RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 RASSF8Q8NHQ8 419 aa18.85■□□□□ 0.61
CUL3-201ENST00000264414 TMX4Q9H1E5 349 aaPredicted RBP18.84■□□□□ 0.61
CUL3-201ENST00000264414 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
CUL3-201ENST00000264414 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
CUL3-201ENST00000264414 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
CUL3-201ENST00000264414 PES1O00541 588 aaKnown RBP18.79■□□□□ 0.6
CUL3-201ENST00000264414 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
CUL3-201ENST00000264414 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
CUL3-201ENST00000264414 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
CUL3-201ENST00000264414 FOXD4L4Q8WXT5 416 aaPredicted RBP18.78■□□□□ 0.6
CUL3-201ENST00000264414 GORABQ5T7V8 394 aa18.78■□□□□ 0.6
CUL3-201ENST00000264414 STK26Q9P289 416 aa18.77■□□□□ 0.6
CUL3-201ENST00000264414 CEP89Q96ST8 783 aa18.76■□□□□ 0.59
CUL3-201ENST00000264414 GOLGA6L1Q8N7Z2 621 aa18.75■□□□□ 0.59
CUL3-201ENST00000264414 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
CUL3-201ENST00000264414 TAF7LQ5H9L4 462 aa18.74■□□□□ 0.59
CUL3-201ENST00000264414 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
CUL3-201ENST00000264414 MARCH6O60337 910 aa18.74■□□□□ 0.59
CUL3-201ENST00000264414 RAD21O60216 631 aa18.74■□□□□ 0.59
CUL3-201ENST00000264414 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
CUL3-201ENST00000264414 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
CUL3-201ENST00000264414 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
CUL3-201ENST00000264414 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
CUL3-201ENST00000264414 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
CUL3-201ENST00000264414 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
CUL3-201ENST00000264414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.67■□□□□ 0.58
CUL3-201ENST00000264414 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
CUL3-201ENST00000264414 CCAR2Q8N163 923 aaKnown RBP18.67■□□□□ 0.58
CUL3-201ENST00000264414 TPM4P67936 248 aa18.67■□□□□ 0.58
CUL3-201ENST00000264414 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
CUL3-201ENST00000264414 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
CUL3-201ENST00000264414 MSH5O43196 834 aa18.66■□□□□ 0.58
CUL3-201ENST00000264414 ITPRIPQ8IWB1 547 aa18.65■□□□□ 0.58
CUL3-201ENST00000264414 FOXD4L6Q3SYB3 417 aaPredicted RBP18.64■□□□□ 0.58
CUL3-201ENST00000264414 FOXD4L3Q6VB84 417 aaPredicted RBP18.64■□□□□ 0.58
CUL3-201ENST00000264414 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
CUL3-201ENST00000264414 MS4A1P11836 297 aa18.62■□□□□ 0.57
CUL3-201ENST00000264414 MFAP1P55081 439 aaKnown RBP18.62■□□□□ 0.57
CUL3-201ENST00000264414 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
CUL3-201ENST00000264414 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
CUL3-201ENST00000264414 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
CUL3-201ENST00000264414 KLHL34Q8N239 644 aa18.6■□□□□ 0.57
CUL3-201ENST00000264414 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
CUL3-201ENST00000264414 TPD52L1Q16890 204 aaPredicted RBP18.59■□□□□ 0.57
CUL3-201ENST00000264414 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
CUL3-201ENST00000264414 SIN3AQ96ST3 1273 aa18.59■□□□□ 0.57
CUL3-201ENST00000264414 CFDP1Q9UEE9 299 aaPredicted RBP18.58■□□□□ 0.57
CUL3-201ENST00000264414 TPM3P06753 285 aa18.58■□□□□ 0.56
CUL3-201ENST00000264414 LTV1Q96GA3 475 aaPredicted RBP18.57■□□□□ 0.56
CUL3-201ENST00000264414 PTMSP20962 102 aa18.57■□□□□ 0.56
CUL3-201ENST00000264414 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
CUL3-201ENST00000264414 FBXW7Q969H0 707 aa18.55■□□□□ 0.56
CUL3-201ENST00000264414 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
CUL3-201ENST00000264414 TCEAL9Q9UHQ7 104 aa18.54■□□□□ 0.56
CUL3-201ENST00000264414 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
CUL3-201ENST00000264414 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
CUL3-201ENST00000264414 SF3A1Q15459 793 aaKnown RBP18.52■□□□□ 0.56
CUL3-201ENST00000264414 SETQ01105 290 aaPredicted RBP18.52■□□□□ 0.55
CUL3-201ENST00000264414 CLIP1P30622 1438 aa18.5■□□□□ 0.55
CUL3-201ENST00000264414 PCMTD1Q96MG8 357 aaPredicted RBP18.5■□□□□ 0.55
CUL3-201ENST00000264414 NUTM2DQ5VT03 806 aaPredicted RBP18.49■□□□□ 0.55
CUL3-201ENST00000264414 TMF1P82094 1093 aa18.49■□□□□ 0.55
CUL3-201ENST00000264414 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
CUL3-201ENST00000264414 NGEFQ8N5V2 710 aa18.49■□□□□ 0.55
CUL3-201ENST00000264414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.559e-7■■■■■ 98.1
CUL3-201ENST00000264414 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
CUL3-201ENST00000264414 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
CUL3-201ENST00000264414 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
CUL3-201ENST00000264414 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
CUL3-201ENST00000264414 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
CUL3-201ENST00000264414 ZNF592Q92610 1267 aa18.48■□□□□ 0.55
CUL3-201ENST00000264414 GGT6Q6P531 493 aa18.47■□□□□ 0.55
CUL3-201ENST00000264414 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
CUL3-201ENST00000264414 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
CUL3-201ENST00000264414 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
CUL3-201ENST00000264414 H3BQV1 296 aa18.44■□□□□ 0.54
CUL3-201ENST00000264414 IFFO2Q5TF58 517 aa18.44■□□□□ 0.54
CUL3-201ENST00000264414 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
CUL3-201ENST00000264414 GOLGA6L3A6NEY3 463 aa18.43■□□□□ 0.54
CUL3-201ENST00000264414 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
CUL3-201ENST00000264414 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
CUL3-201ENST00000264414 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
CUL3-201ENST00000264414 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
CUL3-201ENST00000264414 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
CUL3-201ENST00000264414 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
CUL3-201ENST00000264414 FOSBP53539 338 aa18.41■□□□□ 0.54
CUL3-201ENST00000264414 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
CUL3-201ENST00000264414 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
CUL3-201ENST00000264414 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
CUL3-201ENST00000264414 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
CUL3-201ENST00000264414 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
CUL3-201ENST00000264414 RRP12Q5JTH9 1297 aaKnown RBP18.39■□□□□ 0.54
CUL3-201ENST00000264414 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
CUL3-201ENST00000264414 KDM4AO75164 1064 aa18.38■□□□□ 0.53
CUL3-201ENST00000264414 SKIDA1Q1XH10 827 aa18.38■□□□□ 0.53
CUL3-201ENST00000264414 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
CUL3-201ENST00000264414 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
CUL3-201ENST00000264414 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
CUL3-201ENST00000264414 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
CUL3-201ENST00000264414 FOXD1Q16676 465 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms