RNA–Protein interactions for RNA: ENST00000262844.9

AMMECR1-201, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AMMECR1, Length 5,504 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-201ENST00000262844 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
AMMECR1-201ENST00000262844 PTPRGP23470 1445 aa22.61■■□□□ 1.21
AMMECR1-201ENST00000262844 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
AMMECR1-201ENST00000262844 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
AMMECR1-201ENST00000262844 ANP32BQ92688 251 aaKnown RBP22.59■■□□□ 1.21
AMMECR1-201ENST00000262844 NCOA2Q15596 1464 aa22.58■■□□□ 1.21
AMMECR1-201ENST00000262844 ROCK2O75116 1388 aaKnown RBP22.58■■□□□ 1.21
AMMECR1-201ENST00000262844 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.21
AMMECR1-201ENST00000262844 CFAP53Q96M91 514 aa22.58■■□□□ 1.2
AMMECR1-201ENST00000262844 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
AMMECR1-201ENST00000262844 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
AMMECR1-201ENST00000262844 TIAM1Q13009 1591 aa22.51■■□□□ 1.19
AMMECR1-201ENST00000262844 GGT6Q6P531 493 aa22.5■■□□□ 1.19
AMMECR1-201ENST00000262844 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
AMMECR1-201ENST00000262844 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
AMMECR1-201ENST00000262844 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
AMMECR1-201ENST00000262844 KTN1Q86UP2 1357 aaKnown RBP22.49■■□□□ 1.19
AMMECR1-201ENST00000262844 RALBP1Q15311 655 aa22.48■■□□□ 1.19
AMMECR1-201ENST00000262844 POGKQ9P215 609 aa22.47■■□□□ 1.19
AMMECR1-201ENST00000262844 KIF3BO15066 747 aa22.46■■□□□ 1.19
AMMECR1-201ENST00000262844 B4GALNT3Q6L9W6 998 aa22.44■■□□□ 1.18
AMMECR1-201ENST00000262844 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
AMMECR1-201ENST00000262844 ARID4BQ4LE39 1312 aaPredicted RBP22.43■■□□□ 1.18
AMMECR1-201ENST00000262844 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
AMMECR1-201ENST00000262844 NEUROD2Q15784 382 aa22.42■■□□□ 1.18
AMMECR1-201ENST00000262844 TNNT2P45379 298 aaPredicted RBP22.42■■□□□ 1.18
AMMECR1-201ENST00000262844 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
AMMECR1-201ENST00000262844 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
AMMECR1-201ENST00000262844 ERICH6BQ5W0A0 696 aa22.39■■□□□ 1.18
AMMECR1-201ENST00000262844 NUDCQ9Y266 331 aa22.39■■□□□ 1.17
AMMECR1-201ENST00000262844 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
AMMECR1-201ENST00000262844 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.17
AMMECR1-201ENST00000262844 EHBP1L1Q8N3D4 1523 aa22.37■■□□□ 1.17
AMMECR1-201ENST00000262844 PPM1GO15355 546 aaPredicted RBP22.36■■□□□ 1.17
AMMECR1-201ENST00000262844 PRKRIP1Q9H875 184 aaPredicted RBP22.36■■□□□ 1.17
AMMECR1-201ENST00000262844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.17
AMMECR1-201ENST00000262844 NBR1Q14596 966 aa22.34■■□□□ 1.17
AMMECR1-201ENST00000262844 USP47Q96K76 1375 aa22.34■■□□□ 1.17
AMMECR1-201ENST00000262844 MYH16Q9H6N6 1097 aa22.33■■□□□ 1.17
AMMECR1-201ENST00000262844 MORC1Q86VD1 984 aa22.33■■□□□ 1.16
AMMECR1-201ENST00000262844 MIA2Q96PC5 1412 aa22.33■■□□□ 1.16
AMMECR1-201ENST00000262844 MAPK8IP3Q9UPT6 1336 aa22.33■■□□□ 1.16
AMMECR1-201ENST00000262844 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
AMMECR1-201ENST00000262844 EIF5BO60841 1220 aaKnown RBP22.32■■□□□ 1.16
AMMECR1-201ENST00000262844 NLRP13Q86W25 1043 aa22.31■■□□□ 1.16
AMMECR1-201ENST00000262844 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
AMMECR1-201ENST00000262844 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
AMMECR1-201ENST00000262844 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
AMMECR1-201ENST00000262844 MAP3K1Q13233 1512 aa22.3■■□□□ 1.16
AMMECR1-201ENST00000262844 EIF3AQ14152 1382 aaKnown RBP22.3■■□□□ 1.16
AMMECR1-201ENST00000262844 SRPK2P78362 688 aaKnown RBP22.29■■□□□ 1.16
AMMECR1-201ENST00000262844 CUL7Q14999 1698 aa22.28■■□□□ 1.16
AMMECR1-201ENST00000262844 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.16
AMMECR1-201ENST00000262844 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
AMMECR1-201ENST00000262844 MLECQ14165 292 aa22.27■■□□□ 1.16
AMMECR1-201ENST00000262844 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
AMMECR1-201ENST00000262844 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
AMMECR1-201ENST00000262844 HECW1Q76N89 1606 aa22.26■■□□□ 1.15
AMMECR1-201ENST00000262844 DDRGK1Q96HY6 314 aa22.26■■□□□ 1.15
AMMECR1-201ENST00000262844 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
AMMECR1-201ENST00000262844 FRAT1Q92837 279 aaPredicted RBP22.24■■□□□ 1.15
AMMECR1-201ENST00000262844 STK26Q9P289 416 aa22.24■■□□□ 1.15
AMMECR1-201ENST00000262844 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
AMMECR1-201ENST00000262844 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
AMMECR1-201ENST00000262844 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
AMMECR1-201ENST00000262844 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
AMMECR1-201ENST00000262844 ANP32EQ9BTT0 268 aa22.23■■□□□ 1.15
AMMECR1-201ENST00000262844 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
AMMECR1-201ENST00000262844 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
AMMECR1-201ENST00000262844 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
AMMECR1-201ENST00000262844 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
AMMECR1-201ENST00000262844 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
AMMECR1-201ENST00000262844 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
AMMECR1-201ENST00000262844 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
AMMECR1-201ENST00000262844 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
AMMECR1-201ENST00000262844 SUPT6HQ7KZ85 1726 aaKnown RBP22.21■■□□□ 1.15
AMMECR1-201ENST00000262844 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.15
AMMECR1-201ENST00000262844 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
AMMECR1-201ENST00000262844 ARXQ96QS3 562 aa22.19■■□□□ 1.14
AMMECR1-201ENST00000262844 PANK3Q9H999 370 aa22.19■■□□□ 1.14
AMMECR1-201ENST00000262844 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
AMMECR1-201ENST00000262844 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
AMMECR1-201ENST00000262844 LAS1LQ9Y4W2 734 aaKnown RBP22.17■■□□□ 1.14
AMMECR1-201ENST00000262844 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
AMMECR1-201ENST00000262844 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
AMMECR1-201ENST00000262844 PDE3BQ13370 1112 aa22.17■■□□□ 1.14
AMMECR1-201ENST00000262844 NAIPQ13075 1403 aa22.16■■□□□ 1.14
AMMECR1-201ENST00000262844 RGS3P49796 1198 aa22.16■■□□□ 1.14
AMMECR1-201ENST00000262844 ZBED9Q6R2W3 1325 aa22.15■■□□□ 1.14
AMMECR1-201ENST00000262844 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
AMMECR1-201ENST00000262844 TSHZ2Q9NRE2 1034 aa22.15■■□□□ 1.14
AMMECR1-201ENST00000262844 MS4A1P11836 297 aa22.14■■□□□ 1.14
AMMECR1-201ENST00000262844 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
AMMECR1-201ENST00000262844 BECN1Q14457 450 aa22.14■■□□□ 1.13
AMMECR1-201ENST00000262844 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
AMMECR1-201ENST00000262844 CNTLNQ9NXG0 1405 aa22.13■■□□□ 1.13
AMMECR1-201ENST00000262844 DAPK1P53355 1430 aa22.13■■□□□ 1.13
AMMECR1-201ENST00000262844 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
AMMECR1-201ENST00000262844 TRAK1Q9UPV9 953 aa22.1■■□□□ 1.13
AMMECR1-201ENST00000262844 A0A0G2JS52 829 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms