RNA–Protein interactions for RNA: ENST00000297819.3

SSMEM1-201, Transcript of serine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSMEM1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1-201ENST00000297819 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
SSMEM1-201ENST00000297819 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
SSMEM1-201ENST00000297819 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
SSMEM1-201ENST00000297819 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
SSMEM1-201ENST00000297819 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
SSMEM1-201ENST00000297819 PPP1R37O75864 691 aa10.58□□□□□ -0.72
SSMEM1-201ENST00000297819 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
SSMEM1-201ENST00000297819 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
SSMEM1-201ENST00000297819 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
SSMEM1-201ENST00000297819 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
SSMEM1-201ENST00000297819 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
SSMEM1-201ENST00000297819 KIF3CO14782 793 aa10.54□□□□□ -0.72
SSMEM1-201ENST00000297819 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
SSMEM1-201ENST00000297819 TMC2Q8TDI7 906 aa10.52□□□□□ -0.73
SSMEM1-201ENST00000297819 ABCC9O60706 1549 aa10.52□□□□□ -0.73
SSMEM1-201ENST00000297819 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
SSMEM1-201ENST00000297819 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
SSMEM1-201ENST00000297819 EMP3P54852 163 aa10.51□□□□□ -0.73
SSMEM1-201ENST00000297819 GTPBP6O43824 516 aaPredicted RBP10.47□□□□□ -0.73
SSMEM1-201ENST00000297819 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
SSMEM1-201ENST00000297819 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
SSMEM1-201ENST00000297819 ZCCHC6Q5VYS8 1495 aaKnown RBP10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 SLC34A2O95436 690 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SSMEM1-201ENST00000297819 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
SSMEM1-201ENST00000297819 FOXK1P85037 733 aa10.41□□□□□ -0.74
SSMEM1-201ENST00000297819 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
SSMEM1-201ENST00000297819 ERBB3P21860 1342 aa10.4□□□□□ -0.74
SSMEM1-201ENST00000297819 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
SSMEM1-201ENST00000297819 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
SSMEM1-201ENST00000297819 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
SSMEM1-201ENST00000297819 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
SSMEM1-201ENST00000297819 PDE4AP27815 886 aa10.35□□□□□ -0.75
SSMEM1-201ENST00000297819 DSG2Q14126 1118 aa10.35□□□□□ -0.75
SSMEM1-201ENST00000297819 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
SSMEM1-201ENST00000297819 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
SSMEM1-201ENST00000297819 PTCD2Q8WV60 388 aaKnown RBP10.33□□□□□ -0.76
SSMEM1-201ENST00000297819 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
SSMEM1-201ENST00000297819 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
SSMEM1-201ENST00000297819 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
SSMEM1-201ENST00000297819 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
SSMEM1-201ENST00000297819 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
SSMEM1-201ENST00000297819 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
SSMEM1-201ENST00000297819 TBC1D12O60347 775 aa10.3□□□□□ -0.76
SSMEM1-201ENST00000297819 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
SSMEM1-201ENST00000297819 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
SSMEM1-201ENST00000297819 NUDT7P0C024 238 aa10.28□□□□□ -0.76
SSMEM1-201ENST00000297819 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
SSMEM1-201ENST00000297819 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
SSMEM1-201ENST00000297819 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
SSMEM1-201ENST00000297819 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
SSMEM1-201ENST00000297819 MFSD10Q14728 455 aa10.25□□□□□ -0.77
SSMEM1-201ENST00000297819 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
SSMEM1-201ENST00000297819 NACADO15069 1562 aa10.24□□□□□ -0.77
SSMEM1-201ENST00000297819 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
SSMEM1-201ENST00000297819 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
SSMEM1-201ENST00000297819 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
SSMEM1-201ENST00000297819 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.77
SSMEM1-201ENST00000297819 RB1CC1Q8TDY2 1594 aa10.19□□□□□ -0.78
SSMEM1-201ENST00000297819 PBX2P40425 430 aa10.19□□□□□ -0.78
SSMEM1-201ENST00000297819 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
SSMEM1-201ENST00000297819 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
SSMEM1-201ENST00000297819 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
SSMEM1-201ENST00000297819 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
SSMEM1-201ENST00000297819 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
SSMEM1-201ENST00000297819 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
SSMEM1-201ENST00000297819 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
SSMEM1-201ENST00000297819 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
SSMEM1-201ENST00000297819 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
SSMEM1-201ENST00000297819 EVI5O60447 810 aa10.1□□□□□ -0.79
SSMEM1-201ENST00000297819 PTGER2P43116 358 aa10.1□□□□□ -0.79
SSMEM1-201ENST00000297819 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSMEM1-201ENST00000297819 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
SSMEM1-201ENST00000297819 HAP1P54257 671 aaPredicted RBP10.09□□□□□ -0.79
SSMEM1-201ENST00000297819 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
SSMEM1-201ENST00000297819 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
SSMEM1-201ENST00000297819 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
SSMEM1-201ENST00000297819 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
SSMEM1-201ENST00000297819 FOSBP53539 338 aa10.05□□□□□ -0.8
SSMEM1-201ENST00000297819 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
SSMEM1-201ENST00000297819 JPH4Q96JJ6 628 aa10.05□□□□□ -0.8
SSMEM1-201ENST00000297819 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
SSMEM1-201ENST00000297819 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
SSMEM1-201ENST00000297819 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
SSMEM1-201ENST00000297819 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
SSMEM1-201ENST00000297819 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
SSMEM1-201ENST00000297819 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
SSMEM1-201ENST00000297819 TK2O00142 265 aa10.02□□□□□ -0.81
SSMEM1-201ENST00000297819 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.81
SSMEM1-201ENST00000297819 SHROOM4Q9ULL8 1493 aa10□□□□□ -0.81
SSMEM1-201ENST00000297819 PSEN2P49810 448 aa10□□□□□ -0.81
SSMEM1-201ENST00000297819 DPYSL4O14531 572 aa9.99□□□□□ -0.81
SSMEM1-201ENST00000297819 E2F4Q16254 413 aa9.99□□□□□ -0.81
SSMEM1-201ENST00000297819 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
SSMEM1-201ENST00000297819 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
SSMEM1-201ENST00000297819 PTPREP23469 700 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms