aa8.87□□□□□ -0.99
GAPVD1-202ENST00000297933 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
GAPVD1-202ENST00000297933 NUP155O75694 1391 aa8.87□□□□□ -0.99
GAPVD1-202ENST00000297933 EIF3AQ14152 1382 aaKnown RBP8.87□□□□□ -0.99
GAPVD1-202ENST00000297933 JPH4Q96JJ6 628 aa8.87□□□□□ -0.99
GAPVD1-202ENST00000297933 CALD1Q05682 793 aaKnown RBP8.86□□□□□ -0.99
GAPVD1-202ENST00000297933 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
GAPVD1-202ENST00000297933 ROCK2O75116 1388 aaKnown RBP8.86□□□□□ -0.99
GAPVD1-202ENST00000297933 EVA1CP58658 441 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 TAF7LQ5H9L4 462 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 TERF2IPQ9NYB0 399 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 ANP32EQ9BTT0 268 aa8.85□□□□□ -0.99
GAPVD1-202ENST00000297933 AMPHP49418 695 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 FOXD1Q16676 465 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 MSH5O43196 834 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 RGS3P49796 1198 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 NCBP3Q53F19 620 aaKnown RBP8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 CHMP3Q9Y3E7 222 aa8.84□□□□□ -0.99
GAPVD1-202ENST00000297933 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -1
GAPVD1-202ENST00000297933 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
GAPVD1-202ENST00000297933 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
GAPVD1-202ENST00000297933 MCCP23508 829 aa8.83□□□□□ -1
GAPVD1-202ENST00000297933 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -12e-9■□□□□ 11.3
GAPVD1-202ENST00000297933 GORABQ5T7V8 394 aa8.83□□□□□ -1
GAPVD1-202ENST00000297933 LTV1Q96GA3 475 aaPredicted RBP8.83□□□□□ -1
GAPVD1-202ENST00000297933 SETD5Q9C0A6 1442 aa8.82□□□□□ -1
GAPVD1-202ENST00000297933 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
GAPVD1-202ENST00000297933 KTN1Q86UP2 1357 aaKnown RBP8.82□□□□□ -1
GAPVD1-202ENST00000297933 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
GAPVD1-202ENST00000297933 TRIM44Q96DX7 344 aaPredicted RBP8.82□□□□□ -1
GAPVD1-202ENST00000297933 IPO8O15397 1037 aaKnown RBP8.82□□□□□ -1
GAPVD1-202ENST00000297933 GNL2Q13823 731 aaKnown RBP8.82□□□□□ -1
GAPVD1-202ENST00000297933 STK31Q9BXU1 1019 aa8.82□□□□□ -1
GAPVD1-202ENST00000297933 CCDC18Q5T9S5 1454 aa8.81□□□□□ -1
GAPVD1-202ENST00000297933 PHF23Q9BUL5 403 aaPredicted RBP8.81□□□□□ -1
GAPVD1-202ENST00000297933 ABCC8Q09428 1581 aa8.81□□□□□ -1
GAPVD1-202ENST00000297933 GOLGA6L6A8MZA4 724 aa8.81□□□□□ -1
GAPVD1-202ENST00000297933 FAM69CQ0P6D2 419 aa8.81□□□□□ -1
GAPVD1-202ENST00000297933 MPHOSPH9Q99550 1183 aa8.8□□□□□ -1
GAPVD1-202ENST00000297933 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
GAPVD1-202ENST00000297933 APBB1O00213 710 aa8.8□□□□□ -1
GAPVD1-202ENST00000297933 PTPRGP23470 1445 aa8.8□□□□□ -1
GAPVD1-202ENST00000297933 GOLGA6L4A6NEF3 574 aa8.8□□□□□ -1
GAPVD1-202ENST00000297933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
GAPVD1-202ENST00000297933 RAPGEF2Q9Y4G8 1499 aa8.79□□□□□ -1
GAPVD1-202ENST00000297933 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
GAPVD1-202ENST00000297933 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
GAPVD1-202ENST00000297933 CFAP44Q96MT7 982 aa8.79□□□□□ -1
GAPVD1-202ENST00000297933 FRAT2O75474 233 aaPredicted RBP8.78□□□□□ -1
GAPVD1-202ENST00000297933 PLCB2Q00722 1185 aa8.78□□□□□ -1
GAPVD1-202ENST00000297933 HDAC5Q9UQL6 1122 aa8.78□□□□□ -1
GAPVD1-202ENST00000297933 TIMELESSQ9UNS1 1208 aa8.78□□□□□ -1
GAPVD1-202ENST00000297933 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1
GAPVD1-202ENST00000297933 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 MYO15BQ96JP2 1530 aa8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 FHOD3Q2V2M9 1422 aa8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 TRAK1Q9UPV9 953 aa8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 TOP2AP11388 1531 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 GPATCH3Q96I76 525 aa8.77□□□□□ -1.01
GAPVD1-202ENST00000297933 VPS8Q8N3P4 1428 aa8.76□□□□□ -1.01
GAPVD1-202ENST00000297933 C1orf141Q5JVX7 400 aa8.76□□□□□ -1.01
GAPVD1-202ENST00000297933 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-202ENST00000297933 KANK4Q5T7N3 995 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-202ENST00000297933 LMOD3Q0VAK6 560 aa8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 ITPRIPQ8IWB1 547 aa8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 UACAQ9BZF9 1416 aa8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 DNTTIP2Q5QJE6 756 aaKnown RBP8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 NRDCO43847 1150 aa8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 KLHL34Q8N239 644 aa8.75□□□□□ -1.01
GAPVD1-202ENST00000297933 HSCBQ8IWL3 235 aa8.74□□□□□ -1.01
GAPVD1-202ENST00000297933 ATF3P18847 181 aa8.74□□□□□ -1.01
GAPVD1-202ENST00000297933 PSME1Q06323 249 aa8.74□□□□□ -1.01
GAPVD1-202ENST00000297933 COG3Q96JB2 828 aa8.74□□□□□ -1.01
GAPVD1-202ENST00000297933 RALBP1Q15311 655 aa8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 SLC4A10Q6U841 1118 aa8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 WIZO95785 1651 aa8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 PPP4R2Q9NY27 417 aa8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 ATAD2BQ9ULI0 1458 aa8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.73□□□□□ -1.01
GAPVD1-202ENST00000297933 TTC5Q8N0Z6 440 aa8.72□□□□□ -1.01
GAPVD1-202ENST00000297933 HMMRO75330 724 aa8.71□□□□□ -1.01
GAPVD1-202ENST00000297933 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms