RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
PLXNB1-201ENST00000296440 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
PLXNB1-201ENST00000296440 MARCH6O60337 910 aa16.92■□□□□ 0.3
PLXNB1-201ENST00000296440 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
PLXNB1-201ENST00000296440 FOXD1Q16676 465 aa16.91■□□□□ 0.3
PLXNB1-201ENST00000296440 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
PLXNB1-201ENST00000296440 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
PLXNB1-201ENST00000296440 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
PLXNB1-201ENST00000296440 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
PLXNB1-201ENST00000296440 FBXW7Q969H0 707 aa16.89■□□□□ 0.29
PLXNB1-201ENST00000296440 RAD21O60216 631 aa16.88■□□□□ 0.29
PLXNB1-201ENST00000296440 MCCP23508 829 aa16.88■□□□□ 0.29
PLXNB1-201ENST00000296440 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
PLXNB1-201ENST00000296440 RASSF8Q8NHQ8 419 aa16.87■□□□□ 0.29
PLXNB1-201ENST00000296440 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
PLXNB1-201ENST00000296440 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
PLXNB1-201ENST00000296440 CEP89Q96ST8 783 aa16.85■□□□□ 0.29
PLXNB1-201ENST00000296440 DRC7Q8IY82 874 aa16.85■□□□□ 0.29
PLXNB1-201ENST00000296440 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
PLXNB1-201ENST00000296440 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
PLXNB1-201ENST00000296440 APBB1O00213 710 aa16.84■□□□□ 0.29
PLXNB1-201ENST00000296440 MS4A1P11836 297 aa16.84■□□□□ 0.29
PLXNB1-201ENST00000296440 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
PLXNB1-201ENST00000296440 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
PLXNB1-201ENST00000296440 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
PLXNB1-201ENST00000296440 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
PLXNB1-201ENST00000296440 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
PLXNB1-201ENST00000296440 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
PLXNB1-201ENST00000296440 CREBRFQ8IUR6 639 aa16.79■□□□□ 0.28
PLXNB1-201ENST00000296440 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
PLXNB1-201ENST00000296440 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
PLXNB1-201ENST00000296440 HSP90B1P14625 803 aaKnown RBP16.76■□□□□ 0.27
PLXNB1-201ENST00000296440 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
PLXNB1-201ENST00000296440 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
PLXNB1-201ENST00000296440 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
PLXNB1-201ENST00000296440 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
PLXNB1-201ENST00000296440 RGS3P49796 1198 aa16.74■□□□□ 0.27
PLXNB1-201ENST00000296440 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
PLXNB1-201ENST00000296440 AMPHP49418 695 aa16.74■□□□□ 0.27
PLXNB1-201ENST00000296440 TMF1P82094 1093 aa16.74■□□□□ 0.27
PLXNB1-201ENST00000296440 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
PLXNB1-201ENST00000296440 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
PLXNB1-201ENST00000296440 CHMP4AQ9BY43 222 aa16.71■□□□□ 0.27
PLXNB1-201ENST00000296440 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
PLXNB1-201ENST00000296440 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
PLXNB1-201ENST00000296440 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
PLXNB1-201ENST00000296440 CLIP1P30622 1438 aa16.69■□□□□ 0.26
PLXNB1-201ENST00000296440 CCDC34Q96HJ3 373 aa16.69■□□□□ 0.26
PLXNB1-201ENST00000296440 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
PLXNB1-201ENST00000296440 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
PLXNB1-201ENST00000296440 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
PLXNB1-201ENST00000296440 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
PLXNB1-201ENST00000296440 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
PLXNB1-201ENST00000296440 C1orf141Q5JVX7 400 aa16.63■□□□□ 0.25
PLXNB1-201ENST00000296440 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
PLXNB1-201ENST00000296440 TPM4P67936 248 aa16.63■□□□□ 0.25
PLXNB1-201ENST00000296440 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
PLXNB1-201ENST00000296440 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
PLXNB1-201ENST00000296440 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
PLXNB1-201ENST00000296440 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 PES1O00541 588 aaKnown RBP16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 CFAP44Q96MT7 982 aa16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
PLXNB1-201ENST00000296440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■■ 115.4
PLXNB1-201ENST00000296440 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
PLXNB1-201ENST00000296440 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
PLXNB1-201ENST00000296440 PAF1Q8N7H5 531 aa16.58■□□□□ 0.24
PLXNB1-201ENST00000296440 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
PLXNB1-201ENST00000296440 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
PLXNB1-201ENST00000296440 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
PLXNB1-201ENST00000296440 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
PLXNB1-201ENST00000296440 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
PLXNB1-201ENST00000296440 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
PLXNB1-201ENST00000296440 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
PLXNB1-201ENST00000296440 ATF3P18847 181 aa16.56■□□□□ 0.24
PLXNB1-201ENST00000296440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.24
PLXNB1-201ENST00000296440 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
PLXNB1-201ENST00000296440 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
PLXNB1-201ENST00000296440 TPD52L1Q16890 204 aaPredicted RBP16.54■□□□□ 0.24
PLXNB1-201ENST00000296440 PSME1Q06323 249 aa16.53■□□□□ 0.24
PLXNB1-201ENST00000296440 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
PLXNB1-201ENST00000296440 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.23
PLXNB1-201ENST00000296440 KIF3BO15066 747 aa16.52■□□□□ 0.23
PLXNB1-201ENST00000296440 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
PLXNB1-201ENST00000296440 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
PLXNB1-201ENST00000296440 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
PLXNB1-201ENST00000296440 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
PLXNB1-201ENST00000296440 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PLXNB1-201ENST00000296440 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
PLXNB1-201ENST00000296440 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
PLXNB1-201ENST00000296440 B4GALNT3Q6L9W6 998 aa16.49■□□□□ 0.23
PLXNB1-201ENST00000296440 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
PLXNB1-201ENST00000296440 TPM2P07951 284 aa16.48■□□□□ 0.23
PLXNB1-201ENST00000296440 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
PLXNB1-201ENST00000296440 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
PLXNB1-201ENST00000296440 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
PLXNB1-201ENST00000296440 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms