RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CNTLNQ9NXG0 1405 aa30.67■■■□□ 2.5
CDR2-201ENST00000268383 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
CDR2-201ENST00000268383 AKNAQ7Z591 1439 aa30.65■■■□□ 2.5
CDR2-201ENST00000268383 SLC4A1APQ9BWU0 796 aaKnown RBP30.65■■■□□ 2.5
CDR2-201ENST00000268383 CCDC7Q96M83 1385 aa30.64■■■□□ 2.5
CDR2-201ENST00000268383 PRKRIP1Q9H875 184 aaPredicted RBP30.64■■■□□ 2.5
CDR2-201ENST00000268383 DAPK1P53355 1430 aa30.64■■■□□ 2.49
CDR2-201ENST00000268383 ANKRD30BQ9BXX2 1392 aa30.63■■■□□ 2.49
CDR2-201ENST00000268383 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
CDR2-201ENST00000268383 ABCC5O15440 1437 aa30.61■■■□□ 2.49
CDR2-201ENST00000268383 MRS2Q9HD23 443 aa30.61■■■□□ 2.49
CDR2-201ENST00000268383 NCOA1Q15788 1441 aa30.59■■■□□ 2.49
CDR2-201ENST00000268383 KIF7Q2M1P5 1343 aa30.55■■■□□ 2.48
CDR2-201ENST00000268383 RPRD2Q5VT52 1461 aaKnown RBP30.55■■■□□ 2.48
CDR2-201ENST00000268383 POLR3GLQ9BT43 218 aa30.54■■■□□ 2.48
CDR2-201ENST00000268383 ZNF326Q5BKZ1 582 aaKnown RBP30.54■■■□□ 2.48
CDR2-201ENST00000268383 ZNF777Q9ULD5 760 aaPredicted RBP30.54■■■□□ 2.48
CDR2-201ENST00000268383 TEX14Q8IWB6 1497 aa30.53■■■□□ 2.48
CDR2-201ENST00000268383 SENP3-EIF4A1A0A087X0R7 540 aa30.53■■■□□ 2.48
CDR2-201ENST00000268383 NUP153P49790 1475 aaKnown RBP30.52■■■□□ 2.48
CDR2-201ENST00000268383 DISP1Q96F81 1524 aa30.51■■■□□ 2.48
CDR2-201ENST00000268383 MSH5O43196 834 aa30.51■■■□□ 2.47
CDR2-201ENST00000268383 DNMT1P26358 1616 aaKnown RBP30.48■■■□□ 2.47
CDR2-201ENST00000268383 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
CDR2-201ENST00000268383 ROCK1Q13464 1354 aa30.48■■■□□ 2.47
CDR2-201ENST00000268383 MRC2Q9UBG0 1479 aa30.47■■■□□ 2.47
CDR2-201ENST00000268383 KIAA0556O60303 1618 aa30.46■■■□□ 2.47
CDR2-201ENST00000268383 CDK11AQ9UQ88 783 aaPredicted RBP30.45■■■□□ 2.46
CDR2-201ENST00000268383 CFDP1Q9UEE9 299 aaPredicted RBP30.44■■■□□ 2.46
CDR2-201ENST00000268383 SPATA31E1Q6ZUB1 1445 aa30.44■■■□□ 2.46
CDR2-201ENST00000268383 B4GALNT3Q6L9W6 998 aa30.41■■■□□ 2.46
CDR2-201ENST00000268383 KIAA0586Q9BVV6 1533 aa30.4■■■□□ 2.46
CDR2-201ENST00000268383 PZPP20742 1482 aa30.39■■■□□ 2.45
CDR2-201ENST00000268383 RAPGEF6Q8TEU7 1601 aa30.39■■■□□ 2.45
CDR2-201ENST00000268383 FBLN2P98095 1184 aa30.37■■■□□ 2.45
CDR2-201ENST00000268383 ZBED9Q6R2W3 1325 aa30.35■■■□□ 2.45
CDR2-201ENST00000268383 PKD2Q13563 968 aa30.35■■■□□ 2.45
CDR2-201ENST00000268383 PPP4R2Q9NY27 417 aa30.35■■■□□ 2.45
CDR2-201ENST00000268383 PLB1Q6P1J6 1458 aa30.35■■■□□ 2.45
CDR2-201ENST00000268383 CAMSAP2Q08AD1 1489 aa30.35■■■□□ 2.45
CDR2-201ENST00000268383 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
CDR2-201ENST00000268383 IFT140Q96RY7 1462 aa30.3■■■□□ 2.44
CDR2-201ENST00000268383 KIF14Q15058 1648 aa30.29■■■□□ 2.44
CDR2-201ENST00000268383 TROQ12816 1431 aaPredicted RBP30.28■■■□□ 2.44
CDR2-201ENST00000268383 USP47Q96K76 1375 aa30.27■■■□□ 2.44
CDR2-201ENST00000268383 GPATCH8Q9UKJ3 1502 aaKnown RBP30.27■■■□□ 2.44
CDR2-201ENST00000268383 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.44
CDR2-201ENST00000268383 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
CDR2-201ENST00000268383 DHX29Q7Z478 1369 aaKnown RBP30.25■■■□□ 2.43
CDR2-201ENST00000268383 KIAA1107Q9UPP5 1409 aa30.23■■■□□ 2.43
CDR2-201ENST00000268383 POLR1AO95602 1720 aaPredicted RBP30.22■■■□□ 2.43
CDR2-201ENST00000268383 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
CDR2-201ENST00000268383 KDM2AQ9Y2K7 1162 aa30.21■■■□□ 2.43
CDR2-201ENST00000268383 ERICH6BQ5W0A0 696 aa30.19■■■□□ 2.42
CDR2-201ENST00000268383 MBD5Q9P267 1494 aa30.18■■■□□ 2.42
CDR2-201ENST00000268383 FANCIQ9NVI1 1328 aa30.18■■■□□ 2.42
CDR2-201ENST00000268383 ANKRD50Q9ULJ7 1429 aa30.15■■■□□ 2.42
CDR2-201ENST00000268383 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
CDR2-201ENST00000268383 NUP155O75694 1391 aa30.14■■■□□ 2.42
CDR2-201ENST00000268383 ANKRD30AQ9BXX3 1397 aa30.14■■■□□ 2.42
CDR2-201ENST00000268383 ADGBQ8N7X0 1667 aa30.13■■■□□ 2.41
CDR2-201ENST00000268383 JPH4Q96JJ6 628 aa30.12■■■□□ 2.41
CDR2-201ENST00000268383 CARD11Q9BXL7 1154 aa30.12■■■□□ 2.41
CDR2-201ENST00000268383 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
CDR2-201ENST00000268383 ERICH6Q7L0X2 663 aa30.08■■■□□ 2.41
CDR2-201ENST00000268383 ADGRL2O95490 1459 aa30.07■■■□□ 2.41
CDR2-201ENST00000268383 KDM5CP41229 1560 aa30.07■■■□□ 2.4
CDR2-201ENST00000268383 CROCC2H7BZ55 1655 aa30.07■■■□□ 2.4
CDR2-201ENST00000268383 HNRNPMP52272 730 aaKnown RBP eCLIP30.07■■■□□ 2.4
CDR2-201ENST00000268383 ST20-MTHFSA0A0A6YYL1 179 aa30.06■■■□□ 2.4
CDR2-201ENST00000268383 PLEKHD1A6NEE1 506 aa30.06■■■□□ 2.4
CDR2-201ENST00000268383 TMC1Q8TDI8 760 aa30.04■■■□□ 2.4
CDR2-201ENST00000268383 DCAF11Q8TEB1 546 aa30.04■■■□□ 2.4
CDR2-201ENST00000268383 NUDCQ9Y266 331 aa30.04■■■□□ 2.4
CDR2-201ENST00000268383 BCL11AQ9H165 835 aa30.03■■■□□ 2.4
CDR2-201ENST00000268383 SMG6Q86US8 1419 aaKnown RBP30.03■■■□□ 2.4
CDR2-201ENST00000268383 PNISRQ8TF01 805 aaKnown RBP30.02■■■□□ 2.4
CDR2-201ENST00000268383 C9orf84Q5VXU9 1444 aa30.01■■■□□ 2.4
CDR2-201ENST00000268383 ADCY10Q96PN6 1610 aa29.99■■■□□ 2.39
CDR2-201ENST00000268383 CDC42BPAQ5VT25 1732 aa29.99■■■□□ 2.39
CDR2-201ENST00000268383 SALL2Q9Y467 1007 aaPredicted RBP29.98■■■□□ 2.39
CDR2-201ENST00000268383 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
CDR2-201ENST00000268383 TSPY4P0CV99 314 aa29.98■■■□□ 2.39
CDR2-201ENST00000268383 TSPY10P0CW01 314 aa29.98■■■□□ 2.39
CDR2-201ENST00000268383 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
CDR2-201ENST00000268383 CARMIL2Q6F5E8 1435 aa29.97■■■□□ 2.39
CDR2-201ENST00000268383 MAGI1Q96QZ7 1491 aaPredicted RBP29.96■■■□□ 2.39
CDR2-201ENST00000268383 ATP10BO94823 1461 aa29.94■■■□□ 2.38
CDR2-201ENST00000268383 RALGAPBQ86X10 1494 aa29.94■■■□□ 2.38
CDR2-201ENST00000268383 CCDC136Q96JN2 1154 aa29.94■■■□□ 2.38
CDR2-201ENST00000268383 UHRF1BP1Q6BDS2 1440 aa29.92■■■□□ 2.38
CDR2-201ENST00000268383 KIF15Q9NS87 1388 aa29.92■■■□□ 2.38
CDR2-201ENST00000268383 ABCC10Q5T3U5 1492 aa29.91■■■□□ 2.38
CDR2-201ENST00000268383 RGL3Q3MIN7 710 aa29.91■■■□□ 2.38
CDR2-201ENST00000268383 ARID4BQ4LE39 1312 aaPredicted RBP29.89■■■□□ 2.37
CDR2-201ENST00000268383 RNF123Q5XPI4 1314 aa29.87■■■□□ 2.37
CDR2-201ENST00000268383 ROCK2O75116 1388 aaKnown RBP29.86■■■□□ 2.37
CDR2-201ENST00000268383 NUP160Q12769 1436 aa29.85■■■□□ 2.37
CDR2-201ENST00000268383 NBPF1Q3BBV0 1214 aa29.84■■■□□ 2.37
CDR2-201ENST00000268383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.83■■■□□ 2.375e-8■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms