RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 FMN1Q68DA7 1419 aa25.07■■□□□ 1.6
LSM11-201ENST00000286307 NUP155O75694 1391 aa25.07■■□□□ 1.6
LSM11-201ENST00000286307 FRAT1Q92837 279 aaPredicted RBP25.07■■□□□ 1.6
LSM11-201ENST00000286307 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
LSM11-201ENST00000286307 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
LSM11-201ENST00000286307 NGDNQ8NEJ9 315 aaKnown RBP25.05■■□□□ 1.6
LSM11-201ENST00000286307 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
LSM11-201ENST00000286307 CASC1Q6TDU7 716 aa25.02■■□□□ 1.6
LSM11-201ENST00000286307 MIER1Q8N108 512 aa25.02■■□□□ 1.6
LSM11-201ENST00000286307 PTPRGP23470 1445 aa25■■□□□ 1.59
LSM11-201ENST00000286307 FHOD3Q2V2M9 1422 aa24.99■■□□□ 1.59
LSM11-201ENST00000286307 MEX3CQ5U5Q3 659 aaKnown RBP24.98■■□□□ 1.59
LSM11-201ENST00000286307 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
LSM11-201ENST00000286307 TMX4Q9H1E5 349 aaPredicted RBP24.97■■□□□ 1.59
LSM11-201ENST00000286307 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
LSM11-201ENST00000286307 ISY1Q9ULR0 285 aaKnown RBP24.94■■□□□ 1.58
LSM11-201ENST00000286307 TPRNQ4KMQ1 711 aa24.94■■□□□ 1.58
LSM11-201ENST00000286307 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
LSM11-201ENST00000286307 LTV1Q96GA3 475 aaPredicted RBP24.91■■□□□ 1.58
LSM11-201ENST00000286307 NAP1L2Q9ULW6 460 aaPredicted RBP24.9■■□□□ 1.58
LSM11-201ENST00000286307 SMARCA4P51532 1647 aa24.89■■□□□ 1.58
LSM11-201ENST00000286307 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.57
LSM11-201ENST00000286307 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
LSM11-201ENST00000286307 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
LSM11-201ENST00000286307 EVA1CP58658 441 aa24.86■■□□□ 1.57
LSM11-201ENST00000286307 FGD1P98174 961 aa24.86■■□□□ 1.57
LSM11-201ENST00000286307 KCNJ4P48050 445 aa24.85■■□□□ 1.57
LSM11-201ENST00000286307 RSPH4AQ5TD94 716 aa24.85■■□□□ 1.57
LSM11-201ENST00000286307 NCLP19338 710 aaKnown RBP24.84■■□□□ 1.57
LSM11-201ENST00000286307 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
LSM11-201ENST00000286307 AMPHP49418 695 aa24.83■■□□□ 1.57
LSM11-201ENST00000286307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.57
LSM11-201ENST00000286307 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
LSM11-201ENST00000286307 MSH5O43196 834 aa24.81■■□□□ 1.56
LSM11-201ENST00000286307 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
LSM11-201ENST00000286307 U2AF1L5P0DN76 240 aaPredicted RBP24.8■■□□□ 1.56
LSM11-201ENST00000286307 U2AF1Q01081 240 aaKnown RBP eCLIP24.8■■□□□ 1.56
LSM11-201ENST00000286307 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
LSM11-201ENST00000286307 G3V3G9 751 aa24.79■■□□□ 1.56
LSM11-201ENST00000286307 DCAF8Q5TAQ9 597 aa24.79■■□□□ 1.56
LSM11-201ENST00000286307 EIF3AQ14152 1382 aaKnown RBP24.79■■□□□ 1.56
LSM11-201ENST00000286307 TERF2IPQ9NYB0 399 aa24.79■■□□□ 1.56
LSM11-201ENST00000286307 ZRSR1Q15695 479 aaKnown RBP24.76■■□□□ 1.55
LSM11-201ENST00000286307 HSPA5P11021 654 aaKnown RBP24.76■■□□□ 1.55
LSM11-201ENST00000286307 MS4A1P11836 297 aa24.75■■□□□ 1.55
LSM11-201ENST00000286307 CHMP3Q9Y3E7 222 aa24.73■■□□□ 1.55
LSM11-201ENST00000286307 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
LSM11-201ENST00000286307 BECN1Q14457 450 aa24.73■■□□□ 1.55
LSM11-201ENST00000286307 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
LSM11-201ENST00000286307 GTF2E1P29083 439 aaPredicted RBP24.7■■□□□ 1.54
LSM11-201ENST00000286307 RGS3P49796 1198 aa24.7■■□□□ 1.54
LSM11-201ENST00000286307 NBR1Q14596 966 aa24.7■■□□□ 1.54
LSM11-201ENST00000286307 APBB1O00213 710 aa24.7■■□□□ 1.54
LSM11-201ENST00000286307 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.54
LSM11-201ENST00000286307 KTN1Q86UP2 1357 aaKnown RBP24.68■■□□□ 1.54
LSM11-201ENST00000286307 TAF7LQ5H9L4 462 aa24.68■■□□□ 1.54
LSM11-201ENST00000286307 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
LSM11-201ENST00000286307 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
LSM11-201ENST00000286307 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
LSM11-201ENST00000286307 CLSTN1O94985 981 aa24.64■■□□□ 1.53
LSM11-201ENST00000286307 CALD1Q05682 793 aaKnown RBP24.63■■□□□ 1.53
LSM11-201ENST00000286307 EIF5BO60841 1220 aaKnown RBP24.63■■□□□ 1.53
LSM11-201ENST00000286307 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.63■■□□□ 1.53
LSM11-201ENST00000286307 ATF3P18847 181 aa24.62■■□□□ 1.53
LSM11-201ENST00000286307 PSME1Q06323 249 aa24.61■■□□□ 1.53
LSM11-201ENST00000286307 VGFO15240 615 aaPredicted RBP24.61■■□□□ 1.53
LSM11-201ENST00000286307 KLHL34Q8N239 644 aa24.6■■□□□ 1.53
LSM11-201ENST00000286307 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
LSM11-201ENST00000286307 GORABQ5T7V8 394 aa24.6■■□□□ 1.53
LSM11-201ENST00000286307 GOLGA6L22H0YM25 854 aa24.6■■□□□ 1.53
LSM11-201ENST00000286307 STK31Q9BXU1 1019 aa24.59■■□□□ 1.53
LSM11-201ENST00000286307 SYTL4Q96C24 671 aaPredicted RBP24.59■■□□□ 1.53
LSM11-201ENST00000286307 MINK1Q8N4C8 1332 aaPredicted RBP24.58■■□□□ 1.53
LSM11-201ENST00000286307 DDRGK1Q96HY6 314 aa24.55■■□□□ 1.52
LSM11-201ENST00000286307 CCDC144AA2RUR9 1427 aa24.54■■□□□ 1.52
LSM11-201ENST00000286307 NCBP3Q53F19 620 aaKnown RBP24.53■■□□□ 1.52
LSM11-201ENST00000286307 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
LSM11-201ENST00000286307 COG3Q96JB2 828 aa24.52■■□□□ 1.52
LSM11-201ENST00000286307 FRAT2O75474 233 aaPredicted RBP24.51■■□□□ 1.51
LSM11-201ENST00000286307 IPO8O15397 1037 aaKnown RBP24.51■■□□□ 1.51
LSM11-201ENST00000286307 UACAQ9BZF9 1416 aa24.51■■□□□ 1.51
LSM11-201ENST00000286307 SLC4A10Q6U841 1118 aa24.5■■□□□ 1.51
LSM11-201ENST00000286307 TIMELESSQ9UNS1 1208 aa24.5■■□□□ 1.51
LSM11-201ENST00000286307 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.48■■□□□ 1.51
LSM11-201ENST00000286307 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
LSM11-201ENST00000286307 CHMP4AQ9BY43 222 aa24.48■■□□□ 1.51
LSM11-201ENST00000286307 ITPRIPQ8IWB1 547 aa24.47■■□□□ 1.51
LSM11-201ENST00000286307 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
LSM11-201ENST00000286307 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
LSM11-201ENST00000286307 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
LSM11-201ENST00000286307 EVC2Q86UK5 1308 aa24.44■■□□□ 1.5
LSM11-201ENST00000286307 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
LSM11-201ENST00000286307 NESP48681 1621 aa24.43■■□□□ 1.5
LSM11-201ENST00000286307 MCCP23508 829 aa24.43■■□□□ 1.5
LSM11-201ENST00000286307 GNL2Q13823 731 aaKnown RBP24.42■■□□□ 1.5
LSM11-201ENST00000286307 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
LSM11-201ENST00000286307 KIAA1211Q6ZU35 1233 aa24.4■■□□□ 1.5
LSM11-201ENST00000286307 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
LSM11-201ENST00000286307 RALBP1Q15311 655 aa24.4■■□□□ 1.5
LSM11-201ENST00000286307 B4GALNT3Q6L9W6 998 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms