RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
PBRM1-201ENST00000296302 KCNH8Q96L42 1107 aa14□□□□□ -0.17
PBRM1-201ENST00000296302 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
PBRM1-201ENST00000296302 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
PBRM1-201ENST00000296302 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
PBRM1-201ENST00000296302 CARMIL1Q5VZK9 1371 aa13.98□□□□□ -0.17
PBRM1-201ENST00000296302 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
PBRM1-201ENST00000296302 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
PBRM1-201ENST00000296302 PMFBP1Q8TBY8 1022 aa13.97□□□□□ -0.17
PBRM1-201ENST00000296302 KCNJ4P48050 445 aa13.97□□□□□ -0.17
PBRM1-201ENST00000296302 FGD1P98174 961 aa13.96□□□□□ -0.17
PBRM1-201ENST00000296302 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
PBRM1-201ENST00000296302 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
PBRM1-201ENST00000296302 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
PBRM1-201ENST00000296302 OS9Q13438 667 aaPredicted RBP13.94□□□□□ -0.18
PBRM1-201ENST00000296302 POGKQ9P215 609 aa13.94□□□□□ -0.18
PBRM1-201ENST00000296302 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
PBRM1-201ENST00000296302 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
PBRM1-201ENST00000296302 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
PBRM1-201ENST00000296302 GSE1Q14687 1217 aa13.93□□□□□ -0.18
PBRM1-201ENST00000296302 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
PBRM1-201ENST00000296302 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
PBRM1-201ENST00000296302 PKD2Q13563 968 aa13.92□□□□□ -0.18
PBRM1-201ENST00000296302 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
PBRM1-201ENST00000296302 NLRP13Q86W25 1043 aa13.92□□□□□ -0.18
PBRM1-201ENST00000296302 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
PBRM1-201ENST00000296302 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
PBRM1-201ENST00000296302 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
PBRM1-201ENST00000296302 PDE4AP27815 886 aa13.9□□□□□ -0.18
PBRM1-201ENST00000296302 HSP90AA2PQ14568 343 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-201ENST00000296302 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-201ENST00000296302 CUX2O14529 1486 aa13.9□□□□□ -0.18
PBRM1-201ENST00000296302 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
PBRM1-201ENST00000296302 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
PBRM1-201ENST00000296302 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
PBRM1-201ENST00000296302 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
PBRM1-201ENST00000296302 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
PBRM1-201ENST00000296302 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
PBRM1-201ENST00000296302 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
PBRM1-201ENST00000296302 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
PBRM1-201ENST00000296302 FOXD1Q16676 465 aa13.87□□□□□ -0.19
PBRM1-201ENST00000296302 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
PBRM1-201ENST00000296302 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
PBRM1-201ENST00000296302 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
PBRM1-201ENST00000296302 KANK1Q14678 1352 aa13.86□□□□□ -0.19
PBRM1-201ENST00000296302 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
PBRM1-201ENST00000296302 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
PBRM1-201ENST00000296302 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
PBRM1-201ENST00000296302 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
PBRM1-201ENST00000296302 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-201ENST00000296302 PRKRIP1Q9H875 184 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-201ENST00000296302 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
PBRM1-201ENST00000296302 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
PBRM1-201ENST00000296302 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.2
PBRM1-201ENST00000296302 RRP1P56182 461 aaKnown RBP13.82□□□□□ -0.2
PBRM1-201ENST00000296302 ARID3AQ99856 593 aa13.82□□□□□ -0.2
PBRM1-201ENST00000296302 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
PBRM1-201ENST00000296302 SRPK2P78362 688 aaKnown RBP13.81□□□□□ -0.2
PBRM1-201ENST00000296302 PHF14O94880 888 aa13.8□□□□□ -0.2
PBRM1-201ENST00000296302 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
PBRM1-201ENST00000296302 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
PBRM1-201ENST00000296302 NUP155O75694 1391 aa13.8□□□□□ -0.2
PBRM1-201ENST00000296302 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
PBRM1-201ENST00000296302 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
PBRM1-201ENST00000296302 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
PBRM1-201ENST00000296302 EIF4G1Q04637 1599 aaKnown RBP13.78□□□□□ -0.2
PBRM1-201ENST00000296302 APBB1O00213 710 aa13.78□□□□□ -0.2
PBRM1-201ENST00000296302 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
PBRM1-201ENST00000296302 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-201ENST00000296302 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-201ENST00000296302 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
PBRM1-201ENST00000296302 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
PBRM1-201ENST00000296302 A0A0G2JS52 829 aa13.77□□□□□ -0.2
PBRM1-201ENST00000296302 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
PBRM1-201ENST00000296302 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
PBRM1-201ENST00000296302 ST18O60284 1047 aa13.77□□□□□ -0.21
PBRM1-201ENST00000296302 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
PBRM1-201ENST00000296302 HMMRO75330 724 aa13.76□□□□□ -0.21
PBRM1-201ENST00000296302 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
PBRM1-201ENST00000296302 TPM4P67936 248 aa13.76□□□□□ -0.21
PBRM1-201ENST00000296302 CLUAP1Q96AJ1 413 aa13.75□□□□□ -0.21
PBRM1-201ENST00000296302 CGNL1Q0VF96 1302 aa13.75□□□□□ -0.21
PBRM1-201ENST00000296302 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
PBRM1-201ENST00000296302 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
PBRM1-201ENST00000296302 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
PBRM1-201ENST00000296302 CCDC146Q8IYE0 955 aa13.72□□□□□ -0.21
PBRM1-201ENST00000296302 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
PBRM1-201ENST00000296302 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
PBRM1-201ENST00000296302 E9PSI1 815 aa13.71□□□□□ -0.21
PBRM1-201ENST00000296302 PLIN1O60240 522 aa13.7□□□□□ -0.22
PBRM1-201ENST00000296302 CHMP5Q9NZZ3 219 aa13.7□□□□□ -0.22
PBRM1-201ENST00000296302 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
PBRM1-201ENST00000296302 HDGFP51858 240 aaKnown RBP13.69□□□□□ -0.22
PBRM1-201ENST00000296302 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
PBRM1-201ENST00000296302 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
PBRM1-201ENST00000296302 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
PBRM1-201ENST00000296302 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
PBRM1-201ENST00000296302 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
PBRM1-201ENST00000296302 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
PBRM1-201ENST00000296302 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms