RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 DNMT1P26358 1616 aaKnown RBP27.94■■■□□ 2.06
KRT1-201ENST00000252244 ABCC5O15440 1437 aa27.94■■■□□ 2.06
KRT1-201ENST00000252244 KDM5BQ9UGL1 1544 aa27.9■■■□□ 2.06
KRT1-201ENST00000252244 ROCK1Q13464 1354 aa27.89■■■□□ 2.06
KRT1-201ENST00000252244 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
KRT1-201ENST00000252244 KIF14Q15058 1648 aa27.89■■■□□ 2.06
KRT1-201ENST00000252244 KCNH8Q96L42 1107 aa27.86■■■□□ 2.05
KRT1-201ENST00000252244 CFDP1Q9UEE9 299 aaPredicted RBP27.85■■■□□ 2.05
KRT1-201ENST00000252244 FOXD1Q16676 465 aa27.84■■■□□ 2.05
KRT1-201ENST00000252244 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
KRT1-201ENST00000252244 ITSN2Q9NZM3 1697 aa27.83■■■□□ 2.05
KRT1-201ENST00000252244 GPATCH8Q9UKJ3 1502 aaKnown RBP27.83■■■□□ 2.05
KRT1-201ENST00000252244 ADCY10Q96PN6 1610 aa27.83■■■□□ 2.05
KRT1-201ENST00000252244 ABCA8O94911 1581 aa27.8■■■□□ 2.04
KRT1-201ENST00000252244 ZNF777Q9ULD5 760 aaPredicted RBP27.8■■■□□ 2.04
KRT1-201ENST00000252244 ATP10BO94823 1461 aa27.75■■■□□ 2.03
KRT1-201ENST00000252244 PLEKHD1A6NEE1 506 aa27.74■■■□□ 2.03
KRT1-201ENST00000252244 ADGBQ8N7X0 1667 aa27.7■■■□□ 2.02
KRT1-201ENST00000252244 NCOA1Q15788 1441 aa27.7■■■□□ 2.02
KRT1-201ENST00000252244 SLC4A1APQ9BWU0 796 aaKnown RBP27.69■■■□□ 2.02
KRT1-201ENST00000252244 ANKRD30BQ9BXX2 1392 aa27.69■■■□□ 2.02
KRT1-201ENST00000252244 L3MBTL2Q969R5 705 aa27.69■■■□□ 2.02
KRT1-201ENST00000252244 CDC42BPAQ5VT25 1732 aa27.69■■■□□ 2.02
KRT1-201ENST00000252244 CROCC2H7BZ55 1655 aa27.68■■■□□ 2.02
KRT1-201ENST00000252244 CHD1O14646 1710 aa27.66■■■□□ 2.02
KRT1-201ENST00000252244 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
KRT1-201ENST00000252244 PTPRGP23470 1445 aa27.65■■■□□ 2.02
KRT1-201ENST00000252244 ANP32CO43423 234 aa27.64■■■□□ 2.01
KRT1-201ENST00000252244 ADGRL2O95490 1459 aa27.63■■■□□ 2.01
KRT1-201ENST00000252244 RPRD2Q5VT52 1461 aaKnown RBP27.63■■■□□ 2.01
KRT1-201ENST00000252244 HSPA5P11021 654 aaKnown RBP27.62■■■□□ 2.01
KRT1-201ENST00000252244 PZPP20742 1482 aa27.62■■■□□ 2.01
KRT1-201ENST00000252244 ANKRD30AQ9BXX3 1397 aa27.59■■■□□ 2.01
KRT1-201ENST00000252244 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
KRT1-201ENST00000252244 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
KRT1-201ENST00000252244 EIF4G2P78344 907 aaKnown RBP eCLIP27.55■■■□□ 2
KRT1-201ENST00000252244 CCER2I3L3R5 266 aa27.55■■■□□ 2
KRT1-201ENST00000252244 WASHC2AQ641Q2 1341 aa27.53■■■□□ 2
KRT1-201ENST00000252244 NBPF8Q3BBV2 869 aa27.52■■■□□ 2
KRT1-201ENST00000252244 ANKRD50Q9ULJ7 1429 aa27.52■■■□□ 2
KRT1-201ENST00000252244 C9orf84Q5VXU9 1444 aa27.52■■■□□ 2
KRT1-201ENST00000252244 SHANK2Q9UPX8 1470 aa27.49■■□□□ 1.99
KRT1-201ENST00000252244 HNRNPMP52272 730 aaKnown RBP eCLIP27.48■■□□□ 1.99
KRT1-201ENST00000252244 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
KRT1-201ENST00000252244 KIAA1107Q9UPP5 1409 aa27.47■■□□□ 1.99
KRT1-201ENST00000252244 PKD2Q13563 968 aa27.47■■□□□ 1.99
KRT1-201ENST00000252244 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
KRT1-201ENST00000252244 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
KRT1-201ENST00000252244 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
KRT1-201ENST00000252244 CDC42BPBQ9Y5S2 1711 aa27.43■■□□□ 1.98
KRT1-201ENST00000252244 SUPT16HQ9Y5B9 1047 aaKnown RBP27.43■■□□□ 1.98
KRT1-201ENST00000252244 MBD5Q9P267 1494 aa27.41■■□□□ 1.98
KRT1-201ENST00000252244 SAMD9LQ8IVG5 1584 aa27.41■■□□□ 1.98
KRT1-201ENST00000252244 NUP155O75694 1391 aa27.4■■□□□ 1.98
KRT1-201ENST00000252244 PREX2Q70Z35 1606 aa27.4■■□□□ 1.98
KRT1-201ENST00000252244 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
KRT1-201ENST00000252244 C11orf95C9JLR9 678 aaPredicted RBP27.4■■□□□ 1.98
KRT1-201ENST00000252244 KIF15Q9NS87 1388 aa27.39■■□□□ 1.97
KRT1-201ENST00000252244 CCDC141Q6ZP82 1450 aa27.35■■□□□ 1.97
KRT1-201ENST00000252244 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
KRT1-201ENST00000252244 CCDC7Q96M83 1385 aa27.34■■□□□ 1.97
KRT1-201ENST00000252244 ABCC2Q92887 1545 aa27.33■■□□□ 1.97
KRT1-201ENST00000252244 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
KRT1-201ENST00000252244 CNTLNQ9NXG0 1405 aa27.32■■□□□ 1.96
KRT1-201ENST00000252244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.31■■□□□ 1.96
KRT1-201ENST00000252244 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
KRT1-201ENST00000252244 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
KRT1-201ENST00000252244 KDM5DQ9BY66 1539 aa27.3■■□□□ 1.96
KRT1-201ENST00000252244 SYCP2Q9BX26 1530 aa27.29■■□□□ 1.96
KRT1-201ENST00000252244 RSPH4AQ5TD94 716 aa27.25■■□□□ 1.95
KRT1-201ENST00000252244 KIF7Q2M1P5 1343 aa27.24■■□□□ 1.95
KRT1-201ENST00000252244 POLR1AO95602 1720 aaPredicted RBP27.22■■□□□ 1.95
KRT1-201ENST00000252244 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
KRT1-201ENST00000252244 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
KRT1-201ENST00000252244 USP47Q96K76 1375 aa27.19■■□□□ 1.94
KRT1-201ENST00000252244 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
KRT1-201ENST00000252244 ZCCHC11Q5TAX3 1644 aaKnown RBP27.17■■□□□ 1.94
KRT1-201ENST00000252244 MAST1Q9Y2H9 1570 aa27.16■■□□□ 1.94
KRT1-201ENST00000252244 PRKRIP1Q9H875 184 aaPredicted RBP27.15■■□□□ 1.94
KRT1-201ENST00000252244 UHRF1BP1Q6BDS2 1440 aa27.14■■□□□ 1.94
KRT1-201ENST00000252244 CCDC184Q52MB2 194 aa27.14■■□□□ 1.94
KRT1-201ENST00000252244 BCORL1Q5H9F3 1711 aa27.13■■□□□ 1.93
KRT1-201ENST00000252244 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
KRT1-201ENST00000252244 ARHGEF12Q9NZN5 1544 aa27.13■■□□□ 1.93
KRT1-201ENST00000252244 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
KRT1-201ENST00000252244 KDM5CP41229 1560 aa27.12■■□□□ 1.93
KRT1-201ENST00000252244 FKBP8Q14318 412 aa27.12■■□□□ 1.93
KRT1-201ENST00000252244 PLEKHH2Q8IVE3 1493 aa27.11■■□□□ 1.93
KRT1-201ENST00000252244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.1■■□□□ 1.93
KRT1-201ENST00000252244 RALGAPBQ86X10 1494 aa27.1■■□□□ 1.93
KRT1-201ENST00000252244 UHRF1BP1LA0JNW5 1464 aa27.1■■□□□ 1.93
KRT1-201ENST00000252244 DCAF11Q8TEB1 546 aa27.09■■□□□ 1.93
KRT1-201ENST00000252244 BCANQ96GW7 911 aa27.08■■□□□ 1.93
KRT1-201ENST00000252244 POLR3GLQ9BT43 218 aa27.08■■□□□ 1.93
KRT1-201ENST00000252244 PLCH2O75038 1416 aa27.08■■□□□ 1.93
KRT1-201ENST00000252244 UNC13BO14795 1591 aa27.08■■□□□ 1.93
KRT1-201ENST00000252244 PLXNC1O60486 1568 aa27.08■■□□□ 1.93
KRT1-201ENST00000252244 CARD11Q9BXL7 1154 aa27.06■■□□□ 1.92
KRT1-201ENST00000252244 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
KRT1-201ENST00000252244 MRS2Q9HD23 443 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms