RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SSR3-201ENST00000265044 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
SSR3-201ENST00000265044 ACIN1Q9UKV3 1341 aaKnown RBP13.17□□□□□ -0.3
SSR3-201ENST00000265044 PKD2Q13563 968 aa13.17□□□□□ -0.3
SSR3-201ENST00000265044 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
SSR3-201ENST00000265044 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
SSR3-201ENST00000265044 NUP155O75694 1391 aa13.16□□□□□ -0.3
SSR3-201ENST00000265044 PTPN23Q9H3S7 1636 aa13.14□□□□□ -0.31
SSR3-201ENST00000265044 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
SSR3-201ENST00000265044 CHD1O14646 1710 aa13.14□□□□□ -0.31
SSR3-201ENST00000265044 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
SSR3-201ENST00000265044 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
SSR3-201ENST00000265044 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
SSR3-201ENST00000265044 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
SSR3-201ENST00000265044 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
SSR3-201ENST00000265044 NAIPQ13075 1403 aa13.12□□□□□ -0.31
SSR3-201ENST00000265044 DAPK1P53355 1430 aa13.11□□□□□ -0.31
SSR3-201ENST00000265044 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
SSR3-201ENST00000265044 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
SSR3-201ENST00000265044 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
SSR3-201ENST00000265044 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
SSR3-201ENST00000265044 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
SSR3-201ENST00000265044 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
SSR3-201ENST00000265044 ABCC5O15440 1437 aa13.09□□□□□ -0.31
SSR3-201ENST00000265044 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
SSR3-201ENST00000265044 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
SSR3-201ENST00000265044 KIF14Q15058 1648 aa13.08□□□□□ -0.32
SSR3-201ENST00000265044 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
SSR3-201ENST00000265044 KIF3BO15066 747 aa13.07□□□□□ -0.32
SSR3-201ENST00000265044 MIER1Q8N108 512 aa13.06□□□□□ -0.32
SSR3-201ENST00000265044 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
SSR3-201ENST00000265044 GGT6Q6P531 493 aa13.06□□□□□ -0.32
SSR3-201ENST00000265044 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
SSR3-201ENST00000265044 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSR3-201ENST00000265044 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
SSR3-201ENST00000265044 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
SSR3-201ENST00000265044 ANP32CO43423 234 aa13.03□□□□□ -0.32
SSR3-201ENST00000265044 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
SSR3-201ENST00000265044 ABCA8O94911 1581 aa13.01□□□□□ -0.33
SSR3-201ENST00000265044 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
SSR3-201ENST00000265044 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
SSR3-201ENST00000265044 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
SSR3-201ENST00000265044 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
SSR3-201ENST00000265044 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
SSR3-201ENST00000265044 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
SSR3-201ENST00000265044 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
SSR3-201ENST00000265044 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
SSR3-201ENST00000265044 KANK1Q14678 1352 aa12.98□□□□□ -0.33
SSR3-201ENST00000265044 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
SSR3-201ENST00000265044 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
SSR3-201ENST00000265044 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
SSR3-201ENST00000265044 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
SSR3-201ENST00000265044 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
SSR3-201ENST00000265044 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
SSR3-201ENST00000265044 MLECQ14165 292 aa12.96□□□□□ -0.33
SSR3-201ENST00000265044 ASXL2Q76L83 1435 aa12.96□□□□□ -0.33
SSR3-201ENST00000265044 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.33
SSR3-201ENST00000265044 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
SSR3-201ENST00000265044 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
SSR3-201ENST00000265044 ITSN2Q9NZM3 1697 aa12.95□□□□□ -0.34
SSR3-201ENST00000265044 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
SSR3-201ENST00000265044 PLCH2O75038 1416 aa12.94□□□□□ -0.34
SSR3-201ENST00000265044 CD109Q6YHK3 1445 aa12.93□□□□□ -0.34
SSR3-201ENST00000265044 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
SSR3-201ENST00000265044 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
SSR3-201ENST00000265044 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
SSR3-201ENST00000265044 FANCAO15360 1455 aa12.91□□□□□ -0.34
SSR3-201ENST00000265044 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
SSR3-201ENST00000265044 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
SSR3-201ENST00000265044 ABCC10Q5T3U5 1492 aa12.9□□□□□ -0.34
SSR3-201ENST00000265044 BCANQ96GW7 911 aa12.89□□□□□ -0.35
SSR3-201ENST00000265044 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
SSR3-201ENST00000265044 ADGRL1O94910 1474 aa12.89□□□□□ -0.35
SSR3-201ENST00000265044 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
SSR3-201ENST00000265044 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
SSR3-201ENST00000265044 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
SSR3-201ENST00000265044 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
SSR3-201ENST00000265044 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
SSR3-201ENST00000265044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.354e-16■■□□□ 13.7
SSR3-201ENST00000265044 UHRF1BP1LA0JNW5 1464 aa12.86□□□□□ -0.35
SSR3-201ENST00000265044 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
SSR3-201ENST00000265044 SHROOM2Q13796 1616 aa12.83□□□□□ -0.35
SSR3-201ENST00000265044 ZCCHC11Q5TAX3 1644 aaKnown RBP12.83□□□□□ -0.36
SSR3-201ENST00000265044 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
SSR3-201ENST00000265044 TTC37Q6PGP7 1564 aa12.82□□□□□ -0.36
SSR3-201ENST00000265044 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
SSR3-201ENST00000265044 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
SSR3-201ENST00000265044 KDM6BO15054 1643 aa12.79□□□□□ -0.36
SSR3-201ENST00000265044 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
SSR3-201ENST00000265044 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
SSR3-201ENST00000265044 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
SSR3-201ENST00000265044 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
SSR3-201ENST00000265044 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
SSR3-201ENST00000265044 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
SSR3-201ENST00000265044 ADCY10Q96PN6 1610 aa12.77□□□□□ -0.37
SSR3-201ENST00000265044 MYO5CQ9NQX4 1742 aa12.77□□□□□ -0.37
SSR3-201ENST00000265044 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
SSR3-201ENST00000265044 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
SSR3-201ENST00000265044 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
SSR3-201ENST00000265044 USP47Q96K76 1375 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms