RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 DAPK1P53355 1430 aa26.47■■□□□ 1.83
LSM12-201ENST00000293406 RPRD2Q5VT52 1461 aaKnown RBP26.47■■□□□ 1.83
LSM12-201ENST00000293406 ANKRD30BQ9BXX2 1392 aa26.47■■□□□ 1.83
LSM12-201ENST00000293406 CCDC184Q52MB2 194 aa26.47■■□□□ 1.83
LSM12-201ENST00000293406 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
LSM12-201ENST00000293406 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
LSM12-201ENST00000293406 ERICH6BQ5W0A0 696 aa26.43■■□□□ 1.82
LSM12-201ENST00000293406 CDK11AQ9UQ88 783 aaPredicted RBP26.43■■□□□ 1.82
LSM12-201ENST00000293406 NBPF8Q3BBV2 869 aa26.42■■□□□ 1.82
LSM12-201ENST00000293406 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
LSM12-201ENST00000293406 ABCC5O15440 1437 aa26.41■■□□□ 1.82
LSM12-201ENST00000293406 DNMT1P26358 1616 aaKnown RBP26.41■■□□□ 1.82
LSM12-201ENST00000293406 MRS2Q9HD23 443 aa26.39■■□□□ 1.82
LSM12-201ENST00000293406 FAM9BQ8IZU0 186 aa26.39■■□□□ 1.81
LSM12-201ENST00000293406 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
LSM12-201ENST00000293406 ZNF644Q9H582 1327 aaPredicted RBP26.36■■□□□ 1.81
LSM12-201ENST00000293406 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
LSM12-201ENST00000293406 PPP4R2Q9NY27 417 aa26.34■■□□□ 1.81
LSM12-201ENST00000293406 KIF7Q2M1P5 1343 aa26.34■■□□□ 1.81
LSM12-201ENST00000293406 ZBED9Q6R2W3 1325 aa26.34■■□□□ 1.81
LSM12-201ENST00000293406 KIAA0556O60303 1618 aa26.32■■□□□ 1.8
LSM12-201ENST00000293406 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
LSM12-201ENST00000293406 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
LSM12-201ENST00000293406 FANCIQ9NVI1 1328 aa26.31■■□□□ 1.8
LSM12-201ENST00000293406 DISP1Q96F81 1524 aa26.3■■□□□ 1.8
LSM12-201ENST00000293406 MSH5O43196 834 aa26.3■■□□□ 1.8
LSM12-201ENST00000293406 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
LSM12-201ENST00000293406 POLR1AO95602 1720 aaPredicted RBP26.29■■□□□ 1.8
LSM12-201ENST00000293406 RAPGEF6Q8TEU7 1601 aa26.27■■□□□ 1.8
LSM12-201ENST00000293406 PZPP20742 1482 aa26.24■■□□□ 1.79
LSM12-201ENST00000293406 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
LSM12-201ENST00000293406 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
LSM12-201ENST00000293406 CAMSAP2Q08AD1 1489 aa26.2■■□□□ 1.78
LSM12-201ENST00000293406 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
LSM12-201ENST00000293406 TROQ12816 1431 aaPredicted RBP26.19■■□□□ 1.78
LSM12-201ENST00000293406 PRG4Q92954 1404 aaPredicted RBP26.18■■□□□ 1.78
LSM12-201ENST00000293406 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
LSM12-201ENST00000293406 KIAA1107Q9UPP5 1409 aa26.16■■□□□ 1.78
LSM12-201ENST00000293406 B4GALNT3Q6L9W6 998 aa26.16■■□□□ 1.78
LSM12-201ENST00000293406 ADGBQ8N7X0 1667 aa26.15■■□□□ 1.78
LSM12-201ENST00000293406 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
LSM12-201ENST00000293406 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
LSM12-201ENST00000293406 DHX29Q7Z478 1369 aaKnown RBP26.14■■□□□ 1.78
LSM12-201ENST00000293406 USP47Q96K76 1375 aa26.14■■□□□ 1.77
LSM12-201ENST00000293406 GPATCH8Q9UKJ3 1502 aaKnown RBP26.12■■□□□ 1.77
LSM12-201ENST00000293406 ADGRL2O95490 1459 aa26.12■■□□□ 1.77
LSM12-201ENST00000293406 ERICH6Q7L0X2 663 aa26.11■■□□□ 1.77
LSM12-201ENST00000293406 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
LSM12-201ENST00000293406 ZNF777Q9ULD5 760 aaPredicted RBP26.1■■□□□ 1.77
LSM12-201ENST00000293406 PKD2Q13563 968 aa26.1■■□□□ 1.77
LSM12-201ENST00000293406 POLR3GLQ9BT43 218 aa26.09■■□□□ 1.77
LSM12-201ENST00000293406 SMG6Q86US8 1419 aaKnown RBP26.08■■□□□ 1.77
LSM12-201ENST00000293406 KIF14Q15058 1648 aa26.08■■□□□ 1.77
LSM12-201ENST00000293406 BCORL1Q5H9F3 1711 aa26.08■■□□□ 1.77
LSM12-201ENST00000293406 ANKRD30AQ9BXX3 1397 aa26.08■■□□□ 1.76
LSM12-201ENST00000293406 ARID4BQ4LE39 1312 aaPredicted RBP26.07■■□□□ 1.76
LSM12-201ENST00000293406 CNGB1Q14028 1251 aaPredicted RBP26.06■■□□□ 1.76
LSM12-201ENST00000293406 CROCC2H7BZ55 1655 aa26.06■■□□□ 1.76
LSM12-201ENST00000293406 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
LSM12-201ENST00000293406 ADCY10Q96PN6 1610 aa26.04■■□□□ 1.76
LSM12-201ENST00000293406 KDM5CP41229 1560 aa26.04■■□□□ 1.76
LSM12-201ENST00000293406 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
LSM12-201ENST00000293406 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
LSM12-201ENST00000293406 NUDCQ9Y266 331 aa26.02■■□□□ 1.76
LSM12-201ENST00000293406 BCL11AQ9H165 835 aa26.01■■□□□ 1.75
LSM12-201ENST00000293406 ROCK2O75116 1388 aaKnown RBP25.99■■□□□ 1.75
LSM12-201ENST00000293406 UHRF1BP1Q6BDS2 1440 aa25.99■■□□□ 1.75
LSM12-201ENST00000293406 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
LSM12-201ENST00000293406 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
LSM12-201ENST00000293406 NUP155O75694 1391 aa25.95■■□□□ 1.75
LSM12-201ENST00000293406 RNF123Q5XPI4 1314 aa25.95■■□□□ 1.75
LSM12-201ENST00000293406 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
LSM12-201ENST00000293406 CARD11Q9BXL7 1154 aa25.94■■□□□ 1.74
LSM12-201ENST00000293406 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
LSM12-201ENST00000293406 PNISRQ8TF01 805 aaKnown RBP25.94■■□□□ 1.74
LSM12-201ENST00000293406 CARMIL2Q6F5E8 1435 aa25.94■■□□□ 1.74
LSM12-201ENST00000293406 TMC1Q8TDI8 760 aa25.93■■□□□ 1.74
LSM12-201ENST00000293406 ARHGEF12Q9NZN5 1544 aa25.92■■□□□ 1.74
LSM12-201ENST00000293406 SHANK2Q9UPX8 1470 aa25.91■■□□□ 1.74
LSM12-201ENST00000293406 C9orf84Q5VXU9 1444 aa25.91■■□□□ 1.74
LSM12-201ENST00000293406 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
LSM12-201ENST00000293406 KIF15Q9NS87 1388 aa25.89■■□□□ 1.74
LSM12-201ENST00000293406 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.74
LSM12-201ENST00000293406 CCDC136Q96JN2 1154 aa25.88■■□□□ 1.73
LSM12-201ENST00000293406 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
LSM12-201ENST00000293406 CDC42BPAQ5VT25 1732 aa25.87■■□□□ 1.73
LSM12-201ENST00000293406 FBLN2P98095 1184 aa25.86■■□□□ 1.73
LSM12-201ENST00000293406 KDM5DQ9BY66 1539 aa25.86■■□□□ 1.73
LSM12-201ENST00000293406 TSPY4P0CV99 314 aa25.85■■□□□ 1.73
LSM12-201ENST00000293406 TSPY10P0CW01 314 aa25.85■■□□□ 1.73
LSM12-201ENST00000293406 ABCC10Q5T3U5 1492 aa25.85■■□□□ 1.73
LSM12-201ENST00000293406 ST20-MTHFSA0A0A6YYL1 179 aa25.85■■□□□ 1.73
LSM12-201ENST00000293406 KDM2AQ9Y2K7 1162 aa25.85■■□□□ 1.73
LSM12-201ENST00000293406 SENP3-EIF4A1A0A087X0R7 540 aa25.83■■□□□ 1.73
LSM12-201ENST00000293406 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
LSM12-201ENST00000293406 DCAF11Q8TEB1 546 aa25.81■■□□□ 1.72
LSM12-201ENST00000293406 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
LSM12-201ENST00000293406 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
LSM12-201ENST00000293406 MYBBP1AQ9BQG0 1328 aaKnown RBP25.81■■□□□ 1.72
LSM12-201ENST00000293406 NUP160Q12769 1436 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms