RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CDC42BPBQ9Y5S2 1711 aa27.96■■■□□ 2.07
TRIM47-201ENST00000254816 KCNH8Q96L42 1107 aa27.95■■■□□ 2.06
TRIM47-201ENST00000254816 NAIPQ13075 1403 aa27.94■■■□□ 2.06
TRIM47-201ENST00000254816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.94■■■□□ 2.06
TRIM47-201ENST00000254816 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
TRIM47-201ENST00000254816 ABCC5O15440 1437 aa27.94■■■□□ 2.06
TRIM47-201ENST00000254816 PREX2Q70Z35 1606 aa27.92■■■□□ 2.06
TRIM47-201ENST00000254816 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
TRIM47-201ENST00000254816 MYO5CQ9NQX4 1742 aa27.87■■■□□ 2.05
TRIM47-201ENST00000254816 CROCC2H7BZ55 1655 aa27.86■■■□□ 2.05
TRIM47-201ENST00000254816 KDM6BO15054 1643 aa27.84■■■□□ 2.05
TRIM47-201ENST00000254816 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
TRIM47-201ENST00000254816 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
TRIM47-201ENST00000254816 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
TRIM47-201ENST00000254816 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
TRIM47-201ENST00000254816 ARHGAP5Q13017 1502 aa27.81■■■□□ 2.04
TRIM47-201ENST00000254816 ADGBQ8N7X0 1667 aa27.8■■■□□ 2.04
TRIM47-201ENST00000254816 WDR7Q9Y4E6 1490 aa27.79■■■□□ 2.04
TRIM47-201ENST00000254816 ROCK1Q13464 1354 aa27.78■■■□□ 2.04
TRIM47-201ENST00000254816 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.04
TRIM47-201ENST00000254816 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
TRIM47-201ENST00000254816 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
TRIM47-201ENST00000254816 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
TRIM47-201ENST00000254816 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
TRIM47-201ENST00000254816 ARHGEF5Q12774 1597 aa27.71■■■□□ 2.03
TRIM47-201ENST00000254816 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
TRIM47-201ENST00000254816 NPM1P06748 294 aaKnown RBP eCLIP27.71■■■□□ 2.03
TRIM47-201ENST00000254816 PLCH2O75038 1416 aa27.7■■■□□ 2.03
TRIM47-201ENST00000254816 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.03
TRIM47-201ENST00000254816 NCOA1Q15788 1441 aa27.69■■■□□ 2.02
TRIM47-201ENST00000254816 ADGRL2O95490 1459 aa27.68■■■□□ 2.02
TRIM47-201ENST00000254816 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
TRIM47-201ENST00000254816 SHANK2Q9UPX8 1470 aa27.66■■■□□ 2.02
TRIM47-201ENST00000254816 TRIM52Q96A61 297 aa27.65■■■□□ 2.02
TRIM47-201ENST00000254816 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
TRIM47-201ENST00000254816 ABCA9Q8IUA7 1624 aa27.65■■■□□ 2.02
TRIM47-201ENST00000254816 TSPY4P0CV99 314 aa27.64■■■□□ 2.01
TRIM47-201ENST00000254816 TSPY10P0CW01 314 aa27.64■■■□□ 2.01
TRIM47-201ENST00000254816 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.01
TRIM47-201ENST00000254816 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
TRIM47-201ENST00000254816 SIN3AQ96ST3 1273 aa27.62■■■□□ 2.01
TRIM47-201ENST00000254816 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
TRIM47-201ENST00000254816 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
TRIM47-201ENST00000254816 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2.01
TRIM47-201ENST00000254816 NEUROD1Q13562 356 aa27.57■■■□□ 2
TRIM47-201ENST00000254816 ABCC1P33527 1531 aa27.57■■■□□ 2
TRIM47-201ENST00000254816 KIAA1107Q9UPP5 1409 aa27.56■■■□□ 2
TRIM47-201ENST00000254816 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
TRIM47-201ENST00000254816 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
TRIM47-201ENST00000254816 DENND4BO75064 1496 aaPredicted RBP27.55■■■□□ 2
TRIM47-201ENST00000254816 ANKRD50Q9ULJ7 1429 aa27.52■■■□□ 2
TRIM47-201ENST00000254816 MAST1Q9Y2H9 1570 aa27.52■■■□□ 2
TRIM47-201ENST00000254816 FANCAO15360 1455 aa27.51■■□□□ 1.99
TRIM47-201ENST00000254816 KIF15Q9NS87 1388 aa27.51■■□□□ 1.99
TRIM47-201ENST00000254816 MPHOSPH9Q99550 1183 aa27.51■■□□□ 1.99
TRIM47-201ENST00000254816 TRAPPC8Q9Y2L5 1435 aa27.49■■□□□ 1.99
TRIM47-201ENST00000254816 FOXD1Q16676 465 aa27.45■■□□□ 1.98
TRIM47-201ENST00000254816 PZPP20742 1482 aa27.42■■□□□ 1.98
TRIM47-201ENST00000254816 ACIN1Q9UKV3 1341 aaKnown RBP27.42■■□□□ 1.98
TRIM47-201ENST00000254816 PLXNC1O60486 1568 aa27.42■■□□□ 1.98
TRIM47-201ENST00000254816 SLC4A1APQ9BWU0 796 aaKnown RBP27.41■■□□□ 1.98
TRIM47-201ENST00000254816 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
TRIM47-201ENST00000254816 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
TRIM47-201ENST00000254816 ADGRL1O94910 1474 aa27.4■■□□□ 1.98
TRIM47-201ENST00000254816 SCAPERQ9BY12 1400 aa27.36■■□□□ 1.97
TRIM47-201ENST00000254816 SPAG9O60271 1321 aaKnown RBP27.34■■□□□ 1.97
TRIM47-201ENST00000254816 ZNF316A6NFI3 1004 aaPredicted RBP27.33■■□□□ 1.97
TRIM47-201ENST00000254816 NUP155O75694 1391 aa27.33■■□□□ 1.97
TRIM47-201ENST00000254816 ZFYVE16Q7Z3T8 1539 aa27.32■■□□□ 1.96
TRIM47-201ENST00000254816 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
TRIM47-201ENST00000254816 TONSLQ96HA7 1378 aa27.31■■□□□ 1.96
TRIM47-201ENST00000254816 DUOX2Q9NRD8 1548 aa27.31■■□□□ 1.96
TRIM47-201ENST00000254816 TIMELESSQ9UNS1 1208 aa27.3■■□□□ 1.96
TRIM47-201ENST00000254816 KDM5DQ9BY66 1539 aa27.28■■□□□ 1.96
TRIM47-201ENST00000254816 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
TRIM47-201ENST00000254816 MAP3K4Q9Y6R4 1608 aa27.28■■□□□ 1.96
TRIM47-201ENST00000254816 INO80Q9ULG1 1556 aaPredicted RBP27.28■■□□□ 1.96
TRIM47-201ENST00000254816 RTEL1-TNFRSF6BF6WH68 1400 aa27.27■■□□□ 1.96
TRIM47-201ENST00000254816 ATP7AQ04656 1500 aa27.27■■□□□ 1.96
TRIM47-201ENST00000254816 PKD2Q13563 968 aa27.27■■□□□ 1.96
TRIM47-201ENST00000254816 DIEXFQ68CQ4 756 aaKnown RBP27.27■■□□□ 1.96
TRIM47-201ENST00000254816 UNC13BO14795 1591 aa27.25■■□□□ 1.95
TRIM47-201ENST00000254816 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
TRIM47-201ENST00000254816 PPP1R15AO75807 674 aaPredicted RBP27.23■■□□□ 1.95
TRIM47-201ENST00000254816 ERBINQ96RT1 1412 aa27.22■■□□□ 1.95
TRIM47-201ENST00000254816 GLI2P10070 1586 aa27.22■■□□□ 1.95
TRIM47-201ENST00000254816 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
TRIM47-201ENST00000254816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
TRIM47-201ENST00000254816 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
TRIM47-201ENST00000254816 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.95
TRIM47-201ENST00000254816 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
TRIM47-201ENST00000254816 FAM69CQ0P6D2 419 aa27.19■■□□□ 1.94
TRIM47-201ENST00000254816 TSPOAP1O95153 1857 aa27.18■■□□□ 1.94
TRIM47-201ENST00000254816 RPRD2Q5VT52 1461 aaKnown RBP27.17■■□□□ 1.94
TRIM47-201ENST00000254816 NEO1Q92859 1461 aa27.17■■□□□ 1.94
TRIM47-201ENST00000254816 POGZQ7Z3K3 1410 aa27.16■■□□□ 1.94
TRIM47-201ENST00000254816 IQGAP3Q86VI3 1631 aa27.15■■□□□ 1.94
TRIM47-201ENST00000254816 KDM5CP41229 1560 aa27.14■■□□□ 1.93
TRIM47-201ENST00000254816 MAGI2Q86UL8 1455 aa27.12■■□□□ 1.93
TRIM47-201ENST00000254816 RAPGEF3O95398 923 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms