RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
CALCOCO2-201ENST00000258947 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
CALCOCO2-201ENST00000258947 NAIPQ13075 1403 aa12.41□□□□□ -0.42
CALCOCO2-201ENST00000258947 DAPK1P53355 1430 aa12.38□□□□□ -0.43
CALCOCO2-201ENST00000258947 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
CALCOCO2-201ENST00000258947 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-201ENST00000258947 EFCAB2Q5VUJ9 269 aa12.36□□□□□ -0.43
CALCOCO2-201ENST00000258947 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
CALCOCO2-201ENST00000258947 ABCC5O15440 1437 aa12.36□□□□□ -0.43
CALCOCO2-201ENST00000258947 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
CALCOCO2-201ENST00000258947 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
CALCOCO2-201ENST00000258947 KIF14Q15058 1648 aa12.34□□□□□ -0.43
CALCOCO2-201ENST00000258947 MIER1Q8N108 512 aa12.34□□□□□ -0.43
CALCOCO2-201ENST00000258947 PKD2Q13563 968 aa12.34□□□□□ -0.43
CALCOCO2-201ENST00000258947 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
CALCOCO2-201ENST00000258947 NUP155O75694 1391 aa12.33□□□□□ -0.44
CALCOCO2-201ENST00000258947 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
CALCOCO2-201ENST00000258947 ABCA8O94911 1581 aa12.33□□□□□ -0.44
CALCOCO2-201ENST00000258947 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO2-201ENST00000258947 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
CALCOCO2-201ENST00000258947 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO2-201ENST00000258947 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-201ENST00000258947 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
CALCOCO2-201ENST00000258947 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
CALCOCO2-201ENST00000258947 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
CALCOCO2-201ENST00000258947 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
CALCOCO2-201ENST00000258947 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
CALCOCO2-201ENST00000258947 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
CALCOCO2-201ENST00000258947 ANKRD50Q9ULJ7 1429 aa12.29□□□□□ -0.44
CALCOCO2-201ENST00000258947 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
CALCOCO2-201ENST00000258947 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
CALCOCO2-201ENST00000258947 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
CALCOCO2-201ENST00000258947 AFAP1Q8N556 730 aa12.27□□□□□ -0.44
CALCOCO2-201ENST00000258947 AKNAQ7Z591 1439 aa12.27□□□□□ -0.44
CALCOCO2-201ENST00000258947 ACIN1Q9UKV3 1341 aaKnown RBP12.27□□□□□ -0.44
CALCOCO2-201ENST00000258947 ROCK1Q13464 1354 aa12.27□□□□□ -0.45
CALCOCO2-201ENST00000258947 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
CALCOCO2-201ENST00000258947 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
CALCOCO2-201ENST00000258947 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-201ENST00000258947 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
CALCOCO2-201ENST00000258947 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
CALCOCO2-201ENST00000258947 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
CALCOCO2-201ENST00000258947 ABCC10Q5T3U5 1492 aa12.22□□□□□ -0.45
CALCOCO2-201ENST00000258947 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
CALCOCO2-201ENST00000258947 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
CALCOCO2-201ENST00000258947 KDM6BO15054 1643 aa12.2□□□□□ -0.46
CALCOCO2-201ENST00000258947 KIF3BO15066 747 aa12.19□□□□□ -0.46
CALCOCO2-201ENST00000258947 ANP32CO43423 234 aa12.19□□□□□ -0.46
CALCOCO2-201ENST00000258947 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
CALCOCO2-201ENST00000258947 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
CALCOCO2-201ENST00000258947 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
CALCOCO2-201ENST00000258947 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
CALCOCO2-201ENST00000258947 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
CALCOCO2-201ENST00000258947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
CALCOCO2-201ENST00000258947 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-201ENST00000258947 PLCH2O75038 1416 aa12.17□□□□□ -0.46
CALCOCO2-201ENST00000258947 TTC37Q6PGP7 1564 aa12.16□□□□□ -0.46
CALCOCO2-201ENST00000258947 GGT6Q6P531 493 aa12.16□□□□□ -0.46
CALCOCO2-201ENST00000258947 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
CALCOCO2-201ENST00000258947 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
CALCOCO2-201ENST00000258947 CDC42BPAQ5VT25 1732 aa12.15□□□□□ -0.46
CALCOCO2-201ENST00000258947 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
CALCOCO2-201ENST00000258947 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
CALCOCO2-201ENST00000258947 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
CALCOCO2-201ENST00000258947 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.47
CALCOCO2-201ENST00000258947 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
CALCOCO2-201ENST00000258947 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
CALCOCO2-201ENST00000258947 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
CALCOCO2-201ENST00000258947 CARD11Q9BXL7 1154 aa12.13□□□□□ -0.47
CALCOCO2-201ENST00000258947 UHRF1BP1LA0JNW5 1464 aa12.13□□□□□ -0.47
CALCOCO2-201ENST00000258947 FANCAO15360 1455 aa12.13□□□□□ -0.47
CALCOCO2-201ENST00000258947 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
CALCOCO2-201ENST00000258947 TRAPPC8Q9Y2L5 1435 aa12.13□□□□□ -0.47
CALCOCO2-201ENST00000258947 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
CALCOCO2-201ENST00000258947 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
CALCOCO2-201ENST00000258947 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
CALCOCO2-201ENST00000258947 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
CALCOCO2-201ENST00000258947 CCDC144AA2RUR9 1427 aa12.11□□□□□ -0.47
CALCOCO2-201ENST00000258947 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
CALCOCO2-201ENST00000258947 KANK1Q14678 1352 aa12.11□□□□□ -0.47
CALCOCO2-201ENST00000258947 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO2-201ENST00000258947 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
CALCOCO2-201ENST00000258947 ADGRL2O95490 1459 aa12.1□□□□□ -0.47
CALCOCO2-201ENST00000258947 SHANK2Q9UPX8 1470 aa12.1□□□□□ -0.47
CALCOCO2-201ENST00000258947 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
CALCOCO2-201ENST00000258947 PZPP20742 1482 aa12.09□□□□□ -0.47
CALCOCO2-201ENST00000258947 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.48
CALCOCO2-201ENST00000258947 CDC42BPBQ9Y5S2 1711 aa12.07□□□□□ -0.48
CALCOCO2-201ENST00000258947 RPRD2Q5VT52 1461 aaKnown RBP12.07□□□□□ -0.48
CALCOCO2-201ENST00000258947 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
CALCOCO2-201ENST00000258947 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO2-201ENST00000258947 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
CALCOCO2-201ENST00000258947 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
CALCOCO2-201ENST00000258947 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
CALCOCO2-201ENST00000258947 MLECQ14165 292 aa12.05□□□□□ -0.48
CALCOCO2-201ENST00000258947 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
CALCOCO2-201ENST00000258947 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
CALCOCO2-201ENST00000258947 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
CALCOCO2-201ENST00000258947 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
CALCOCO2-201ENST00000258947 USP47Q96K76 1375 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms