RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
UBLCP1-201ENST00000296786 KIF14Q15058 1648 aa13.23□□□□□ -0.29
UBLCP1-201ENST00000296786 NUP160Q12769 1436 aa13.22□□□□□ -0.29
UBLCP1-201ENST00000296786 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
UBLCP1-201ENST00000296786 ABCC5O15440 1437 aa13.21□□□□□ -0.29
UBLCP1-201ENST00000296786 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.29
UBLCP1-201ENST00000296786 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
UBLCP1-201ENST00000296786 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.29
UBLCP1-201ENST00000296786 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
UBLCP1-201ENST00000296786 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
UBLCP1-201ENST00000296786 CARMIL2Q6F5E8 1435 aa13.2□□□□□ -0.3
UBLCP1-201ENST00000296786 MPHOSPH9Q99550 1183 aa13.19□□□□□ -0.3
UBLCP1-201ENST00000296786 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
UBLCP1-201ENST00000296786 CDC42BPAQ5VT25 1732 aa13.18□□□□□ -0.3
UBLCP1-201ENST00000296786 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
UBLCP1-201ENST00000296786 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
UBLCP1-201ENST00000296786 ABCA8O94911 1581 aa13.16□□□□□ -0.3
UBLCP1-201ENST00000296786 FOXD1Q16676 465 aa13.15□□□□□ -0.3
UBLCP1-201ENST00000296786 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
UBLCP1-201ENST00000296786 ANP32CO43423 234 aa13.13□□□□□ -0.31
UBLCP1-201ENST00000296786 RPRD2Q5VT52 1461 aaKnown RBP13.12□□□□□ -0.31
UBLCP1-201ENST00000296786 CHD1O14646 1710 aa13.12□□□□□ -0.31
UBLCP1-201ENST00000296786 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
UBLCP1-201ENST00000296786 NCOA1Q15788 1441 aa13.11□□□□□ -0.31
UBLCP1-201ENST00000296786 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 ATP10BO94823 1461 aa13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
UBLCP1-201ENST00000296786 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 PZPP20742 1482 aa13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 ABCC10Q5T3U5 1492 aa13.09□□□□□ -0.31
UBLCP1-201ENST00000296786 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
UBLCP1-201ENST00000296786 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBLCP1-201ENST00000296786 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
UBLCP1-201ENST00000296786 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
UBLCP1-201ENST00000296786 ANKRD30AQ9BXX3 1397 aa13.05□□□□□ -0.32
UBLCP1-201ENST00000296786 SHANK2Q9UPX8 1470 aa13.04□□□□□ -0.32
UBLCP1-201ENST00000296786 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
UBLCP1-201ENST00000296786 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.32
UBLCP1-201ENST00000296786 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.32
UBLCP1-201ENST00000296786 PTPRGP23470 1445 aa13.02□□□□□ -0.33
UBLCP1-201ENST00000296786 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
UBLCP1-201ENST00000296786 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
UBLCP1-201ENST00000296786 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
UBLCP1-201ENST00000296786 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
UBLCP1-201ENST00000296786 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
UBLCP1-201ENST00000296786 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
UBLCP1-201ENST00000296786 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
UBLCP1-201ENST00000296786 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
UBLCP1-201ENST00000296786 CCDC7Q96M83 1385 aa12.98□□□□□ -0.33
UBLCP1-201ENST00000296786 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
UBLCP1-201ENST00000296786 PKD2Q13563 968 aa12.98□□□□□ -0.33
UBLCP1-201ENST00000296786 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
UBLCP1-201ENST00000296786 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
UBLCP1-201ENST00000296786 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.33
UBLCP1-201ENST00000296786 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
UBLCP1-201ENST00000296786 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
UBLCP1-201ENST00000296786 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
UBLCP1-201ENST00000296786 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBLCP1-201ENST00000296786 NUP155O75694 1391 aa12.95□□□□□ -0.34
UBLCP1-201ENST00000296786 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
UBLCP1-201ENST00000296786 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
UBLCP1-201ENST00000296786 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
UBLCP1-201ENST00000296786 BCORL1Q5H9F3 1711 aa12.94□□□□□ -0.34
UBLCP1-201ENST00000296786 KDM5CP41229 1560 aa12.93□□□□□ -0.34
UBLCP1-201ENST00000296786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBLCP1-201ENST00000296786 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
UBLCP1-201ENST00000296786 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
UBLCP1-201ENST00000296786 ABCC2Q92887 1545 aa12.92□□□□□ -0.34
UBLCP1-201ENST00000296786 FKBP8Q14318 412 aa12.91□□□□□ -0.34
UBLCP1-201ENST00000296786 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
UBLCP1-201ENST00000296786 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
UBLCP1-201ENST00000296786 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
UBLCP1-201ENST00000296786 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.34
UBLCP1-201ENST00000296786 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
UBLCP1-201ENST00000296786 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBLCP1-201ENST00000296786 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
UBLCP1-201ENST00000296786 USP47Q96K76 1375 aa12.89□□□□□ -0.35
UBLCP1-201ENST00000296786 BCANQ96GW7 911 aa12.88□□□□□ -0.35
UBLCP1-201ENST00000296786 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
UBLCP1-201ENST00000296786 UNC13BO14795 1591 aa12.88□□□□□ -0.35
UBLCP1-201ENST00000296786 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
UBLCP1-201ENST00000296786 RALGAPBQ86X10 1494 aa12.87□□□□□ -0.35
UBLCP1-201ENST00000296786 PLXNC1O60486 1568 aa12.87□□□□□ -0.35
UBLCP1-201ENST00000296786 NEFLP07196 543 aa12.87□□□□□ -0.35
UBLCP1-201ENST00000296786 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
UBLCP1-201ENST00000296786 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
UBLCP1-201ENST00000296786 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
UBLCP1-201ENST00000296786 IQGAP3Q86VI3 1631 aa12.83□□□□□ -0.35
UBLCP1-201ENST00000296786 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
UBLCP1-201ENST00000296786 MRS2Q9HD23 443 aa12.82□□□□□ -0.36
UBLCP1-201ENST00000296786 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
UBLCP1-201ENST00000296786 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
UBLCP1-201ENST00000296786 FAM9BQ8IZU0 186 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms