RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 CDC42BPBQ9Y5S2 1711 aa36.38■■■■□ 3.41
R3HCC1-201ENST00000265806 ABCC5O15440 1437 aa36.38■■■■□ 3.41
R3HCC1-201ENST00000265806 AKNAQ7Z591 1439 aa36.38■■■■□ 3.41
R3HCC1-201ENST00000265806 KCNH8Q96L42 1107 aa36.38■■■■□ 3.41
R3HCC1-201ENST00000265806 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
R3HCC1-201ENST00000265806 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
R3HCC1-201ENST00000265806 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
R3HCC1-201ENST00000265806 NPM1P06748 294 aaKnown RBP eCLIP36.35■■■■□ 3.41
R3HCC1-201ENST00000265806 MYO5CQ9NQX4 1742 aa36.34■■■■□ 3.41
R3HCC1-201ENST00000265806 ZNF777Q9ULD5 760 aaPredicted RBP36.34■■■■□ 3.41
R3HCC1-201ENST00000265806 DHX57Q6P158 1386 aaKnown RBP36.33■■■■□ 3.41
R3HCC1-201ENST00000265806 ASXL2Q76L83 1435 aa36.33■■■■□ 3.41
R3HCC1-201ENST00000265806 NAIPQ13075 1403 aa36.32■■■■□ 3.4
R3HCC1-201ENST00000265806 ROCK1Q13464 1354 aa36.29■■■■□ 3.4
R3HCC1-201ENST00000265806 PLCH2O75038 1416 aa36.27■■■■□ 3.4
R3HCC1-201ENST00000265806 SAMD9LQ8IVG5 1584 aa36.26■■■■□ 3.4
R3HCC1-201ENST00000265806 ARHGAP5Q13017 1502 aa36.26■■■■□ 3.4
R3HCC1-201ENST00000265806 CHIC2Q9UKJ5 165 aa36.26■■■■□ 3.4
R3HCC1-201ENST00000265806 CLSPNQ9HAW4 1339 aa36.25■■■■□ 3.39
R3HCC1-201ENST00000265806 GCC2Q8IWJ2 1684 aa36.25■■■■□ 3.39
R3HCC1-201ENST00000265806 CROCC2H7BZ55 1655 aa36.23■■■■□ 3.39
R3HCC1-201ENST00000265806 ARHGEF5Q12774 1597 aa36.22■■■■□ 3.39
R3HCC1-201ENST00000265806 ARAP3Q8WWN8 1544 aa36.22■■■■□ 3.39
R3HCC1-201ENST00000265806 ABCA9Q8IUA7 1624 aa36.21■■■■□ 3.39
R3HCC1-201ENST00000265806 MBD5Q9P267 1494 aa36.19■■■■□ 3.38
R3HCC1-201ENST00000265806 CYB5RLQ6IPT4 315 aa36.19■■■■□ 3.38
R3HCC1-201ENST00000265806 RRP7BPQ9NSQ0 103 aa36.19■■■■□ 3.38
R3HCC1-201ENST00000265806 SHANK2Q9UPX8 1470 aa36.18■■■■□ 3.38
R3HCC1-201ENST00000265806 ADGRL2O95490 1459 aa36.17■■■■□ 3.38
R3HCC1-201ENST00000265806 PLEKHH2Q8IVE3 1493 aa36.17■■■■□ 3.38
R3HCC1-201ENST00000265806 RSPH4AQ5TD94 716 aa36.15■■■■□ 3.38
R3HCC1-201ENST00000265806 KIAA1107Q9UPP5 1409 aa36.15■■■■□ 3.38
R3HCC1-201ENST00000265806 ADGBQ8N7X0 1667 aa36.15■■■■□ 3.38
R3HCC1-201ENST00000265806 EFCAB2Q5VUJ9 269 aa36.13■■■■□ 3.37
R3HCC1-201ENST00000265806 NCOA1Q15788 1441 aa36.11■■■■□ 3.37
R3HCC1-201ENST00000265806 HNRNPMP52272 730 aaKnown RBP eCLIP36.11■■■■□ 3.37
R3HCC1-201ENST00000265806 CCDC141Q6ZP82 1450 aa36.11■■■■□ 3.37
R3HCC1-201ENST00000265806 MAPKBP1O60336 1514 aa36.09■■■■□ 3.37
R3HCC1-201ENST00000265806 SYCP2Q9BX26 1530 aa36.09■■■■□ 3.37
R3HCC1-201ENST00000265806 C9orf84Q5VXU9 1444 aa36.07■■■■□ 3.37
R3HCC1-201ENST00000265806 ANKRD30AQ9BXX3 1397 aa36.06■■■■□ 3.36
R3HCC1-201ENST00000265806 TSPY4P0CV99 314 aa36.05■■■■□ 3.36
R3HCC1-201ENST00000265806 TSPY10P0CW01 314 aa36.05■■■■□ 3.36
R3HCC1-201ENST00000265806 ACIN1Q9UKV3 1341 aaKnown RBP36.03■■■■□ 3.36
R3HCC1-201ENST00000265806 ABCC1P33527 1531 aa36.02■■■■□ 3.36
R3HCC1-201ENST00000265806 KDM6BO15054 1643 aa36.01■■■■□ 3.36
R3HCC1-201ENST00000265806 ARHGEF12Q9NZN5 1544 aa35.99■■■■□ 3.35
R3HCC1-201ENST00000265806 MAST1Q9Y2H9 1570 aa35.98■■■■□ 3.35
R3HCC1-201ENST00000265806 FANCAO15360 1455 aa35.97■■■■□ 3.35
R3HCC1-201ENST00000265806 CD109Q6YHK3 1445 aa35.9■■■■□ 3.34
R3HCC1-201ENST00000265806 ANKRD50Q9ULJ7 1429 aa35.86■■■■□ 3.33
R3HCC1-201ENST00000265806 KIF15Q9NS87 1388 aa35.85■■■■□ 3.33
R3HCC1-201ENST00000265806 TRAPPC8Q9Y2L5 1435 aa35.85■■■■□ 3.33
R3HCC1-201ENST00000265806 GLI2P10070 1586 aa35.83■■■■□ 3.33
R3HCC1-201ENST00000265806 PLXNC1O60486 1568 aa35.83■■■■□ 3.33
R3HCC1-201ENST00000265806 CFAP74Q9C0B2 1584 aa35.82■■■■□ 3.32
R3HCC1-201ENST00000265806 TRIM52Q96A61 297 aa35.81■■■■□ 3.32
R3HCC1-201ENST00000265806 ADGRL1O94910 1474 aa35.81■■■■□ 3.32
R3HCC1-201ENST00000265806 RTEL1-TNFRSF6BF6WH68 1400 aa35.76■■■■□ 3.32
R3HCC1-201ENST00000265806 SCAPERQ9BY12 1400 aa35.76■■■■□ 3.32
R3HCC1-201ENST00000265806 MAP3K4Q9Y6R4 1608 aa35.75■■■■□ 3.31
R3HCC1-201ENST00000265806 DENND4BO75064 1496 aaPredicted RBP35.73■■■■□ 3.31
R3HCC1-201ENST00000265806 MPHOSPH9Q99550 1183 aa35.72■■■■□ 3.31
R3HCC1-201ENST00000265806 DIP2BQ9P265 1576 aa35.71■■■■□ 3.31
R3HCC1-201ENST00000265806 AFAP1Q8N556 730 aa35.71■■■■□ 3.31
R3HCC1-201ENST00000265806 NEO1Q92859 1461 aa35.7■■■■□ 3.31
R3HCC1-201ENST00000265806 SPAG9O60271 1321 aaKnown RBP35.7■■■■□ 3.31
R3HCC1-201ENST00000265806 ZFYVE16Q7Z3T8 1539 aa35.68■■■■□ 3.3
R3HCC1-201ENST00000265806 DUOX2Q9NRD8 1548 aa35.68■■■■□ 3.3
R3HCC1-201ENST00000265806 PZPP20742 1482 aa35.65■■■■□ 3.3
R3HCC1-201ENST00000265806 INO80Q9ULG1 1556 aaPredicted RBP35.65■■■■□ 3.3
R3HCC1-201ENST00000265806 ZNF518AQ6AHZ1 1483 aa35.63■■■■□ 3.29
R3HCC1-201ENST00000265806 KDM5DQ9BY66 1539 aa35.63■■■■□ 3.29
R3HCC1-201ENST00000265806 SIN3AQ96ST3 1273 aa35.62■■■■□ 3.29
R3HCC1-201ENST00000265806 ATP7AQ04656 1500 aa35.61■■■■□ 3.29
R3HCC1-201ENST00000265806 ERBINQ96RT1 1412 aa35.61■■■■□ 3.29
R3HCC1-201ENST00000265806 FAM69CQ0P6D2 419 aa35.61■■■■□ 3.29
R3HCC1-201ENST00000265806 SLC4A1APQ9BWU0 796 aaKnown RBP35.59■■■■□ 3.29
R3HCC1-201ENST00000265806 TIMELESSQ9UNS1 1208 aa35.59■■■■□ 3.29
R3HCC1-201ENST00000265806 POGZQ7Z3K3 1410 aa35.59■■■■□ 3.29
R3HCC1-201ENST00000265806 KDM5CP41229 1560 aa35.56■■■■□ 3.28
R3HCC1-201ENST00000265806 NUP155O75694 1391 aa35.55■■■■□ 3.28
R3HCC1-201ENST00000265806 UNC13BO14795 1591 aa35.53■■■■□ 3.28
R3HCC1-201ENST00000265806 NEUROD1Q13562 356 aa35.53■■■■□ 3.28
R3HCC1-201ENST00000265806 KIDINS220Q9ULH0 1771 aa35.49■■■■□ 3.27
R3HCC1-201ENST00000265806 ANKRD30BQ9BXX2 1392 aa35.49■■■■□ 3.27
R3HCC1-201ENST00000265806 MLH3Q9UHC1 1453 aa35.48■■■■□ 3.27
R3HCC1-201ENST00000265806 MAGI2Q86UL8 1455 aa35.45■■■■□ 3.27
R3HCC1-201ENST00000265806 PPRC1Q5VV67 1664 aaKnown RBP35.44■■■■□ 3.26
R3HCC1-201ENST00000265806 FOXD1Q16676 465 aa35.43■■■■□ 3.26
R3HCC1-201ENST00000265806 KIF13AQ9H1H9 1805 aa35.43■■■■□ 3.26
R3HCC1-201ENST00000265806 TEX14Q8IWB6 1497 aa35.43■■■■□ 3.26
R3HCC1-201ENST00000265806 HECW2Q9P2P5 1572 aa35.42■■■■□ 3.26
R3HCC1-201ENST00000265806 FAM135AQ9P2D6 1515 aa35.42■■■■□ 3.26
R3HCC1-201ENST00000265806 DHX29Q7Z478 1369 aaKnown RBP35.41■■■■□ 3.26
R3HCC1-201ENST00000265806 PKD2Q13563 968 aa35.41■■■■□ 3.26
R3HCC1-201ENST00000265806 MYT1LQ9UL68 1186 aa35.41■■■■□ 3.26
R3HCC1-201ENST00000265806 RICTORQ6R327 1708 aa35.39■■■■□ 3.26
R3HCC1-201ENST00000265806 IQGAP3Q86VI3 1631 aa35.38■■■■□ 3.25
R3HCC1-201ENST00000265806 TONSLQ96HA7 1378 aa35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms