RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PHLDB1Q86UU1 1377 aa6.08□□□□□ -1.44
RC3H1-201ENST00000258349 CALD1Q05682 793 aaKnown RBP6.08□□□□□ -1.44
RC3H1-201ENST00000258349 GOLGA2Q08379 1002 aa6.07□□□□□ -1.44
RC3H1-201ENST00000258349 IPO8O15397 1037 aaKnown RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 GNL2Q13823 731 aaKnown RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 CC2D1BQ5T0F9 858 aaKnown RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 KIAA1211Q6ZU35 1233 aa6.07□□□□□ -1.44
RC3H1-201ENST00000258349 CSPP1Q1MSJ5 1256 aa6.07□□□□□ -1.44
RC3H1-201ENST00000258349 NAP1L2Q9ULW6 460 aaPredicted RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 RBM19Q9Y4C8 960 aaKnown RBP6.07□□□□□ -1.44
RC3H1-201ENST00000258349 TCERG1O14776 1098 aaKnown RBP6.06□□□□□ -1.44
RC3H1-201ENST00000258349 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 ROCK2O75116 1388 aaKnown RBP6.06□□□□□ -1.44
RC3H1-201ENST00000258349 POGKQ9P215 609 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 GPATCH3Q96I76 525 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 FMN1Q68DA7 1419 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 NOC3LQ8WTT2 800 aaKnown RBP6.06□□□□□ -1.44
RC3H1-201ENST00000258349 TPM4P67936 248 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 RALBP1Q15311 655 aa6.06□□□□□ -1.44
RC3H1-201ENST00000258349 GOLGA6L1Q8N7Z2 621 aa6.05□□□□□ -1.44
RC3H1-201ENST00000258349 CFAP65Q6ZU64 1925 aaKnown RBP6.05□□□□□ -1.44
RC3H1-201ENST00000258349 CUX1P39880 1505 aa6.05□□□□□ -1.44
RC3H1-201ENST00000258349 SUPT6HQ7KZ85 1726 aaKnown RBP6.05□□□□□ -1.44
RC3H1-201ENST00000258349 NEUROD2Q15784 382 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 RSPH6AQ9H0K4 717 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 CUX2O14529 1486 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 CCDC18Q5T9S5 1454 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 GOLGA6L3A6NEY3 463 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 TULP1O00294 542 aaPredicted RBP6.04□□□□□ -1.44
RC3H1-201ENST00000258349 RWDD1Q9H446 243 aaPredicted RBP6.04□□□□□ -1.44
RC3H1-201ENST00000258349 PMFBP1Q8TBY8 1022 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
RC3H1-201ENST00000258349 NPHP1O15259 732 aa6.03□□□□□ -1.44
RC3H1-201ENST00000258349 CCDC34Q96HJ3 373 aa6.03□□□□□ -1.44
RC3H1-201ENST00000258349 U2SURPO15042 1029 aaKnown RBP6.03□□□□□ -1.44
RC3H1-201ENST00000258349 DDX11L8A8MPP1 907 aa6.03□□□□□ -1.44
RC3H1-201ENST00000258349 IPO9Q96P70 1041 aaKnown RBP6.03□□□□□ -1.44
RC3H1-201ENST00000258349 MORC1Q86VD1 984 aa6.03□□□□□ -1.44
RC3H1-201ENST00000258349 KCNH8Q96L42 1107 aa6.03□□□□□ -1.44
RC3H1-201ENST00000258349 SPRYD3Q8NCJ5 442 aa6.02□□□□□ -1.45
RC3H1-201ENST00000258349 CHMP4AQ9BY43 222 aa6.02□□□□□ -1.45
RC3H1-201ENST00000258349 TNNT3P45378 269 aaPredicted RBP6.02□□□□□ -1.45
RC3H1-201ENST00000258349 CCDC88BA6NC98 1476 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 KIF21BO75037 1637 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 RTF1Q92541 710 aaKnown RBP6.01□□□□□ -1.45
RC3H1-201ENST00000258349 KIF15Q9NS87 1388 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 DCAF11Q8TEB1 546 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 HDGFP51858 240 aaKnown RBP6.01□□□□□ -1.45
RC3H1-201ENST00000258349 SETQ01105 290 aaPredicted RBP6.01□□□□□ -1.45
RC3H1-201ENST00000258349 RAB3GAP2Q9H2M9 1393 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 CLSTN1O94985 981 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 CARMIL1Q5VZK9 1371 aa6.01□□□□□ -1.45
RC3H1-201ENST00000258349 ITPRIPQ8IWB1 547 aa6□□□□□ -1.45
RC3H1-201ENST00000258349 SIN3AQ96ST3 1273 aa6□□□□□ -1.45
RC3H1-201ENST00000258349 TAOK2Q9UL54 1235 aa6□□□□□ -1.45
RC3H1-201ENST00000258349 CARMIL2Q6F5E8 1435 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
RC3H1-201ENST00000258349 ST18O60284 1047 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 KIF16BQ96L93 1317 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 SENP3-EIF4A1A0A087X0R7 540 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 SENP3Q9H4L4 574 aaPredicted RBP5.99□□□□□ -1.45
RC3H1-201ENST00000258349 SPAG9O60271 1321 aaKnown RBP5.99□□□□□ -1.45
RC3H1-201ENST00000258349 HMMRO75330 724 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 HSP90AA2PQ14568 343 aaPredicted RBP5.99□□□□□ -1.45
RC3H1-201ENST00000258349 HDAC5Q9UQL6 1122 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 PLEKHG5O94827 1062 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 ANKRD30AQ9BXX3 1397 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
RC3H1-201ENST00000258349 SRPK2P78362 688 aaKnown RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 HSPA5P11021 654 aaKnown RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 PDE3BQ13370 1112 aa5.98□□□□□ -1.45
RC3H1-201ENST00000258349 SOGA1O94964 1423 aa5.98□□□□□ -1.45
RC3H1-201ENST00000258349 SKOR2Q2VWA4 1001 aaPredicted RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 MROH2BQ7Z745 1585 aa5.98□□□□□ -1.45
RC3H1-201ENST00000258349 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.98□□□□□ -1.45
RC3H1-201ENST00000258349 A0A0U1RQG5 324 aaPredicted RBP5.97□□□□□ -1.45
RC3H1-201ENST00000258349 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
RC3H1-201ENST00000258349 KIF3AQ9Y496 699 aa5.97□□□□□ -1.45
RC3H1-201ENST00000258349 SETD1BQ9UPS6 1966 aaKnown RBP5.97□□□□□ -1.45
RC3H1-201ENST00000258349 AMER1Q5JTC6 1135 aaPredicted RBP5.97□□□□□ -1.45
RC3H1-201ENST00000258349 LMOD3Q0VAK6 560 aa5.96□□□□□ -1.46
RC3H1-201ENST00000258349 CHMP4CQ96CF2 233 aa5.96□□□□□ -1.46
RC3H1-201ENST00000258349 ATP6V1DQ9Y5K8 247 aa5.96□□□□□ -1.46
RC3H1-201ENST00000258349 CENPJQ9HC77 1338 aaPredicted RBP5.96□□□□□ -1.46
RC3H1-201ENST00000258349 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.46
RC3H1-201ENST00000258349 MFAP1P55081 439 aaKnown RBP5.96□□□□□ -1.46
RC3H1-201ENST00000258349 CCDC70Q6NSX1 233 aa5.96□□□□□ -1.46
RC3H1-201ENST00000258349 CENPQQ7L2Z9 268 aaPredicted RBP5.96□□□□□ -1.46
RC3H1-201ENST00000258349 TRIM6-TRIM34B2RNG4 842 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 TPM3P06753 285 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 ZBED9Q6R2W3 1325 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 ARID3AQ99856 593 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 RAPGEF2Q9Y4G8 1499 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 GPS2Q13227 327 aa5.95□□□□□ -1.46
RC3H1-201ENST00000258349 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 SMC4Q9NTJ3 1288 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 LMOD2Q6P5Q4 547 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms