RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 HECW1Q76N89 1606 aa27.01■■□□□ 1.91
UBXN1-201ENST00000294119 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
UBXN1-201ENST00000294119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.97■■□□□ 1.91
UBXN1-201ENST00000294119 MLECQ14165 292 aa26.97■■□□□ 1.91
UBXN1-201ENST00000294119 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
UBXN1-201ENST00000294119 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.9
UBXN1-201ENST00000294119 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
UBXN1-201ENST00000294119 CEBPAP49715 358 aaPredicted RBP26.92■■□□□ 1.9
UBXN1-201ENST00000294119 ATP10AO60312 1499 aa26.91■■□□□ 1.9
UBXN1-201ENST00000294119 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
UBXN1-201ENST00000294119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
UBXN1-201ENST00000294119 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
UBXN1-201ENST00000294119 PLEKHD1A6NEE1 506 aa26.84■■□□□ 1.89
UBXN1-201ENST00000294119 SCAPERQ9BY12 1400 aa26.83■■□□□ 1.89
UBXN1-201ENST00000294119 PLCH2O75038 1416 aa26.78■■□□□ 1.88
UBXN1-201ENST00000294119 NCOA1Q15788 1441 aa26.77■■□□□ 1.88
UBXN1-201ENST00000294119 C3P01024 1663 aa26.76■■□□□ 1.87
UBXN1-201ENST00000294119 REREQ9P2R6 1566 aa26.72■■□□□ 1.87
UBXN1-201ENST00000294119 KDM5CP41229 1560 aa26.7■■□□□ 1.86
UBXN1-201ENST00000294119 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
UBXN1-201ENST00000294119 ZNF518AQ6AHZ1 1483 aa26.66■■□□□ 1.86
UBXN1-201ENST00000294119 DIP2CQ9Y2E4 1556 aa26.66■■□□□ 1.86
UBXN1-201ENST00000294119 AGLP35573 1532 aa26.62■■□□□ 1.85
UBXN1-201ENST00000294119 MED1Q15648 1581 aaPredicted RBP26.61■■□□□ 1.85
UBXN1-201ENST00000294119 UBAP1LF5GYI3 381 aa26.6■■□□□ 1.85
UBXN1-201ENST00000294119 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
UBXN1-201ENST00000294119 CAMSAP1Q5T5Y3 1602 aa26.59■■□□□ 1.85
UBXN1-201ENST00000294119 CDK13Q14004 1512 aaKnown RBP26.59■■□□□ 1.85
UBXN1-201ENST00000294119 EFCAB2Q5VUJ9 269 aa26.58■■□□□ 1.85
UBXN1-201ENST00000294119 ZNF335Q9H4Z2 1342 aaPredicted RBP26.57■■□□□ 1.84
UBXN1-201ENST00000294119 ABCA6Q8N139 1617 aa26.57■■□□□ 1.84
UBXN1-201ENST00000294119 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
UBXN1-201ENST00000294119 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
UBXN1-201ENST00000294119 NPATQ14207 1427 aa26.52■■□□□ 1.84
UBXN1-201ENST00000294119 CNTLNQ9NXG0 1405 aa26.52■■□□□ 1.84
UBXN1-201ENST00000294119 PLA2R1Q13018 1463 aa26.49■■□□□ 1.83
UBXN1-201ENST00000294119 TCOF1Q13428 1488 aaKnown RBP26.47■■□□□ 1.83
UBXN1-201ENST00000294119 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
UBXN1-201ENST00000294119 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
UBXN1-201ENST00000294119 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.83
UBXN1-201ENST00000294119 KIF14Q15058 1648 aa26.45■■□□□ 1.82
UBXN1-201ENST00000294119 HSPA1LP34931 641 aa26.44■■□□□ 1.82
UBXN1-201ENST00000294119 ZNF142P52746 1687 aaPredicted RBP26.44■■□□□ 1.82
UBXN1-201ENST00000294119 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
UBXN1-201ENST00000294119 PKD2Q13563 968 aa26.41■■□□□ 1.82
UBXN1-201ENST00000294119 ESF1Q9H501 851 aaKnown RBP26.4■■□□□ 1.82
UBXN1-201ENST00000294119 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
UBXN1-201ENST00000294119 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
UBXN1-201ENST00000294119 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
UBXN1-201ENST00000294119 CDC42BPBQ9Y5S2 1711 aa26.36■■□□□ 1.81
UBXN1-201ENST00000294119 ZMYM3Q14202 1370 aa26.35■■□□□ 1.81
UBXN1-201ENST00000294119 ABCC1P33527 1531 aa26.35■■□□□ 1.81
UBXN1-201ENST00000294119 CEP170BQ9Y4F5 1589 aaPredicted RBP26.34■■□□□ 1.81
UBXN1-201ENST00000294119 TROQ12816 1431 aaPredicted RBP26.33■■□□□ 1.81
UBXN1-201ENST00000294119 ITSN2Q9NZM3 1697 aa26.31■■□□□ 1.8
UBXN1-201ENST00000294119 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
UBXN1-201ENST00000294119 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
UBXN1-201ENST00000294119 PTPRKQ15262 1439 aa26.28■■□□□ 1.8
UBXN1-201ENST00000294119 CPS1P31327 1500 aa26.28■■□□□ 1.8
UBXN1-201ENST00000294119 ALKQ9UM73 1620 aa26.28■■□□□ 1.8
UBXN1-201ENST00000294119 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
UBXN1-201ENST00000294119 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
UBXN1-201ENST00000294119 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
UBXN1-201ENST00000294119 TOM1O60784 492 aa26.25■■□□□ 1.79
UBXN1-201ENST00000294119 PIP4K2BP78356 416 aa26.24■■□□□ 1.79
UBXN1-201ENST00000294119 FMN1Q68DA7 1419 aa26.22■■□□□ 1.79
UBXN1-201ENST00000294119 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
UBXN1-201ENST00000294119 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
UBXN1-201ENST00000294119 CLIP1P30622 1438 aa26.21■■□□□ 1.79
UBXN1-201ENST00000294119 EEA1Q15075 1411 aa26.21■■□□□ 1.79
UBXN1-201ENST00000294119 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.79
UBXN1-201ENST00000294119 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
UBXN1-201ENST00000294119 NEURL4Q96JN8 1562 aa26.2■■□□□ 1.78
UBXN1-201ENST00000294119 SHANK2Q9UPX8 1470 aa26.19■■□□□ 1.78
UBXN1-201ENST00000294119 PLXNC1O60486 1568 aa26.19■■□□□ 1.78
UBXN1-201ENST00000294119 DNMT1P26358 1616 aaKnown RBP26.17■■□□□ 1.78
UBXN1-201ENST00000294119 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
UBXN1-201ENST00000294119 A2ML1A8K2U0 1454 aa26.16■■□□□ 1.78
UBXN1-201ENST00000294119 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.77
UBXN1-201ENST00000294119 VWDEQ8N2E2 1590 aa26.12■■□□□ 1.77
UBXN1-201ENST00000294119 RGS17Q9UGC6 210 aaPredicted RBP26.11■■□□□ 1.77
UBXN1-201ENST00000294119 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
UBXN1-201ENST00000294119 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
UBXN1-201ENST00000294119 ATP1B4Q9UN42 357 aaPredicted RBP26.09■■□□□ 1.77
UBXN1-201ENST00000294119 INO80Q9ULG1 1556 aaPredicted RBP26.05■■□□□ 1.76
UBXN1-201ENST00000294119 A2MP01023 1474 aa26.04■■□□□ 1.76
UBXN1-201ENST00000294119 ATP7AQ04656 1500 aa26.04■■□□□ 1.76
UBXN1-201ENST00000294119 SYCP2Q9BX26 1530 aa26.03■■□□□ 1.76
UBXN1-201ENST00000294119 SPAG9O60271 1321 aaKnown RBP26.02■■□□□ 1.76
UBXN1-201ENST00000294119 MED14O60244 1454 aa26■■□□□ 1.75
UBXN1-201ENST00000294119 DEPDC5O75140 1603 aa25.96■■□□□ 1.75
UBXN1-201ENST00000294119 KIAA1107Q9UPP5 1409 aa25.96■■□□□ 1.75
UBXN1-201ENST00000294119 RNF17Q9BXT8 1623 aaKnown RBP25.95■■□□□ 1.74
UBXN1-201ENST00000294119 STRCP1A6NGW2 1772 aa25.95■■□□□ 1.74
UBXN1-201ENST00000294119 GGT6Q6P531 493 aa25.94■■□□□ 1.74
UBXN1-201ENST00000294119 LRRC7Q96NW7 1537 aa25.93■■□□□ 1.74
UBXN1-201ENST00000294119 CCDC18Q5T9S5 1454 aa25.92■■□□□ 1.74
UBXN1-201ENST00000294119 GPATCH8Q9UKJ3 1502 aaKnown RBP25.92■■□□□ 1.74
UBXN1-201ENST00000294119 TNRQ92752 1358 aa25.92■■□□□ 1.74
UBXN1-201ENST00000294119 SYNMO15061 1565 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms