RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 KDM6BO15054 1643 aa15.26■□□□□ 0.03
SEC24D-201ENST00000280551 PTPRGP23470 1445 aa15.26■□□□□ 0.03
SEC24D-201ENST00000280551 DAPK1P53355 1430 aa15.26■□□□□ 0.03
SEC24D-201ENST00000280551 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
SEC24D-201ENST00000280551 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
SEC24D-201ENST00000280551 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
SEC24D-201ENST00000280551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEC24D-201ENST00000280551 ABCC5O15440 1437 aa15.23■□□□□ 0.03
SEC24D-201ENST00000280551 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
SEC24D-201ENST00000280551 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
SEC24D-201ENST00000280551 KDM5DQ9BY66 1539 aa15.22■□□□□ 0.03
SEC24D-201ENST00000280551 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
SEC24D-201ENST00000280551 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.02
SEC24D-201ENST00000280551 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
SEC24D-201ENST00000280551 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SEC24D-201ENST00000280551 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
SEC24D-201ENST00000280551 UNC13BO14795 1591 aa15.13■□□□□ 0.01
SEC24D-201ENST00000280551 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
SEC24D-201ENST00000280551 KIAA1107Q9UPP5 1409 aa15.13■□□□□ 0.01
SEC24D-201ENST00000280551 FBLN2P98095 1184 aa15.13■□□□□ 0.01
SEC24D-201ENST00000280551 ABCC1P33527 1531 aa15.11■□□□□ 0.01
SEC24D-201ENST00000280551 NCOA1Q15788 1441 aa15.11■□□□□ 0.01
SEC24D-201ENST00000280551 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
SEC24D-201ENST00000280551 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
SEC24D-201ENST00000280551 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
SEC24D-201ENST00000280551 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
SEC24D-201ENST00000280551 DEPDC5O75140 1603 aa15.06■□□□□ 0
SEC24D-201ENST00000280551 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
SEC24D-201ENST00000280551 BCORL1Q5H9F3 1711 aa15.06■□□□□ 0
SEC24D-201ENST00000280551 CCDC141Q6ZP82 1450 aa15.06■□□□□ 0
SEC24D-201ENST00000280551 PLCH2O75038 1416 aa15.06■□□□□ 0
SEC24D-201ENST00000280551 PZPP20742 1482 aa15.05■□□□□ 0
SEC24D-201ENST00000280551 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ 0
SEC24D-201ENST00000280551 WDR7Q9Y4E6 1490 aa15.05■□□□□ 0
SEC24D-201ENST00000280551 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
SEC24D-201ENST00000280551 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
SEC24D-201ENST00000280551 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
SEC24D-201ENST00000280551 PLEKHD1A6NEE1 506 aa15.02■□□□□ -0
SEC24D-201ENST00000280551 ARHGEF12Q9NZN5 1544 aa15.02□□□□□ -0.01
SEC24D-201ENST00000280551 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
SEC24D-201ENST00000280551 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
SEC24D-201ENST00000280551 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
SEC24D-201ENST00000280551 GLI2P10070 1586 aa14.98□□□□□ -0.01
SEC24D-201ENST00000280551 MAP3K4Q9Y6R4 1608 aa14.98□□□□□ -0.01
SEC24D-201ENST00000280551 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
SEC24D-201ENST00000280551 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
SEC24D-201ENST00000280551 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
SEC24D-201ENST00000280551 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
SEC24D-201ENST00000280551 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
SEC24D-201ENST00000280551 VWDEQ8N2E2 1590 aa14.96□□□□□ -0.01
SEC24D-201ENST00000280551 DUOX2Q9NRD8 1548 aa14.96□□□□□ -0.01
SEC24D-201ENST00000280551 RPRD2Q5VT52 1461 aaKnown RBP14.96□□□□□ -0.02
SEC24D-201ENST00000280551 KDM5CP41229 1560 aa14.96□□□□□ -0.02
SEC24D-201ENST00000280551 TEX14Q8IWB6 1497 aa14.95□□□□□ -0.02
SEC24D-201ENST00000280551 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
SEC24D-201ENST00000280551 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
SEC24D-201ENST00000280551 ANKRD30BQ9BXX2 1392 aa14.94□□□□□ -0.02
SEC24D-201ENST00000280551 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
SEC24D-201ENST00000280551 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
SEC24D-201ENST00000280551 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
SEC24D-201ENST00000280551 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
SEC24D-201ENST00000280551 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
SEC24D-201ENST00000280551 NEURL4Q96JN8 1562 aa14.92□□□□□ -0.02
SEC24D-201ENST00000280551 ATP10AO60312 1499 aa14.92□□□□□ -0.02
SEC24D-201ENST00000280551 ANKRD50Q9ULJ7 1429 aa14.91□□□□□ -0.02
SEC24D-201ENST00000280551 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
SEC24D-201ENST00000280551 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
SEC24D-201ENST00000280551 KIDINS220Q9ULH0 1771 aa14.9□□□□□ -0.02
SEC24D-201ENST00000280551 ASXL2Q76L83 1435 aa14.9□□□□□ -0.02
SEC24D-201ENST00000280551 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
SEC24D-201ENST00000280551 ITGAEP38570 1179 aa14.9□□□□□ -0.02
SEC24D-201ENST00000280551 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
SEC24D-201ENST00000280551 FAM135AQ9P2D6 1515 aa14.88□□□□□ -0.03
SEC24D-201ENST00000280551 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
SEC24D-201ENST00000280551 PRDM15P57071 1507 aaPredicted RBP14.87□□□□□ -0.03
SEC24D-201ENST00000280551 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
SEC24D-201ENST00000280551 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
SEC24D-201ENST00000280551 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
SEC24D-201ENST00000280551 TET3O43151 1660 aa14.85□□□□□ -0.03
SEC24D-201ENST00000280551 LAMC1P11047 1609 aa14.85□□□□□ -0.03
SEC24D-201ENST00000280551 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
SEC24D-201ENST00000280551 CEP152O94986 1710 aa14.83□□□□□ -0.04
SEC24D-201ENST00000280551 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
SEC24D-201ENST00000280551 MPHOSPH9Q99550 1183 aa14.83□□□□□ -0.04
SEC24D-201ENST00000280551 E9PCH4 1651 aa14.83□□□□□ -0.04
SEC24D-201ENST00000280551 FANCAO15360 1455 aa14.83□□□□□ -0.04
SEC24D-201ENST00000280551 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
SEC24D-201ENST00000280551 LMTK2Q8IWU2 1503 aa14.82□□□□□ -0.04
SEC24D-201ENST00000280551 NEO1Q92859 1461 aa14.82□□□□□ -0.04
SEC24D-201ENST00000280551 UHRF1BP1Q6BDS2 1440 aa14.82□□□□□ -0.04
SEC24D-201ENST00000280551 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
SEC24D-201ENST00000280551 SPHKAPQ2M3C7 1700 aa14.81□□□□□ -0.04
SEC24D-201ENST00000280551 DIP2BQ9P265 1576 aa14.8□□□□□ -0.04
SEC24D-201ENST00000280551 MYT1Q01538 1121 aa14.8□□□□□ -0.04
SEC24D-201ENST00000280551 FRMPD1Q5SYB0 1578 aa14.79□□□□□ -0.04
SEC24D-201ENST00000280551 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
SEC24D-201ENST00000280551 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
SEC24D-201ENST00000280551 MLH3Q9UHC1 1453 aa14.79□□□□□ -0.04
SEC24D-201ENST00000280551 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
SEC24D-201ENST00000280551 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms