RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 SOX12O15370 315 aa20.92■□□□□ 0.94
USP13-201ENST00000263966 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
USP13-201ENST00000263966 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
USP13-201ENST00000263966 VPS53Q5VIR6 699 aa20.89■□□□□ 0.94
USP13-201ENST00000263966 RASSF8Q8NHQ8 419 aa20.87■□□□□ 0.93
USP13-201ENST00000263966 MSNP26038 577 aaKnown RBP20.87■□□□□ 0.93
USP13-201ENST00000263966 GTF2E1P29083 439 aaPredicted RBP20.87■□□□□ 0.93
USP13-201ENST00000263966 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
USP13-201ENST00000263966 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
USP13-201ENST00000263966 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
USP13-201ENST00000263966 GOLGA6L1Q8N7Z2 621 aa20.84■□□□□ 0.93
USP13-201ENST00000263966 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
USP13-201ENST00000263966 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
USP13-201ENST00000263966 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
USP13-201ENST00000263966 MARCH6O60337 910 aa20.83■□□□□ 0.92
USP13-201ENST00000263966 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
USP13-201ENST00000263966 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
USP13-201ENST00000263966 PTMSP20962 102 aa20.82■□□□□ 0.92
USP13-201ENST00000263966 CWC22Q9HCG8 908 aaKnown RBP20.81■□□□□ 0.92
USP13-201ENST00000263966 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
USP13-201ENST00000263966 TMF1P82094 1093 aa20.8■□□□□ 0.92
USP13-201ENST00000263966 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
USP13-201ENST00000263966 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
USP13-201ENST00000263966 MEX3CQ5U5Q3 659 aaKnown RBP20.77■□□□□ 0.92
USP13-201ENST00000263966 SYAP1Q96A49 352 aaPredicted RBP20.76■□□□□ 0.91
USP13-201ENST00000263966 PDE4CQ08493 712 aa20.76■□□□□ 0.91
USP13-201ENST00000263966 AMOTL1Q8IY63 956 aa20.75■□□□□ 0.91
USP13-201ENST00000263966 ANO8Q9HCE9 1232 aaPredicted RBP20.74■□□□□ 0.91
USP13-201ENST00000263966 RGS3P49796 1198 aa20.74■□□□□ 0.91
USP13-201ENST00000263966 CSPP1Q1MSJ5 1256 aa20.73■□□□□ 0.91
USP13-201ENST00000263966 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
USP13-201ENST00000263966 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
USP13-201ENST00000263966 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
USP13-201ENST00000263966 HSP90B1P14625 803 aaKnown RBP20.72■□□□□ 0.91
USP13-201ENST00000263966 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
USP13-201ENST00000263966 MSH5O43196 834 aa20.7■□□□□ 0.9
USP13-201ENST00000263966 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
USP13-201ENST00000263966 STK31Q9BXU1 1019 aa20.69■□□□□ 0.9
USP13-201ENST00000263966 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
USP13-201ENST00000263966 FOXD1Q16676 465 aa20.68■□□□□ 0.9
USP13-201ENST00000263966 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
USP13-201ENST00000263966 TPM2P07951 284 aa20.67■□□□□ 0.9
USP13-201ENST00000263966 TPM3P06753 285 aa20.67■□□□□ 0.9
USP13-201ENST00000263966 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
USP13-201ENST00000263966 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
USP13-201ENST00000263966 EVA1CP58658 441 aa20.66■□□□□ 0.9
USP13-201ENST00000263966 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
USP13-201ENST00000263966 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
USP13-201ENST00000263966 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
USP13-201ENST00000263966 CREBRFQ8IUR6 639 aa20.64■□□□□ 0.89
USP13-201ENST00000263966 EIF3AQ14152 1382 aaKnown RBP20.64■□□□□ 0.89
USP13-201ENST00000263966 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
USP13-201ENST00000263966 LRRFIP1Q32MZ4 808 aaKnown RBP20.63■□□□□ 0.89
USP13-201ENST00000263966 STK26Q9P289 416 aa20.63■□□□□ 0.89
USP13-201ENST00000263966 SAFB2Q14151 953 aaKnown RBP eCLIP20.62■□□□□ 0.89
USP13-201ENST00000263966 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
USP13-201ENST00000263966 GBP4Q96PP9 640 aa20.61■□□□□ 0.89
USP13-201ENST00000263966 AKAP17AQ02040 695 aaKnown RBP20.61■□□□□ 0.89
USP13-201ENST00000263966 TPD52L1Q16890 204 aaPredicted RBP20.6■□□□□ 0.89
USP13-201ENST00000263966 HMMRO75330 724 aa20.6■□□□□ 0.89
USP13-201ENST00000263966 TOMM22Q9NS69 142 aa20.58■□□□□ 0.89
USP13-201ENST00000263966 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
USP13-201ENST00000263966 CCDC43Q96MW1 224 aaKnown RBP20.57■□□□□ 0.88
USP13-201ENST00000263966 TRIM6-TRIM34B2RNG4 842 aa20.57■□□□□ 0.88
USP13-201ENST00000263966 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 EEA1Q15075 1411 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 PHF14O94880 888 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 APBB1O00213 710 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 GGT6Q6P531 493 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 CCDC70Q6NSX1 233 aa20.56■□□□□ 0.88
USP13-201ENST00000263966 PES1O00541 588 aaKnown RBP20.56■□□□□ 0.88
USP13-201ENST00000263966 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
USP13-201ENST00000263966 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
USP13-201ENST00000263966 TPM1P09493 284 aa20.54■□□□□ 0.88
USP13-201ENST00000263966 SETQ01105 290 aaPredicted RBP20.53■□□□□ 0.88
USP13-201ENST00000263966 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
USP13-201ENST00000263966 CARMIL2Q6F5E8 1435 aa20.52■□□□□ 0.88
USP13-201ENST00000263966 AMPHP49418 695 aa20.52■□□□□ 0.88
USP13-201ENST00000263966 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
USP13-201ENST00000263966 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
USP13-201ENST00000263966 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
USP13-201ENST00000263966 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
USP13-201ENST00000263966 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
USP13-201ENST00000263966 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
USP13-201ENST00000263966 SF3A1Q15459 793 aaKnown RBP20.5■□□□□ 0.87
USP13-201ENST00000263966 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
USP13-201ENST00000263966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.5■□□□□ 0.872e-6■■■■■ 149.1
USP13-201ENST00000263966 WWC2Q6AWC2 1192 aa20.5■□□□□ 0.87
USP13-201ENST00000263966 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
USP13-201ENST00000263966 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
USP13-201ENST00000263966 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
USP13-201ENST00000263966 RAD21O60216 631 aa20.49■□□□□ 0.87
USP13-201ENST00000263966 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
USP13-201ENST00000263966 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
USP13-201ENST00000263966 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
USP13-201ENST00000263966 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
USP13-201ENST00000263966 CCDC47Q96A33 483 aaKnown RBP20.46■□□□□ 0.87
USP13-201ENST00000263966 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
USP13-201ENST00000263966 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
USP13-201ENST00000263966 ODF2Q5BJF6 829 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms