RNA–Protein interactions for RNA: ENST00000263054.10

SORCS1-201, Transcript of sortilin related VPS10 domain containing receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORCS1, Length 7,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS1-201ENST00000263054 G3V3G9 751 aa18.37■□□□□ 0.53
SORCS1-201ENST00000263054 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
SORCS1-201ENST00000263054 TMF1P82094 1093 aa18.36■□□□□ 0.53
SORCS1-201ENST00000263054 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
SORCS1-201ENST00000263054 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
SORCS1-201ENST00000263054 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SORCS1-201ENST00000263054 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
SORCS1-201ENST00000263054 KANK1Q14678 1352 aa18.33■□□□□ 0.53
SORCS1-201ENST00000263054 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.53
SORCS1-201ENST00000263054 NOL8Q76FK4 1167 aaKnown RBP18.33■□□□□ 0.52
SORCS1-201ENST00000263054 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
SORCS1-201ENST00000263054 TAF7LQ5H9L4 462 aa18.32■□□□□ 0.52
SORCS1-201ENST00000263054 NOP58Q9Y2X3 529 aaKnown RBP18.32■□□□□ 0.52
SORCS1-201ENST00000263054 MCCP23508 829 aa18.31■□□□□ 0.52
SORCS1-201ENST00000263054 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
SORCS1-201ENST00000263054 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
SORCS1-201ENST00000263054 NOC3LQ8WTT2 800 aaKnown RBP18.3■□□□□ 0.52
SORCS1-201ENST00000263054 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
SORCS1-201ENST00000263054 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
SORCS1-201ENST00000263054 FBXO3Q9UK99 471 aa18.29■□□□□ 0.52
SORCS1-201ENST00000263054 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
SORCS1-201ENST00000263054 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
SORCS1-201ENST00000263054 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
SORCS1-201ENST00000263054 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
SORCS1-201ENST00000263054 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
SORCS1-201ENST00000263054 WWC1Q8IX03 1113 aa18.28■□□□□ 0.52
SORCS1-201ENST00000263054 TRIM6-TRIM34B2RNG4 842 aa18.27■□□□□ 0.52
SORCS1-201ENST00000263054 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
SORCS1-201ENST00000263054 MSNP26038 577 aaKnown RBP18.26■□□□□ 0.51
SORCS1-201ENST00000263054 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
SORCS1-201ENST00000263054 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
SORCS1-201ENST00000263054 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
SORCS1-201ENST00000263054 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
SORCS1-201ENST00000263054 MSH5O43196 834 aa18.25■□□□□ 0.51
SORCS1-201ENST00000263054 NRDCO43847 1150 aa18.25■□□□□ 0.51
SORCS1-201ENST00000263054 FOXD4L5Q5VV16 416 aaPredicted RBP18.25■□□□□ 0.51
SORCS1-201ENST00000263054 FOXD4L4Q8WXT5 416 aaPredicted RBP18.25■□□□□ 0.51
SORCS1-201ENST00000263054 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
SORCS1-201ENST00000263054 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
SORCS1-201ENST00000263054 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
SORCS1-201ENST00000263054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
SORCS1-201ENST00000263054 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
SORCS1-201ENST00000263054 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
SORCS1-201ENST00000263054 MS4A1P11836 297 aa18.21■□□□□ 0.51
SORCS1-201ENST00000263054 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
SORCS1-201ENST00000263054 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
SORCS1-201ENST00000263054 NGEFQ8N5V2 710 aa18.2■□□□□ 0.5
SORCS1-201ENST00000263054 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
SORCS1-201ENST00000263054 RAD21O60216 631 aa18.19■□□□□ 0.5
SORCS1-201ENST00000263054 RASSF8Q8NHQ8 419 aa18.18■□□□□ 0.5
SORCS1-201ENST00000263054 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
SORCS1-201ENST00000263054 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
SORCS1-201ENST00000263054 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
SORCS1-201ENST00000263054 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
SORCS1-201ENST00000263054 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
SORCS1-201ENST00000263054 PKD2Q13563 968 aa18.15■□□□□ 0.5
SORCS1-201ENST00000263054 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
SORCS1-201ENST00000263054 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
SORCS1-201ENST00000263054 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
SORCS1-201ENST00000263054 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
SORCS1-201ENST00000263054 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.5
SORCS1-201ENST00000263054 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
SORCS1-201ENST00000263054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
SORCS1-201ENST00000263054 AMPHP49418 695 aa18.11■□□□□ 0.49
SORCS1-201ENST00000263054 EVA1CP58658 441 aa18.11■□□□□ 0.49
SORCS1-201ENST00000263054 PES1O00541 588 aaKnown RBP18.11■□□□□ 0.49
SORCS1-201ENST00000263054 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
SORCS1-201ENST00000263054 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
SORCS1-201ENST00000263054 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
SORCS1-201ENST00000263054 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
SORCS1-201ENST00000263054 MARCH6O60337 910 aa18.09■□□□□ 0.49
SORCS1-201ENST00000263054 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
SORCS1-201ENST00000263054 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
SORCS1-201ENST00000263054 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
SORCS1-201ENST00000263054 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.49
SORCS1-201ENST00000263054 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
SORCS1-201ENST00000263054 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
SORCS1-201ENST00000263054 KTN1Q86UP2 1357 aaKnown RBP18.07■□□□□ 0.48
SORCS1-201ENST00000263054 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
SORCS1-201ENST00000263054 IPO8O15397 1037 aaKnown RBP18.07■□□□□ 0.48
SORCS1-201ENST00000263054 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
SORCS1-201ENST00000263054 DEKP35659 375 aaKnown RBP18.06■□□□□ 0.48
SORCS1-201ENST00000263054 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
SORCS1-201ENST00000263054 CUX2O14529 1486 aa18.05■□□□□ 0.48
SORCS1-201ENST00000263054 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
SORCS1-201ENST00000263054 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
SORCS1-201ENST00000263054 KIF3BO15066 747 aa18.05■□□□□ 0.48
SORCS1-201ENST00000263054 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
SORCS1-201ENST00000263054 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
SORCS1-201ENST00000263054 TRAK1Q9UPV9 953 aa18.03■□□□□ 0.48
SORCS1-201ENST00000263054 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
SORCS1-201ENST00000263054 EID1Q9Y6B2 187 aa18.02■□□□□ 0.48
SORCS1-201ENST00000263054 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
SORCS1-201ENST00000263054 ABCC8Q09428 1581 aa18■□□□□ 0.47
SORCS1-201ENST00000263054 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
SORCS1-201ENST00000263054 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
SORCS1-201ENST00000263054 EEA1Q15075 1411 aa17.98■□□□□ 0.47
SORCS1-201ENST00000263054 NUP155O75694 1391 aa17.97■□□□□ 0.47
SORCS1-201ENST00000263054 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
SORCS1-201ENST00000263054 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms