RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 ARID4BQ4LE39 1312 aaPredicted RBP31.31■■■□□ 2.6
MSGN1-201ENST00000281047 MAGI2Q86UL8 1455 aa31.31■■■□□ 2.6
MSGN1-201ENST00000281047 ARHGAP5Q13017 1502 aa31.3■■■□□ 2.6
MSGN1-201ENST00000281047 ZFYVE16Q7Z3T8 1539 aa31.28■■■□□ 2.6
MSGN1-201ENST00000281047 ADAMTSL3P82987 1691 aa31.24■■■□□ 2.59
MSGN1-201ENST00000281047 BCORL1Q5H9F3 1711 aa31.22■■■□□ 2.59
MSGN1-201ENST00000281047 YEATS2Q9ULM3 1422 aa31.22■■■□□ 2.59
MSGN1-201ENST00000281047 CEP162Q5TB80 1403 aa31.2■■■□□ 2.59
MSGN1-201ENST00000281047 ZNF518AQ6AHZ1 1483 aa31.2■■■□□ 2.58
MSGN1-201ENST00000281047 PREX2Q70Z35 1606 aa31.18■■■□□ 2.58
MSGN1-201ENST00000281047 CDC42BPBQ9Y5S2 1711 aa31.17■■■□□ 2.58
MSGN1-201ENST00000281047 PTPRMP28827 1452 aa31.16■■■□□ 2.58
MSGN1-201ENST00000281047 HECW2Q9P2P5 1572 aa31.15■■■□□ 2.58
MSGN1-201ENST00000281047 MADDQ8WXG6 1647 aa31.12■■■□□ 2.57
MSGN1-201ENST00000281047 ATP10AO60312 1499 aa31.11■■■□□ 2.57
MSGN1-201ENST00000281047 KDM5CP41229 1560 aa31.11■■■□□ 2.57
MSGN1-201ENST00000281047 AFAP1Q8N556 730 aa31.11■■■□□ 2.57
MSGN1-201ENST00000281047 ABCC1P33527 1531 aa31.08■■■□□ 2.57
MSGN1-201ENST00000281047 C9orf84Q5VXU9 1444 aa31.08■■■□□ 2.57
MSGN1-201ENST00000281047 MTUS2Q5JR59 1369 aa31.08■■■□□ 2.57
MSGN1-201ENST00000281047 CDC42BPAQ5VT25 1732 aa31.08■■■□□ 2.57
MSGN1-201ENST00000281047 MYT1LQ9UL68 1186 aa31.06■■■□□ 2.56
MSGN1-201ENST00000281047 SIGLEC1Q9BZZ2 1709 aa31.04■■■□□ 2.56
MSGN1-201ENST00000281047 GPATCH8Q9UKJ3 1502 aaKnown RBP31.03■■■□□ 2.56
MSGN1-201ENST00000281047 RIMS1Q86UR5 1692 aaKnown RBP31.02■■■□□ 2.56
MSGN1-201ENST00000281047 ARHGEF12Q9NZN5 1544 aa31.02■■■□□ 2.56
MSGN1-201ENST00000281047 MLH3Q9UHC1 1453 aa31.01■■■□□ 2.56
MSGN1-201ENST00000281047 TRAPPC8Q9Y2L5 1435 aa31.01■■■□□ 2.55
MSGN1-201ENST00000281047 ITSN2Q9NZM3 1697 aa31.01■■■□□ 2.55
MSGN1-201ENST00000281047 CCNB3Q8WWL7 1395 aa31.01■■■□□ 2.55
MSGN1-201ENST00000281047 MLECQ14165 292 aa31■■■□□ 2.55
MSGN1-201ENST00000281047 ZNF777Q9ULD5 760 aaPredicted RBP31■■■□□ 2.55
MSGN1-201ENST00000281047 LOC105371045A0A1W2PR82 267 aa30.98■■■□□ 2.55
MSGN1-201ENST00000281047 EHBP1L1Q8N3D4 1523 aa30.98■■■□□ 2.55
MSGN1-201ENST00000281047 CFDP1Q9UEE9 299 aaPredicted RBP30.97■■■□□ 2.55
MSGN1-201ENST00000281047 DIP2CQ9Y2E4 1556 aa30.96■■■□□ 2.55
MSGN1-201ENST00000281047 SAMD9LQ8IVG5 1584 aa30.95■■■□□ 2.54
MSGN1-201ENST00000281047 PLEKHH2Q8IVE3 1493 aa30.93■■■□□ 2.54
MSGN1-201ENST00000281047 REREQ9P2R6 1566 aa30.92■■■□□ 2.54
MSGN1-201ENST00000281047 SYCP2Q9BX26 1530 aa30.92■■■□□ 2.54
MSGN1-201ENST00000281047 FER1L4A9Z1Z3 1794 aa30.91■■■□□ 2.54
MSGN1-201ENST00000281047 ABCA6Q8N139 1617 aa30.91■■■□□ 2.54
MSGN1-201ENST00000281047 KIAA1107Q9UPP5 1409 aa30.9■■■□□ 2.54
MSGN1-201ENST00000281047 VPS8Q8N3P4 1428 aa30.87■■■□□ 2.53
MSGN1-201ENST00000281047 HNRNPMP52272 730 aaKnown RBP eCLIP30.86■■■□□ 2.53
MSGN1-201ENST00000281047 PLPPR3Q6T4P5 718 aa30.86■■■□□ 2.53
MSGN1-201ENST00000281047 TIAM1Q13009 1591 aa30.86■■■□□ 2.53
MSGN1-201ENST00000281047 KIDINS220Q9ULH0 1771 aa30.84■■■□□ 2.53
MSGN1-201ENST00000281047 SPAG9O60271 1321 aaKnown RBP30.84■■■□□ 2.53
MSGN1-201ENST00000281047 AGLP35573 1532 aa30.83■■■□□ 2.53
MSGN1-201ENST00000281047 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
MSGN1-201ENST00000281047 SUPT6HQ7KZ85 1726 aaKnown RBP30.78■■■□□ 2.52
MSGN1-201ENST00000281047 NCOA2Q15596 1464 aa30.76■■■□□ 2.52
MSGN1-201ENST00000281047 ATP7AQ04656 1500 aa30.76■■■□□ 2.51
MSGN1-201ENST00000281047 ESF1Q9H501 851 aaKnown RBP30.74■■■□□ 2.51
MSGN1-201ENST00000281047 ZNF644Q9H582 1327 aaPredicted RBP30.73■■■□□ 2.51
MSGN1-201ENST00000281047 INO80Q9ULG1 1556 aaPredicted RBP30.73■■■□□ 2.51
MSGN1-201ENST00000281047 LRRC9Q6ZRR7 1453 aa30.7■■■□□ 2.5
MSGN1-201ENST00000281047 MBD5Q9P267 1494 aa30.7■■■□□ 2.5
MSGN1-201ENST00000281047 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
MSGN1-201ENST00000281047 CEBPAP49715 358 aaPredicted RBP30.68■■■□□ 2.5
MSGN1-201ENST00000281047 A2MP01023 1474 aa30.65■■■□□ 2.5
MSGN1-201ENST00000281047 CNTLNQ9NXG0 1405 aa30.64■■■□□ 2.5
MSGN1-201ENST00000281047 CAMSAP2Q08AD1 1489 aa30.63■■■□□ 2.49
MSGN1-201ENST00000281047 HSPA2P54652 639 aa30.63■■■□□ 2.49
MSGN1-201ENST00000281047 RTEL1-TNFRSF6BF6WH68 1400 aa30.63■■■□□ 2.49
MSGN1-201ENST00000281047 PLXNC1O60486 1568 aa30.62■■■□□ 2.49
MSGN1-201ENST00000281047 PREX1Q8TCU6 1659 aa30.62■■■□□ 2.49
MSGN1-201ENST00000281047 RSPH4AQ5TD94 716 aa30.61■■■□□ 2.49
MSGN1-201ENST00000281047 CCDC141Q6ZP82 1450 aa30.6■■■□□ 2.49
MSGN1-201ENST00000281047 ADGBQ8N7X0 1667 aa30.59■■■□□ 2.49
MSGN1-201ENST00000281047 KANK4Q5T7N3 995 aaPredicted RBP30.57■■■□□ 2.48
MSGN1-201ENST00000281047 C3P01024 1663 aa30.57■■■□□ 2.48
MSGN1-201ENST00000281047 UHRF1BP1Q6BDS2 1440 aa30.56■■■□□ 2.48
MSGN1-201ENST00000281047 APLP2Q06481 763 aa30.55■■■□□ 2.48
MSGN1-201ENST00000281047 ILDR1Q86SU0 546 aaPredicted RBP30.52■■■□□ 2.48
MSGN1-201ENST00000281047 ARHGEF5Q12774 1597 aa30.51■■■□□ 2.47
MSGN1-201ENST00000281047 SETD1BQ9UPS6 1966 aaKnown RBP30.51■■■□□ 2.47
MSGN1-201ENST00000281047 MROH2AA6NES4 1674 aa30.51■■■□□ 2.47
MSGN1-201ENST00000281047 GGT6Q6P531 493 aa30.5■■■□□ 2.47
MSGN1-201ENST00000281047 DHX29Q7Z478 1369 aaKnown RBP30.5■■■□□ 2.47
MSGN1-201ENST00000281047 TSPY4P0CV99 314 aa30.49■■■□□ 2.47
MSGN1-201ENST00000281047 TSPY10P0CW01 314 aa30.49■■■□□ 2.47
MSGN1-201ENST00000281047 MYOM3Q5VTT5 1437 aa30.48■■■□□ 2.47
MSGN1-201ENST00000281047 PPP6R1Q9UPN7 881 aa30.48■■■□□ 2.47
MSGN1-201ENST00000281047 ZMYM3Q14202 1370 aa30.48■■■□□ 2.47
MSGN1-201ENST00000281047 MIA2Q96PC5 1412 aa30.47■■■□□ 2.47
MSGN1-201ENST00000281047 NPATQ14207 1427 aa30.45■■■□□ 2.46
MSGN1-201ENST00000281047 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
MSGN1-201ENST00000281047 KIF3BO15066 747 aa30.38■■■□□ 2.45
MSGN1-201ENST00000281047 DMRT2Q9Y5R5 561 aa30.36■■■□□ 2.45
MSGN1-201ENST00000281047 MAST1Q9Y2H9 1570 aa30.36■■■□□ 2.45
MSGN1-201ENST00000281047 FAM135AQ9P2D6 1515 aa30.32■■■□□ 2.44
MSGN1-201ENST00000281047 PTPRKQ15262 1439 aa30.32■■■□□ 2.44
MSGN1-201ENST00000281047 FBXO41Q8TF61 875 aa30.3■■■□□ 2.44
MSGN1-201ENST00000281047 STRCQ7RTU9 1775 aa30.29■■■□□ 2.44
MSGN1-201ENST00000281047 KDM5DQ9BY66 1539 aa30.28■■■□□ 2.44
MSGN1-201ENST00000281047 PTPN23Q9H3S7 1636 aa30.26■■■□□ 2.44
MSGN1-201ENST00000281047 WASHC2CQ9Y4E1 1318 aa30.25■■■□□ 2.43
MSGN1-201ENST00000281047 MYO3AQ8NEV4 1616 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms