RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 MADDQ8WXG6 1647 aa32.67■■■□□ 2.82
CKLF-201ENST00000264001 PTPRMP28827 1452 aa32.64■■■□□ 2.82
CKLF-201ENST00000264001 EFCAB2Q5VUJ9 269 aa32.64■■■□□ 2.82
CKLF-201ENST00000264001 SCAPERQ9BY12 1400 aa32.63■■■□□ 2.81
CKLF-201ENST00000264001 ZFYVE16Q7Z3T8 1539 aa32.61■■■□□ 2.81
CKLF-201ENST00000264001 ARHGAP5Q13017 1502 aa32.58■■■□□ 2.81
CKLF-201ENST00000264001 RIMS1Q86UR5 1692 aaKnown RBP32.58■■■□□ 2.81
CKLF-201ENST00000264001 POGZQ7Z3K3 1410 aa32.58■■■□□ 2.81
CKLF-201ENST00000264001 CDC42BPBQ9Y5S2 1711 aa32.56■■■□□ 2.8
CKLF-201ENST00000264001 MAGI2Q86UL8 1455 aa32.55■■■□□ 2.8
CKLF-201ENST00000264001 ARID4BQ4LE39 1312 aaPredicted RBP32.55■■■□□ 2.8
CKLF-201ENST00000264001 SIGLEC1Q9BZZ2 1709 aa32.53■■■□□ 2.8
CKLF-201ENST00000264001 CEP162Q5TB80 1403 aa32.52■■■□□ 2.8
CKLF-201ENST00000264001 YEATS2Q9ULM3 1422 aa32.52■■■□□ 2.8
CKLF-201ENST00000264001 PREX2Q70Z35 1606 aa32.51■■■□□ 2.8
CKLF-201ENST00000264001 CDC42BPAQ5VT25 1732 aa32.47■■■□□ 2.79
CKLF-201ENST00000264001 FER1L4A9Z1Z3 1794 aa32.46■■■□□ 2.79
CKLF-201ENST00000264001 ZNF518AQ6AHZ1 1483 aa32.44■■■□□ 2.78
CKLF-201ENST00000264001 KDM5CP41229 1560 aa32.4■■■□□ 2.78
CKLF-201ENST00000264001 LOC105371045A0A1W2PR82 267 aa32.39■■■□□ 2.78
CKLF-201ENST00000264001 AFAP1Q8N556 730 aa32.39■■■□□ 2.78
CKLF-201ENST00000264001 ABCC1P33527 1531 aa32.38■■■□□ 2.77
CKLF-201ENST00000264001 ILDR1Q86SU0 546 aaPredicted RBP32.38■■■□□ 2.77
CKLF-201ENST00000264001 ATP10AO60312 1499 aa32.36■■■□□ 2.77
CKLF-201ENST00000264001 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
CKLF-201ENST00000264001 LMTK3Q96Q04 1460 aa32.35■■■□□ 2.77
CKLF-201ENST00000264001 C9orf84Q5VXU9 1444 aa32.35■■■□□ 2.77
CKLF-201ENST00000264001 MTUS2Q5JR59 1369 aa32.35■■■□□ 2.77
CKLF-201ENST00000264001 ARHGEF12Q9NZN5 1544 aa32.35■■■□□ 2.77
CKLF-201ENST00000264001 GPATCH8Q9UKJ3 1502 aaKnown RBP32.34■■■□□ 2.77
CKLF-201ENST00000264001 TRAPPC8Q9Y2L5 1435 aa32.32■■■□□ 2.76
CKLF-201ENST00000264001 MYT1LQ9UL68 1186 aa32.3■■■□□ 2.76
CKLF-201ENST00000264001 SAMD9LQ8IVG5 1584 aa32.28■■■□□ 2.76
CKLF-201ENST00000264001 MLECQ14165 292 aa32.28■■■□□ 2.76
CKLF-201ENST00000264001 ZNF777Q9ULD5 760 aaPredicted RBP32.28■■■□□ 2.76
CKLF-201ENST00000264001 EHBP1L1Q8N3D4 1523 aa32.27■■■□□ 2.76
CKLF-201ENST00000264001 MLH3Q9UHC1 1453 aa32.27■■■□□ 2.76
CKLF-201ENST00000264001 CCNB3Q8WWL7 1395 aa32.26■■■□□ 2.75
CKLF-201ENST00000264001 DIP2CQ9Y2E4 1556 aa32.26■■■□□ 2.75
CKLF-201ENST00000264001 REREQ9P2R6 1566 aa32.24■■■□□ 2.75
CKLF-201ENST00000264001 ABCA6Q8N139 1617 aa32.23■■■□□ 2.75
CKLF-201ENST00000264001 CFDP1Q9UEE9 299 aaPredicted RBP32.22■■■□□ 2.75
CKLF-201ENST00000264001 SYCP2Q9BX26 1530 aa32.21■■■□□ 2.75
CKLF-201ENST00000264001 KIDINS220Q9ULH0 1771 aa32.19■■■□□ 2.74
CKLF-201ENST00000264001 TIAM1Q13009 1591 aa32.18■■■□□ 2.74
CKLF-201ENST00000264001 PREX1Q8TCU6 1659 aa32.18■■■□□ 2.74
CKLF-201ENST00000264001 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
CKLF-201ENST00000264001 HNRNPMP52272 730 aaKnown RBP eCLIP32.16■■■□□ 2.74
CKLF-201ENST00000264001 PLEKHH2Q8IVE3 1493 aa32.16■■■□□ 2.74
CKLF-201ENST00000264001 KIAA1107Q9UPP5 1409 aa32.15■■■□□ 2.74
CKLF-201ENST00000264001 PLPPR3Q6T4P5 718 aa32.14■■■□□ 2.74
CKLF-201ENST00000264001 SUPT6HQ7KZ85 1726 aaKnown RBP32.1■■■□□ 2.73
CKLF-201ENST00000264001 SPAG9O60271 1321 aaKnown RBP32.08■■■□□ 2.73
CKLF-201ENST00000264001 AGLP35573 1532 aa32.08■■■□□ 2.73
CKLF-201ENST00000264001 NCOA2Q15596 1464 aa32.07■■■□□ 2.72
CKLF-201ENST00000264001 ZNF644Q9H582 1327 aaPredicted RBP32.05■■■□□ 2.72
CKLF-201ENST00000264001 ATP7AQ04656 1500 aa32.03■■■□□ 2.72
CKLF-201ENST00000264001 INO80Q9ULG1 1556 aaPredicted RBP32.02■■■□□ 2.72
CKLF-201ENST00000264001 C3P01024 1663 aa32.02■■■□□ 2.72
CKLF-201ENST00000264001 HSPA2P54652 639 aa32.02■■■□□ 2.72
CKLF-201ENST00000264001 SETD1BQ9UPS6 1966 aaKnown RBP32.01■■■□□ 2.71
CKLF-201ENST00000264001 LRRC9Q6ZRR7 1453 aa32■■■□□ 2.71
CKLF-201ENST00000264001 MBD5Q9P267 1494 aa31.98■■■□□ 2.71
CKLF-201ENST00000264001 CEBPAP49715 358 aaPredicted RBP31.97■■■□□ 2.71
CKLF-201ENST00000264001 FBXO41Q8TF61 875 aa31.96■■■□□ 2.71
CKLF-201ENST00000264001 MAP3K1Q13233 1512 aa31.95■■■□□ 2.71
CKLF-201ENST00000264001 UHRF1BP1Q6BDS2 1440 aa31.92■■■□□ 2.7
CKLF-201ENST00000264001 CAMSAP2Q08AD1 1489 aa31.91■■■□□ 2.7
CKLF-201ENST00000264001 KANK4Q5T7N3 995 aaPredicted RBP31.91■■■□□ 2.7
CKLF-201ENST00000264001 ESF1Q9H501 851 aaKnown RBP31.91■■■□□ 2.7
CKLF-201ENST00000264001 MROH2AA6NES4 1674 aa31.91■■■□□ 2.7
CKLF-201ENST00000264001 A2MP01023 1474 aa31.91■■■□□ 2.7
CKLF-201ENST00000264001 PLXNC1O60486 1568 aa31.9■■■□□ 2.7
CKLF-201ENST00000264001 ADGBQ8N7X0 1667 aa31.89■■■□□ 2.7
CKLF-201ENST00000264001 CNTLNQ9NXG0 1405 aa31.88■■■□□ 2.69
CKLF-201ENST00000264001 STRCQ7RTU9 1775 aa31.86■■■□□ 2.69
CKLF-201ENST00000264001 RTEL1-TNFRSF6BF6WH68 1400 aa31.86■■■□□ 2.69
CKLF-201ENST00000264001 CCDC141Q6ZP82 1450 aa31.85■■■□□ 2.69
CKLF-201ENST00000264001 RSPH4AQ5TD94 716 aa31.82■■■□□ 2.68
CKLF-201ENST00000264001 ARHGEF5Q12774 1597 aa31.79■■■□□ 2.68
CKLF-201ENST00000264001 CLTCQ00610 1675 aaKnown RBP31.77■■■□□ 2.68
CKLF-201ENST00000264001 APLP2Q06481 763 aa31.77■■■□□ 2.68
CKLF-201ENST00000264001 MYOM3Q5VTT5 1437 aa31.75■■■□□ 2.67
CKLF-201ENST00000264001 DHX29Q7Z478 1369 aaKnown RBP31.74■■■□□ 2.67
CKLF-201ENST00000264001 GGT6Q6P531 493 aa31.74■■■□□ 2.67
CKLF-201ENST00000264001 MIA2Q96PC5 1412 aa31.72■■■□□ 2.67
CKLF-201ENST00000264001 ZMYM3Q14202 1370 aa31.71■■■□□ 2.67
CKLF-201ENST00000264001 NPATQ14207 1427 aa31.71■■■□□ 2.67
CKLF-201ENST00000264001 TSPY4P0CV99 314 aa31.7■■■□□ 2.67
CKLF-201ENST00000264001 TSPY10P0CW01 314 aa31.7■■■□□ 2.67
CKLF-201ENST00000264001 ZNF142P52746 1687 aaPredicted RBP31.67■■■□□ 2.66
CKLF-201ENST00000264001 PPP6R1Q9UPN7 881 aa31.66■■■□□ 2.66
CKLF-201ENST00000264001 DMRT2Q9Y5R5 561 aa31.66■■■□□ 2.66
CKLF-201ENST00000264001 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
CKLF-201ENST00000264001 CERKQ8TCT0 537 aa31.64■■■□□ 2.66
CKLF-201ENST00000264001 MAST1Q9Y2H9 1570 aa31.64■■■□□ 2.65
CKLF-201ENST00000264001 KIF3BO15066 747 aa31.63■■■□□ 2.65
CKLF-201ENST00000264001 PTPRTO14522 1441 aa31.61■■■□□ 2.65
CKLF-201ENST00000264001 NCOA1Q15788 1441 aa31.59■■■□□ 2.65
CKLF-201ENST00000264001 CAMSAP1Q5T5Y3 1602 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms