RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.27
CAPN10-201ENST00000270361 DNMT1P26358 1616 aaKnown RBP29.19■■■□□ 2.26
CAPN10-201ENST00000270361 CDK11AQ9UQ88 783 aaPredicted RBP29.19■■■□□ 2.26
CAPN10-201ENST00000270361 ABCC5O15440 1437 aa29.17■■■□□ 2.26
CAPN10-201ENST00000270361 TEX14Q8IWB6 1497 aa29.17■■■□□ 2.26
CAPN10-201ENST00000270361 FANCIQ9NVI1 1328 aa29.15■■■□□ 2.26
CAPN10-201ENST00000270361 FOXD1Q16676 465 aa29.14■■■□□ 2.26
CAPN10-201ENST00000270361 C11orf95C9JLR9 678 aaPredicted RBP29.12■■■□□ 2.25
CAPN10-201ENST00000270361 SPATA31E1Q6ZUB1 1445 aa29.12■■■□□ 2.25
CAPN10-201ENST00000270361 KIAA0586Q9BVV6 1533 aa29.12■■■□□ 2.25
CAPN10-201ENST00000270361 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
CAPN10-201ENST00000270361 ZBED9Q6R2W3 1325 aa29.11■■■□□ 2.25
CAPN10-201ENST00000270361 SLC4A1APQ9BWU0 796 aaKnown RBP29.11■■■□□ 2.25
CAPN10-201ENST00000270361 PPP4R2Q9NY27 417 aa29.11■■■□□ 2.25
CAPN10-201ENST00000270361 NBPF8Q3BBV2 869 aa29.1■■■□□ 2.25
CAPN10-201ENST00000270361 MRS2Q9HD23 443 aa29.1■■■□□ 2.25
CAPN10-201ENST00000270361 KIAA0556O60303 1618 aa29.09■■■□□ 2.25
CAPN10-201ENST00000270361 ARID3CA6NKF2 412 aa29.09■■■□□ 2.25
CAPN10-201ENST00000270361 CCDC184Q52MB2 194 aa29.07■■■□□ 2.24
CAPN10-201ENST00000270361 NUP153P49790 1475 aaKnown RBP29.06■■■□□ 2.24
CAPN10-201ENST00000270361 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
CAPN10-201ENST00000270361 IRX6P78412 446 aaPredicted RBP29.06■■■□□ 2.24
CAPN10-201ENST00000270361 DISP1Q96F81 1524 aa29.06■■■□□ 2.24
CAPN10-201ENST00000270361 KIF7Q2M1P5 1343 aa29.05■■■□□ 2.24
CAPN10-201ENST00000270361 MSH5O43196 834 aa29.04■■■□□ 2.24
CAPN10-201ENST00000270361 FAM9BQ8IZU0 186 aa29.04■■■□□ 2.24
CAPN10-201ENST00000270361 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
CAPN10-201ENST00000270361 DNAJC5BQ9UF47 199 aa29.03■■■□□ 2.24
CAPN10-201ENST00000270361 RAPGEF6Q8TEU7 1601 aa29.03■■■□□ 2.24
CAPN10-201ENST00000270361 ZNF644Q9H582 1327 aaPredicted RBP29■■■□□ 2.23
CAPN10-201ENST00000270361 TROQ12816 1431 aaPredicted RBP28.97■■■□□ 2.23
CAPN10-201ENST00000270361 PZPP20742 1482 aa28.97■■■□□ 2.23
CAPN10-201ENST00000270361 CAMSAP2Q08AD1 1489 aa28.94■■■□□ 2.22
CAPN10-201ENST00000270361 ARID4BQ4LE39 1312 aaPredicted RBP28.93■■■□□ 2.22
CAPN10-201ENST00000270361 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
CAPN10-201ENST00000270361 BCL11AQ9H165 835 aa28.93■■■□□ 2.22
CAPN10-201ENST00000270361 CFDP1Q9UEE9 299 aaPredicted RBP28.93■■■□□ 2.22
CAPN10-201ENST00000270361 KIAA1107Q9UPP5 1409 aa28.92■■■□□ 2.22
CAPN10-201ENST00000270361 MBD5Q9P267 1494 aa28.92■■■□□ 2.22
CAPN10-201ENST00000270361 ADGRL2O95490 1459 aa28.92■■■□□ 2.22
CAPN10-201ENST00000270361 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
CAPN10-201ENST00000270361 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
CAPN10-201ENST00000270361 ZNF608Q9ULD9 1512 aaPredicted RBP28.9■■■□□ 2.22
CAPN10-201ENST00000270361 ERICH6Q7L0X2 663 aa28.88■■■□□ 2.21
CAPN10-201ENST00000270361 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
CAPN10-201ENST00000270361 GPATCH8Q9UKJ3 1502 aaKnown RBP28.86■■■□□ 2.21
CAPN10-201ENST00000270361 USP47Q96K76 1375 aa28.86■■■□□ 2.21
CAPN10-201ENST00000270361 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
CAPN10-201ENST00000270361 DHX29Q7Z478 1369 aaKnown RBP28.85■■■□□ 2.21
CAPN10-201ENST00000270361 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
CAPN10-201ENST00000270361 ADCY10Q96PN6 1610 aa28.83■■■□□ 2.21
CAPN10-201ENST00000270361 KIF14Q15058 1648 aa28.83■■■□□ 2.21
CAPN10-201ENST00000270361 ROCK2O75116 1388 aaKnown RBP28.81■■■□□ 2.2
CAPN10-201ENST00000270361 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
CAPN10-201ENST00000270361 PKD2Q13563 968 aa28.79■■■□□ 2.2
CAPN10-201ENST00000270361 B4GALNT3Q6L9W6 998 aa28.77■■■□□ 2.2
CAPN10-201ENST00000270361 UHRF1BP1Q6BDS2 1440 aa28.77■■■□□ 2.2
CAPN10-201ENST00000270361 ANKRD50Q9ULJ7 1429 aa28.77■■■□□ 2.2
CAPN10-201ENST00000270361 KDM5CP41229 1560 aa28.75■■■□□ 2.19
CAPN10-201ENST00000270361 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
CAPN10-201ENST00000270361 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
CAPN10-201ENST00000270361 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
CAPN10-201ENST00000270361 PLB1Q6P1J6 1458 aa28.74■■■□□ 2.19
CAPN10-201ENST00000270361 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
CAPN10-201ENST00000270361 MYT1LQ9UL68 1186 aa28.73■■■□□ 2.19
CAPN10-201ENST00000270361 CARMIL2Q6F5E8 1435 aa28.73■■■□□ 2.19
CAPN10-201ENST00000270361 RALGAPBQ86X10 1494 aa28.72■■■□□ 2.19
CAPN10-201ENST00000270361 BCORL1Q5H9F3 1711 aa28.72■■■□□ 2.19
CAPN10-201ENST00000270361 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
CAPN10-201ENST00000270361 ARHGEF12Q9NZN5 1544 aa28.71■■■□□ 2.19
CAPN10-201ENST00000270361 ZNF326Q5BKZ1 582 aaKnown RBP28.71■■■□□ 2.19
CAPN10-201ENST00000270361 RNF123Q5XPI4 1314 aa28.7■■■□□ 2.18
CAPN10-201ENST00000270361 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
CAPN10-201ENST00000270361 CHMP7Q8WUX9 453 aaPredicted RBP28.67■■■□□ 2.18
CAPN10-201ENST00000270361 POLR3GLQ9BT43 218 aa28.67■■■□□ 2.18
CAPN10-201ENST00000270361 KTN1Q86UP2 1357 aaKnown RBP28.66■■■□□ 2.18
CAPN10-201ENST00000270361 NUP155O75694 1391 aa28.65■■■□□ 2.18
CAPN10-201ENST00000270361 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.18
CAPN10-201ENST00000270361 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
CAPN10-201ENST00000270361 KIF15Q9NS87 1388 aa28.63■■■□□ 2.17
CAPN10-201ENST00000270361 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
CAPN10-201ENST00000270361 PNISRQ8TF01 805 aaKnown RBP28.63■■■□□ 2.17
CAPN10-201ENST00000270361 CARD11Q9BXL7 1154 aa28.63■■■□□ 2.17
CAPN10-201ENST00000270361 C9orf84Q5VXU9 1444 aa28.63■■■□□ 2.17
CAPN10-201ENST00000270361 TMC1Q8TDI8 760 aa28.63■■■□□ 2.17
CAPN10-201ENST00000270361 TSPY4P0CV99 314 aa28.59■■■□□ 2.17
CAPN10-201ENST00000270361 TSPY10P0CW01 314 aa28.59■■■□□ 2.17
CAPN10-201ENST00000270361 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
CAPN10-201ENST00000270361 ABCC10Q5T3U5 1492 aa28.57■■■□□ 2.16
CAPN10-201ENST00000270361 NUP160Q12769 1436 aa28.56■■■□□ 2.16
CAPN10-201ENST00000270361 RALBP1Q15311 655 aa28.56■■■□□ 2.16
CAPN10-201ENST00000270361 BRD4O60885 1362 aaPredicted RBP28.56■■■□□ 2.16
CAPN10-201ENST00000270361 CCDC136Q96JN2 1154 aa28.55■■■□□ 2.16
CAPN10-201ENST00000270361 CDC42BPAQ5VT25 1732 aa28.55■■■□□ 2.16
CAPN10-201ENST00000270361 PTPRGP23470 1445 aa28.54■■■□□ 2.16
CAPN10-201ENST00000270361 LRPPRCP42704 1394 aaKnown RBP28.53■■■□□ 2.16
CAPN10-201ENST00000270361 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
CAPN10-201ENST00000270361 ABCA8O94911 1581 aa28.52■■■□□ 2.16
CAPN10-201ENST00000270361 MYBBP1AQ9BQG0 1328 aaKnown RBP28.52■■■□□ 2.16
CAPN10-201ENST00000270361 ST20-MTHFSA0A0A6YYL1 179 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms