RNA–Protein interactions for RNA: ENST00000282260.10

HOMER1-201, Transcript of homer scaffold protein 1, humanhuman

TSL 1 (best) BASIC

Gene HOMER1, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-201ENST00000282260 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
HOMER1-201ENST00000282260 SNPHO15079 494 aa10.56□□□□□ -0.72
HOMER1-201ENST00000282260 PPP1R37O75864 691 aa10.56□□□□□ -0.72
HOMER1-201ENST00000282260 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
HOMER1-201ENST00000282260 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
HOMER1-201ENST00000282260 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.55□□□□□ -0.72
HOMER1-201ENST00000282260 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
HOMER1-201ENST00000282260 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
HOMER1-201ENST00000282260 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
HOMER1-201ENST00000282260 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
HOMER1-201ENST00000282260 EMP3P54852 163 aa10.48□□□□□ -0.73
HOMER1-201ENST00000282260 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
HOMER1-201ENST00000282260 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
HOMER1-201ENST00000282260 KCNV2Q8TDN2 545 aa10.47□□□□□ -0.73
HOMER1-201ENST00000282260 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
HOMER1-201ENST00000282260 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
HOMER1-201ENST00000282260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■■■■□ 21.3
HOMER1-201ENST00000282260 NLRP6P59044 892 aa10.45□□□□□ -0.74
HOMER1-201ENST00000282260 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
HOMER1-201ENST00000282260 SOX12O15370 315 aa10.44□□□□□ -0.74
HOMER1-201ENST00000282260 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
HOMER1-201ENST00000282260 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
HOMER1-201ENST00000282260 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
HOMER1-201ENST00000282260 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
HOMER1-201ENST00000282260 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
HOMER1-201ENST00000282260 ILDR1Q86SU0 546 aaPredicted RBP10.39□□□□□ -0.75
HOMER1-201ENST00000282260 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
HOMER1-201ENST00000282260 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
HOMER1-201ENST00000282260 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
HOMER1-201ENST00000282260 G3V3G9 751 aa10.32□□□□□ -0.76
HOMER1-201ENST00000282260 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
HOMER1-201ENST00000282260 E2F4Q16254 413 aa10.29□□□□□ -0.76
HOMER1-201ENST00000282260 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
HOMER1-201ENST00000282260 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
HOMER1-201ENST00000282260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
HOMER1-201ENST00000282260 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
HOMER1-201ENST00000282260 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
HOMER1-201ENST00000282260 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
HOMER1-201ENST00000282260 MFSD10Q14728 455 aa10.24□□□□□ -0.77
HOMER1-201ENST00000282260 SEMA3EO15041 775 aa10.23□□□□□ -0.77
HOMER1-201ENST00000282260 PDE4AP27815 886 aa10.23□□□□□ -0.77
HOMER1-201ENST00000282260 RNF166Q96A37 237 aaPredicted RBP10.21□□□□□ -0.77
HOMER1-201ENST00000282260 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
HOMER1-201ENST00000282260 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
HOMER1-201ENST00000282260 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
HOMER1-201ENST00000282260 ERBB3P21860 1342 aa10.16□□□□□ -0.78
HOMER1-201ENST00000282260 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
HOMER1-201ENST00000282260 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
HOMER1-201ENST00000282260 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
HOMER1-201ENST00000282260 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
HOMER1-201ENST00000282260 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
HOMER1-201ENST00000282260 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
HOMER1-201ENST00000282260 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
HOMER1-201ENST00000282260 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
HOMER1-201ENST00000282260 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
HOMER1-201ENST00000282260 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
HOMER1-201ENST00000282260 DSG2Q14126 1118 aa10.1□□□□□ -0.79
HOMER1-201ENST00000282260 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
HOMER1-201ENST00000282260 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
HOMER1-201ENST00000282260 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
HOMER1-201ENST00000282260 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
HOMER1-201ENST00000282260 MLLT3P42568 568 aaPredicted RBP10.07□□□□□ -0.8
HOMER1-201ENST00000282260 DPYSL4O14531 572 aa10.05□□□□□ -0.8
HOMER1-201ENST00000282260 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
HOMER1-201ENST00000282260 FOXK1P85037 733 aa10.02□□□□□ -0.81
HOMER1-201ENST00000282260 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
HOMER1-201ENST00000282260 SLC24A3Q9HC58 644 aa10.02□□□□□ -0.81
HOMER1-201ENST00000282260 ZSWIM6Q9HCJ5 1215 aa10.02□□□□□ -0.81
HOMER1-201ENST00000282260 KIF3CO14782 793 aa10.01□□□□□ -0.81
HOMER1-201ENST00000282260 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
HOMER1-201ENST00000282260 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
HOMER1-201ENST00000282260 PLPP6Q8IY26 295 aa9.99□□□□□ -0.81
HOMER1-201ENST00000282260 ZMYND10O75800 440 aa9.98□□□□□ -0.81
HOMER1-201ENST00000282260 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
HOMER1-201ENST00000282260 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
HOMER1-201ENST00000282260 PTGER2P43116 358 aa9.97□□□□□ -0.81
HOMER1-201ENST00000282260 PDIA6Q15084 440 aa9.97□□□□□ -0.81
HOMER1-201ENST00000282260 GPR153Q6NV75 609 aa9.96□□□□□ -0.82
HOMER1-201ENST00000282260 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
HOMER1-201ENST00000282260 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
HOMER1-201ENST00000282260 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
HOMER1-201ENST00000282260 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
HOMER1-201ENST00000282260 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
HOMER1-201ENST00000282260 ANKRD13DQ6ZTN6 518 aa9.91□□□□□ -0.82
HOMER1-201ENST00000282260 GPIHBP1Q8IV16 184 aa9.91□□□□□ -0.82
HOMER1-201ENST00000282260 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
HOMER1-201ENST00000282260 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
HOMER1-201ENST00000282260 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
HOMER1-201ENST00000282260 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
HOMER1-201ENST00000282260 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
HOMER1-201ENST00000282260 GPR37O15354 613 aa9.86□□□□□ -0.83
HOMER1-201ENST00000282260 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
HOMER1-201ENST00000282260 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.83
HOMER1-201ENST00000282260 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
HOMER1-201ENST00000282260 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
HOMER1-201ENST00000282260 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
HOMER1-201ENST00000282260 OSBPP22059 807 aa9.81□□□□□ -0.84
HOMER1-201ENST00000282260 DDX12PQ92771 950 aa9.81□□□□□ -0.84
HOMER1-201ENST00000282260 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
HOMER1-201ENST00000282260 PLA2G2EQ9NZK7 142 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms