RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 MPHOSPH9Q99550 1183 aa18.1■□□□□ 0.49
COL1A2-201ENST00000297268 PKD2Q13563 968 aa18.1■□□□□ 0.49
COL1A2-201ENST00000297268 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
COL1A2-201ENST00000297268 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
COL1A2-201ENST00000297268 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
COL1A2-201ENST00000297268 CHAF1AQ13111 956 aaPredicted RBP18.08■□□□□ 0.48
COL1A2-201ENST00000297268 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
COL1A2-201ENST00000297268 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
COL1A2-201ENST00000297268 POGKQ9P215 609 aa18.06■□□□□ 0.48
COL1A2-201ENST00000297268 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
COL1A2-201ENST00000297268 GOLGA6L3A6NEY3 463 aa18.05■□□□□ 0.48
COL1A2-201ENST00000297268 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
COL1A2-201ENST00000297268 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
COL1A2-201ENST00000297268 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
COL1A2-201ENST00000297268 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
COL1A2-201ENST00000297268 PTMSP20962 102 aa18.03■□□□□ 0.48
COL1A2-201ENST00000297268 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
COL1A2-201ENST00000297268 ROCK2O75116 1388 aaKnown RBP18.02■□□□□ 0.48
COL1A2-201ENST00000297268 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
COL1A2-201ENST00000297268 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
COL1A2-201ENST00000297268 OS9Q13438 667 aaPredicted RBP18.01■□□□□ 0.47
COL1A2-201ENST00000297268 KCNJ4P48050 445 aa18.01■□□□□ 0.47
COL1A2-201ENST00000297268 MCCP23508 829 aa18.01■□□□□ 0.47
COL1A2-201ENST00000297268 CFAP44Q96MT7 982 aa18■□□□□ 0.47
COL1A2-201ENST00000297268 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
COL1A2-201ENST00000297268 FGD1P98174 961 aa17.99■□□□□ 0.47
COL1A2-201ENST00000297268 NRDCO43847 1150 aa17.98■□□□□ 0.47
COL1A2-201ENST00000297268 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
COL1A2-201ENST00000297268 PMFBP1Q8TBY8 1022 aa17.98■□□□□ 0.47
COL1A2-201ENST00000297268 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
COL1A2-201ENST00000297268 PDE4AP27815 886 aa17.97■□□□□ 0.47
COL1A2-201ENST00000297268 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
COL1A2-201ENST00000297268 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
COL1A2-201ENST00000297268 NLRP13Q86W25 1043 aa17.96■□□□□ 0.47
COL1A2-201ENST00000297268 DRC7Q8IY82 874 aa17.96■□□□□ 0.47
COL1A2-201ENST00000297268 ARID3AQ99856 593 aa17.96■□□□□ 0.47
COL1A2-201ENST00000297268 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.46
COL1A2-201ENST00000297268 A0A0G2JS52 829 aa17.94■□□□□ 0.46
COL1A2-201ENST00000297268 APBB1O00213 710 aa17.93■□□□□ 0.46
COL1A2-201ENST00000297268 GSE1Q14687 1217 aa17.93■□□□□ 0.46
COL1A2-201ENST00000297268 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
COL1A2-201ENST00000297268 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
COL1A2-201ENST00000297268 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
COL1A2-201ENST00000297268 NAP1L2Q9ULW6 460 aaPredicted RBP17.93■□□□□ 0.46
COL1A2-201ENST00000297268 SLC4A3P48751 1232 aa17.92■□□□□ 0.46
COL1A2-201ENST00000297268 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
COL1A2-201ENST00000297268 NUP155O75694 1391 aa17.92■□□□□ 0.46
COL1A2-201ENST00000297268 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
COL1A2-201ENST00000297268 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL1A2-201ENST00000297268 RAPGEF2Q9Y4G8 1499 aa17.91■□□□□ 0.46
COL1A2-201ENST00000297268 KANK1Q14678 1352 aa17.91■□□□□ 0.46
COL1A2-201ENST00000297268 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
COL1A2-201ENST00000297268 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
COL1A2-201ENST00000297268 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
COL1A2-201ENST00000297268 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL1A2-201ENST00000297268 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
COL1A2-201ENST00000297268 KIF15Q9NS87 1388 aa17.88■□□□□ 0.45
COL1A2-201ENST00000297268 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
COL1A2-201ENST00000297268 CLUAP1Q96AJ1 413 aa17.88■□□□□ 0.45
COL1A2-201ENST00000297268 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
COL1A2-201ENST00000297268 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
COL1A2-201ENST00000297268 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
COL1A2-201ENST00000297268 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
COL1A2-201ENST00000297268 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
COL1A2-201ENST00000297268 WIZO95785 1651 aa17.86■□□□□ 0.45
COL1A2-201ENST00000297268 PLIN1O60240 522 aa17.86■□□□□ 0.45
COL1A2-201ENST00000297268 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
COL1A2-201ENST00000297268 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
COL1A2-201ENST00000297268 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
COL1A2-201ENST00000297268 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
COL1A2-201ENST00000297268 ANKRD30AQ9BXX3 1397 aa17.85■□□□□ 0.45
COL1A2-201ENST00000297268 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
COL1A2-201ENST00000297268 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
COL1A2-201ENST00000297268 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
COL1A2-201ENST00000297268 HSP90AA2PQ14568 343 aaPredicted RBP17.84■□□□□ 0.45
COL1A2-201ENST00000297268 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
COL1A2-201ENST00000297268 CRBNQ96SW2 442 aa17.82■□□□□ 0.44
COL1A2-201ENST00000297268 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
COL1A2-201ENST00000297268 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
COL1A2-201ENST00000297268 KIAA1211Q6ZU35 1233 aa17.82■□□□□ 0.44
COL1A2-201ENST00000297268 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
COL1A2-201ENST00000297268 SOX12O15370 315 aa17.81■□□□□ 0.44
COL1A2-201ENST00000297268 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
COL1A2-201ENST00000297268 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-201ENST00000297268 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
COL1A2-201ENST00000297268 STK26Q9P289 416 aa17.78■□□□□ 0.44
COL1A2-201ENST00000297268 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
COL1A2-201ENST00000297268 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
COL1A2-201ENST00000297268 PANK3Q9H999 370 aa17.75■□□□□ 0.43
COL1A2-201ENST00000297268 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
COL1A2-201ENST00000297268 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
COL1A2-201ENST00000297268 NOL8Q76FK4 1167 aaKnown RBP17.72■□□□□ 0.43
COL1A2-201ENST00000297268 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
COL1A2-201ENST00000297268 USP47Q96K76 1375 aa17.71■□□□□ 0.43
COL1A2-201ENST00000297268 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
COL1A2-201ENST00000297268 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
COL1A2-201ENST00000297268 ST18O60284 1047 aa17.7■□□□□ 0.42
COL1A2-201ENST00000297268 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
COL1A2-201ENST00000297268 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
COL1A2-201ENST00000297268 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms